RNA–Protein interactions for RNA: ENSMUST00000005630.10

Msh4-201, Transcript of MutS protein homolog 4, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Msh4, Length 3,325 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msh4-201ENSMUST00000005630 Rpl39lQ9CQD0 51 aa8.65□□□□□ -1.02
Msh4-201ENSMUST00000005630 Gm11213A0A1B0GR83 88 aa8.65□□□□□ -1.03
Msh4-201ENSMUST00000005630 Smim26Q3V460 107 aa8.63□□□□□ -1.03
Msh4-201ENSMUST00000005630 EnhoQ8K1D8 76 aa8.63□□□□□ -1.03
Msh4-201ENSMUST00000005630 AtrQ9JKK8 2635 aa8.63□□□□□ -1.03
Msh4-201ENSMUST00000005630 Trav3-4A0A075B654 114 aa8.63□□□□□ -1.03
Msh4-201ENSMUST00000005630 Ighv8-11A0A075B5X4 119 aa8.62□□□□□ -1.03
Msh4-201ENSMUST00000005630 P01819 144 aa8.62□□□□□ -1.03
Msh4-201ENSMUST00000005630 Csdc2Q91YQ3 154 aa8.62□□□□□ -1.03
Msh4-201ENSMUST00000005630 Gm7138L7N2C3 230 aa8.61□□□□□ -1.03
Msh4-201ENSMUST00000005630 Tcl1b3P56842 122 aa8.61□□□□□ -1.03
Msh4-201ENSMUST00000005630 Tmem86bQ497J1 226 aa8.61□□□□□ -1.03
Msh4-201ENSMUST00000005630 Apoc4Q61268 124 aa8.61□□□□□ -1.03
Msh4-201ENSMUST00000005630 Cystm1Q8K353 104 aa8.61□□□□□ -1.03
Msh4-201ENSMUST00000005630 Gm3238W4VSP7 230 aa8.61□□□□□ -1.03
Msh4-201ENSMUST00000005630 Klk12B2RVZ0 247 aa8.6□□□□□ -1.03
Msh4-201ENSMUST00000005630 Csmd3Q80T79 3707 aa8.6□□□□□ -1.03
Msh4-201ENSMUST00000005630 Dnah10D3YYQ8 4591 aa8.6□□□□□ -1.03
Msh4-201ENSMUST00000005630 Ighv2-9A0A075B5Q5 116 aa8.6□□□□□ -1.03
Msh4-201ENSMUST00000005630 Gm867A0A1W2P7T4 151 aa8.6□□□□□ -1.03
Msh4-201ENSMUST00000005630 Dnal4Q9DCM4 105 aa8.6□□□□□ -1.03
Msh4-201ENSMUST00000005630 Dnah7bL7N1Y0 4068 aa8.6□□□□□ -1.03
Msh4-201ENSMUST00000005630 Ighv8-13A0A075B5Y0 101 aa8.6□□□□□ -1.03
Msh4-201ENSMUST00000005630 Gm10518F6UQQ9 182 aa8.6□□□□□ -1.03
Msh4-201ENSMUST00000005630 Q9DAA7 145 aa8.6□□□□□ -1.03
Msh4-201ENSMUST00000005630 Gm28539A0A087WSL9 92 aa8.59□□□□□ -1.03
Msh4-201ENSMUST00000005630 Gm7102J3QQ10 178 aa8.59□□□□□ -1.03
Msh4-201ENSMUST00000005630 4930556J24RikQ9D4U7 146 aa8.59□□□□□ -1.03
Msh4-201ENSMUST00000005630 Dnah6E9Q0B6 4144 aa8.59□□□□□ -1.03
Msh4-201ENSMUST00000005630 Mzt1Q8BUR9 78 aa8.59□□□□□ -1.03
Msh4-201ENSMUST00000005630 BB014433Q8C5R5 389 aa8.59□□□□□ -1.03
Msh4-201ENSMUST00000005630 Igkv2-109A0A075B5K6 120 aa8.59□□□□□ -1.04
