RNA–Protein interactions for RNA: ENSMUST00000013771.14

Trim54-201, Transcript of Tripartite motif-containing protein 54, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Trim54, Length 1,434 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim54-201ENSMUST00000013771 Zfp951A0A087WRH0 451 aa11.01□□□□□ -0.65
Trim54-201ENSMUST00000013771 C920008G01RikA0A0B4J1N1 112 aa11.01□□□□□ -0.65
Trim54-201ENSMUST00000013771 Gm9513B3GLJ6 99 aa11.01□□□□□ -0.65
Trim54-201ENSMUST00000013771 Vps25Q9CQ80 176 aa11.01□□□□□ -0.65
Trim54-201ENSMUST00000013771 Tmem223Q9CQE2 199 aaKnown RBP11.01□□□□□ -0.65
Trim54-201ENSMUST00000013771 Gm10542F6XDR3 90 aa11.01□□□□□ -0.65
Trim54-201ENSMUST00000013771 Prh1P05142 261 aa11.01□□□□□ -0.65
Trim54-201ENSMUST00000013771 Tm2d2Q8R0I4 213 aa11.01□□□□□ -0.65
Trim54-201ENSMUST00000013771 1700010B08RikQ9DAI7 102 aa11.01□□□□□ -0.65
Trim54-201ENSMUST00000013771 P01823 113 aa11□□□□□ -0.65
Trim54-201ENSMUST00000013771 Odf3l2Q3TZ65 277 aa11□□□□□ -0.65
Trim54-201ENSMUST00000013771 Morn5Q9DAI9 170 aa10.99□□□□□ -0.65
Trim54-201ENSMUST00000013771 Gm26727M0QWT1 121 aa10.98□□□□□ -0.65
Trim54-201ENSMUST00000013771 Rbx1P62878 108 aa10.98□□□□□ -0.65
Trim54-201ENSMUST00000013771 MturnQ8CGA4 131 aa10.98□□□□□ -0.65
Trim54-201ENSMUST00000013771 4930556J24RikQ9D4U7 146 aa10.98□□□□□ -0.65
Trim54-201ENSMUST00000013771 Rmi2Q3UPE3 149 aa10.97□□□□□ -0.65
Trim54-201ENSMUST00000013771 Cd33Q63994 403 aa10.97□□□□□ -0.65
Trim54-201ENSMUST00000013771 Pxt1Q8K459 51 aa10.97□□□□□ -0.65
Trim54-201ENSMUST00000013771 Igkv3-12A0A140T8P0 119 aa10.96□□□□□ -0.65
Trim54-201ENSMUST00000013771 Rpl32-psP17932 135 aa10.96□□□□□ -0.65
Trim54-201ENSMUST00000013771 RetnlbQ99P86 105 aa10.96□□□□□ -0.65
Trim54-201ENSMUST00000013771 Fgf23Q9EPC2 251 aa10.96□□□□□ -0.65
Trim54-201ENSMUST00000013771 Gm20730A0A075B5J6 119 aa10.95□□□□□ -0.66
Trim54-201ENSMUST00000013771 CckP09240 115 aa10.95□□□□□ -0.66
Trim54-201ENSMUST00000013771 4930432M17RikQ3V0W9 174 aa10.95□□□□□ -0.66
Trim54-201ENSMUST00000013771 Sprr1bQ62267 153 aa10.94□□□□□ -0.66
Trim54-201ENSMUST00000013771 Zfand2aQ9JII7 171 aa10.94□□□□□ -0.66
Trim54-201ENSMUST00000013771 Glrp1E9Q9S8 174 aa10.93□□□□□ -0.66
Trim54-201ENSMUST00000013771 Gm11444F6QMA6 170 aa10.93□□□□□ -0.66
Trim54-201ENSMUST00000013771 Vpreb2P13373 142 aa10.93□□□□□ -0.66