Msh4-201ENSMUST00000005630 Hist1h4aP62806 103 aaKnown RBP8.59□□□□□ -1.04
Msh4-201ENSMUST00000005630 E130208F15RikQ3UPV3 143 aa8.59□□□□□ -1.04
Msh4-201ENSMUST00000005630 Cox7bP56393 80 aa8.58□□□□□ -1.04
Msh4-201ENSMUST00000005630 Snhg11Q4G0K9 87 aa8.58□□□□□ -1.04
Msh4-201ENSMUST00000005630 Srrm2Q8BTI8 2703 aaKnown RBP8.58□□□□□ -1.04
Msh4-201ENSMUST00000005630 Igkv4-58A0A0G2JGI6 119 aa8.57□□□□□ -1.04
Msh4-201ENSMUST00000005630 Igkv8-24A0A140T8P5 121 aa8.57□□□□□ -1.04
Msh4-201ENSMUST00000005630 Defa1P11477 93 aa8.57□□□□□ -1.04
Msh4-201ENSMUST00000005630 Cmc4Q61908 68 aa8.57□□□□□ -1.04
Msh4-201ENSMUST00000005630 Igkv8-16A0A0G2JDG9 121 aa8.57□□□□□ -1.04
Msh4-201ENSMUST00000005630 Igf1P05017 153 aa8.57□□□□□ -1.04
Msh4-201ENSMUST00000005630 Gm9903Q8C9Y8 129 aa8.57□□□□□ -1.04
Msh4-201ENSMUST00000005630 Notch2O35516 2470 aa8.57□□□□□ -1.04
Msh4-201ENSMUST00000005630 Hbb-b2P02089 147 aa8.57□□□□□ -1.04
Msh4-201ENSMUST00000005630 Phxr5P08399 672 aa8.56□□□□□ -1.04
Msh4-201ENSMUST00000005630 AY074887Q8R5F9 132 aa8.56□□□□□ -1.04
Msh4-201ENSMUST00000005630 Dnah1E9Q8T7 4250 aa8.56□□□□□ -1.04
Msh4-201ENSMUST00000005630 Gm10770F7D043 238 aa8.55□□□□□ -1.04
Msh4-201ENSMUST00000005630 PkigO70139 76 aa8.55□□□□□ -1.04
Msh4-201ENSMUST00000005630 Defa20Q45VN2 95 aa8.54□□□□□ -1.04
Msh4-201ENSMUST00000005630 Ighv10-3A0A075B5T6 119 aa8.54□□□□□ -1.04
Msh4-201ENSMUST00000005630 Gm9805F6YK59 57 aa8.54□□□□□ -1.04
Msh4-201ENSMUST00000005630 Reg3dQ9QUS9 175 aa8.54□□□□□ -1.04
Msh4-201ENSMUST00000005630 7530416G11RikJ3QJX6 159 aa8.54□□□□□ -1.04
Msh4-201ENSMUST00000005630 Tcl1b5P56845 121 aa8.54□□□□□ -1.04
Msh4-201ENSMUST00000005630 Ntn5Q3UQ22 452 aa8.54□□□□□ -1.04
Msh4-201ENSMUST00000005630 4930535I16RikQ9CUI2 172 aa8.54□□□□□ -1.04
Msh4-201ENSMUST00000005630 Hivep1Q03172 2688 aa8.54□□□□□ -1.04
Msh4-201ENSMUST00000005630 Igkv8-27A0A0G2JF28 120 aa8.53□□□□□ -1.04
Msh4-201ENSMUST00000005630 Igkv8-30A0A140T8M3 121 aa8.53□□□□□ -1.04
Msh4-201ENSMUST00000005630 Rpl18aP62717 176 aaKnown RBP8.53□□□□□ -1.04
Msh4-201ENSMUST00000005630 Ube2d4D3YUH6 135 aa8.53□□□□□ -1.04
Msh4-201ENSMUST00000005630 VwfQ8CIZ8 2813 aa8.52□□□□□ -1.04
Msh4-201ENSMUST00000005630 Stab1Q8R4Y4 2571 aa8.52□□□□□ -1.05
Msh4-201ENSMUST00000005630 A730009L09RikA0A1B0GS82 72 aa8.52□□□□□ -1.05
Msh4-201ENSMUST00000005630 Defa16P50714 93 aa8.52□□□□□ -1.05
Msh4-201ENSMUST00000005630 Igkv3-1A0A075B5P1 119 aa8.52□□□□□ -1.05
Msh4-201ENSMUST00000005630 A0A286YCN5 57 aa8.52□□□□□ -1.05
Msh4-201ENSMUST00000005630 Dnah14A0A140LIJ4 4489 aa8.51□□□□□ -1.05
Msh4-201ENSMUST00000005630 Igkv8-21A0A140T8P7 120 aa8.51□□□□□ -1.05
Msh4-201ENSMUST00000005630 Smim20D3Z7Q2 69 aa8.51□□□□□ -1.05
Msh4-201ENSMUST00000005630 ScxQ64124 207 aa8.51□□□□□ -1.05
Msh4-201ENSMUST00000005630 Msrb1Q9JLC3 116 aa8.5□□□□□ -1.05
Msh4-201ENSMUST00000005630 Ighv13-2A0A0A6YWN3 119 aa8.5□□□□□ -1.05
Msh4-201ENSMUST00000005630 Defa25Q5G864 92 aa8.5□□□□□ -1.05
Msh4-201ENSMUST00000005630 Gm17509Q9CZ61 145 aa8.5□□□□□ -1.05
Msh4-201ENSMUST00000005630 Mrpl52Q9D0Y8 121 aa8.49□□□□□ -1.05
Msh4-201ENSMUST00000005630 Gm10308Q9CVR5 141 aa8.49□□□□□ -1.05
Msh4-201ENSMUST00000005630 Gm36176A0A1W2P8D5 158 aa8.48□□□□□ -1.05
Msh4-201ENSMUST00000005630 2310034G01RikA0A286YDL3 209 aa8.48□□□□□ -1.05
Msh4-201ENSMUST00000005630 Igkv4-92A0A0B4J1I2 117 aa8.48□□□□□ -1.05
Msh4-201ENSMUST00000005630 Ighv10-1A0A0B4J1J6 119 aa8.48□□□□□ -1.05
Msh4-201ENSMUST00000005630 A730071L15RikQ8C4X0 137 aa8.47□□□□□ -1.05
Msh4-201ENSMUST00000005630 Igkv8-26A0A075B5N5 123 aa8.47□□□□□ -1.05
Msh4-201ENSMUST00000005630 Notch1Q01705 2531 aa8.46□□□□□ -1.05
Msh4-201ENSMUST00000005630 Dnah17Q69Z23 4481 aa8.46□□□□□ -1.06
Msh4-201ENSMUST00000005630 Ufsp1Q9CZP0 217 aa8.46□□□□□ -1.06
Msh4-201ENSMUST00000005630 AplnQ9R0R4 77 aa8.46□□□□□ -1.06
Msh4-201ENSMUST00000005630 Fn1P11276 2477 aaKnown RBP8.45□□□□□ -1.06
Msh4-201ENSMUST00000005630 E130218I03RikA0A0U1RNU5 63 aa8.45□□□□□ -1.06
Msh4-201ENSMUST00000005630 Reg3bP35230 175 aa8.45□□□□□ -1.06
Msh4-201ENSMUST00000005630 Smim29Q8R043 75 aa8.45□□□□□ -1.06
Msh4-201ENSMUST00000005630 Col6a5A6H584 2640 aa8.45□□□□□ -1.06
Msh4-201ENSMUST00000005630 Defa2P28309 93 aa8.44□□□□□ -1.06
Msh4-201ENSMUST00000005630 Sprr4Q8CGN8 76 aa8.44□□□□□ -1.06
Msh4-201ENSMUST00000005630 FlnbQ80X90 2602 aaKnown RBP8.44□□□□□ -1.06
Msh4-201ENSMUST00000005630 Gm3618D3Z4P5 127 aa8.44□□□□□ -1.06
Msh4-201ENSMUST00000005630 Gm7137J3QMW1 236 aa8.44□□□□□ -1.06
Retrieved 100 of 22,080 RNA–protein pairs in 66.3 ms