Trim54-201ENSMUST00000013771 Gm10577Q3UDV9 132 aa10.93□□□□□ -0.66
Trim54-201ENSMUST00000013771 Slamf6Q9ET39 351 aa10.93□□□□□ -0.66
Trim54-201ENSMUST00000013771 Lrp1Q91ZX7 4545 aaKnown RBP10.92□□□□□ -0.66
Trim54-201ENSMUST00000013771 Defa3P28310 93 aa10.91□□□□□ -0.66
Trim54-201ENSMUST00000013771 Defa10P50708 93 aa10.91□□□□□ -0.66
Trim54-201ENSMUST00000013771 Ighv2-9-1A0A075B697 116 aa10.9□□□□□ -0.66
Trim54-201ENSMUST00000013771 Gm45213A0A0U1RNZ6 101 aa10.9□□□□□ -0.66
Trim54-201ENSMUST00000013771 CnbpP53996 178 aaKnown RBP10.9□□□□□ -0.66
Trim54-201ENSMUST00000013771 NrepQ07475 68 aa10.9□□□□□ -0.66
Trim54-201ENSMUST00000013771 Mzt1Q8BUR9 78 aa10.9□□□□□ -0.66
Trim54-201ENSMUST00000013771 Gtf2h5Q8K2X8 71 aa10.9□□□□□ -0.66
Trim54-201ENSMUST00000013771 Spink13Q3UTS8 97 aa10.89□□□□□ -0.67
Trim54-201ENSMUST00000013771 Rab37Q9JKM7 223 aa10.89□□□□□ -0.67
Trim54-201ENSMUST00000013771 Krtap11-1E9Q2E9 183 aa10.88□□□□□ -0.67
Trim54-201ENSMUST00000013771 Try10Q792Z1 246 aaKnown RBP10.88□□□□□ -0.67
Trim54-201ENSMUST00000013771 Gm26920S4R2A5 56 aa10.88□□□□□ -0.67
Trim54-201ENSMUST00000013771 Ighv2-9A0A075B5Q5 116 aa10.87□□□□□ -0.67
Trim54-201ENSMUST00000013771 Trav7-6A0A075B640 112 aa10.87□□□□□ -0.67
Trim54-201ENSMUST00000013771 Trav11A0A0B4J1J9 114 aa10.87□□□□□ -0.67
Trim54-201ENSMUST00000013771 Hint1P70349 126 aaKnown RBP10.87□□□□□ -0.67
Trim54-201ENSMUST00000013771 Lrp1bQ9JI18 4599 aa10.86□□□□□ -0.67
Trim54-201ENSMUST00000013771 Rpl37aP61514 92 aa10.86□□□□□ -0.67
Trim54-201ENSMUST00000013771 Prss58Q8BW11 241 aa10.86□□□□□ -0.67
Trim54-201ENSMUST00000013771 BB014433Q8C5R5 389 aa10.86□□□□□ -0.67
Trim54-201ENSMUST00000013771 Lage3Q9CR70 148 aa10.86□□□□□ -0.67
Trim54-201ENSMUST00000013771 Trav13-4-dv7A0A075B6C2 110 aa10.85□□□□□ -0.67
Trim54-201ENSMUST00000013771 Igf1P05017 153 aa10.85□□□□□ -0.67
Trim54-201ENSMUST00000013771 4930415O20RikQ8CDT5 131 aa10.85□□□□□ -0.67
Trim54-201ENSMUST00000013771 Fat2Q5F226 4351 aa10.84□□□□□ -0.67
Trim54-201ENSMUST00000013771 Defb50Q6TU36 73 aa10.84□□□□□ -0.67
Trim54-201ENSMUST00000013771 Gpr15lA0A0B4J1N3 78 aa10.83□□□□□ -0.68
Trim54-201ENSMUST00000013771 Trav13d-4A0A0G2JFX3 110 aa10.83□□□□□ -0.68
Trim54-201ENSMUST00000013771 Gm11213A0A1B0GR83 88 aa10.83□□□□□ -0.68
Trim54-201ENSMUST00000013771 4930519P11RikQ9CUJ8 166 aa10.83□□□□□ -0.68
Trim54-201ENSMUST00000013771 Lrp2A2ARV4 4660 aa10.82□□□□□ -0.68
Trim54-201ENSMUST00000013771 1700011M02RikB1AX35 88 aa10.82□□□□□ -0.68
Trim54-201ENSMUST00000013771 Fam240bJ3QMB3 78 aa10.82□□□□□ -0.68
Trim54-201ENSMUST00000013771 Wdr38Q9D994 303 aa10.82□□□□□ -0.68
Trim54-201ENSMUST00000013771 Igkv4-92A0A0B4J1I2 117 aa10.81□□□□□ -0.68
Trim54-201ENSMUST00000013771 Gm10065F6TJM2 114 aa10.81□□□□□ -0.68
Trim54-201ENSMUST00000013771 Ndufa12Q7TMF3 145 aaKnown RBP10.81□□□□□ -0.68
Trim54-201ENSMUST00000013771 Igkv3-2A0A075B5P0 119 aa10.8□□□□□ -0.68
Trim54-201ENSMUST00000013771 Igkv6-13A0A0G2JGY3 119 aa10.8□□□□□ -0.68
Trim54-201ENSMUST00000013771 Tcl1b3P56842 122 aa10.8□□□□□ -0.68
Trim54-201ENSMUST00000013771 Tcl1b5P56845 121 aa10.8□□□□□ -0.68
Trim54-201ENSMUST00000013771 Gm10549Q3URY4 149 aa10.8□□□□□ -0.68
Trim54-201ENSMUST00000013771 Ube2wQ8VDW4 151 aa10.8□□□□□ -0.68
Trim54-201ENSMUST00000013771 Cox6cQ9CPQ1 76 aa10.8□□□□□ -0.68
Trim54-201ENSMUST00000013771 Trav9d-4A0A0G2JG37 103 aa10.79□□□□□ -0.68
Trim54-201ENSMUST00000013771 Lst1O08843 95 aa10.79□□□□□ -0.68
Trim54-201ENSMUST00000013771 Sostdc1Q9CQN4 206 aa10.79□□□□□ -0.68
Trim54-201ENSMUST00000013771 Znf414Q9DCK4 299 aa10.79□□□□□ -0.68
Trim54-201ENSMUST00000013771 MalO09198 153 aa10.78□□□□□ -0.68
Trim54-201ENSMUST00000013771 Prp2P05143 317 aa10.78□□□□□ -0.68
Trim54-201ENSMUST00000013771 Tmem86bQ497J1 226 aa10.78□□□□□ -0.68
Trim54-201ENSMUST00000013771 Trav9n-4A0A075B631 113 aa10.77□□□□□ -0.68
Trim54-201ENSMUST00000013771 Krtap29-1A2A5X4 342 aa10.77□□□□□ -0.68
Trim54-201ENSMUST00000013771 Gm5617Q91VN2 117 aa10.77□□□□□ -0.68
Trim54-201ENSMUST00000013771 Gm867A0A1W2P7T4 151 aa10.76□□□□□ -0.69
Trim54-201ENSMUST00000013771 Gm11020F6ZGD5 61 aa10.75□□□□□ -0.69
Trim54-201ENSMUST00000013771 Prm1P02319 51 aa10.75□□□□□ -0.69
Trim54-201ENSMUST00000013771 Cks1bP61025 79 aa10.75□□□□□ -0.69
Trim54-201ENSMUST00000013771 SpinklQ8CEK3 90 aa10.75□□□□□ -0.69
Trim54-201ENSMUST00000013771 Phpt1Q9DAK9 124 aa10.75□□□□□ -0.69
Trim54-201ENSMUST00000013771 CenpwQ3URR0 86 aa10.75□□□□□ -0.69
Trim54-201ENSMUST00000013771 4930544G11RikQ9CR99 193 aa10.75□□□□□ -0.69
Trim54-201ENSMUST00000013771 P01755 137 aa10.74□□□□□ -0.69
Trim54-201ENSMUST00000013771 Defb47Q30KN1 79 aa10.74□□□□□ -0.69
Trim54-201ENSMUST00000013771 Gm10735Q3US96 136 aa10.73□□□□□ -0.69
Retrieved 100 of 22,080 RNA–protein pairs in 95.2 ms