RNA–Protein interactions for RNA: ENSMUST00000208058.1

Pcf11-204, Transcript of Cleavage and polyadenylation factor subunit homolog (S. cerevisiae), mousemouse

TSL 5 BASIC

Gene Pcf11, Length 461 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcf11-204ENSMUST00000208058 Trav14-1A0A0G2JF94 121 aa13.22□□□□□ -0.29
Pcf11-204ENSMUST00000208058 Esp24A8R0V6 68 aa13.22□□□□□ -0.29
Pcf11-204ENSMUST00000208058 Zfand2aQ9JII7 171 aa13.22□□□□□ -0.29
Pcf11-204ENSMUST00000208058 9430015G10RikA2ASP7 199 aa13.21□□□□□ -0.29
Pcf11-204ENSMUST00000208058 Gm45521A0A1B0GRK0 198 aa13.2□□□□□ -0.3
Pcf11-204ENSMUST00000208058 Gm7735D3YX18 52 aa13.2□□□□□ -0.3
Pcf11-204ENSMUST00000208058 A530084C06RikQ3UTW2 186 aa13.2□□□□□ -0.3
Pcf11-204ENSMUST00000208058 Ush2AQ2QI47 5193 aa13.2□□□□□ -0.3
Pcf11-204ENSMUST00000208058 Trav11A0A0B4J1J9 114 aa13.19□□□□□ -0.3
Pcf11-204ENSMUST00000208058 Phf5aP83870 110 aaKnown RBP13.19□□□□□ -0.3
Pcf11-204ENSMUST00000208058 Scgb2a2J3KMP9 96 aa13.18□□□□□ -0.3
Pcf11-204ENSMUST00000208058 Fam168bQ80XQ8 194 aa13.18□□□□□ -0.3
Pcf11-204ENSMUST00000208058 Uqcr10Q8R1I1 64 aa13.17□□□□□ -0.3
Pcf11-204ENSMUST00000208058 OtorQ9JIE3 128 aa13.17□□□□□ -0.3
Pcf11-204ENSMUST00000208058 SnapinQ9Z266 136 aa13.17□□□□□ -0.3
Pcf11-204ENSMUST00000208058 A0A1Y7VMQ4 148 aa13.16□□□□□ -0.3
Pcf11-204ENSMUST00000208058 Fabp4P04117 132 aa13.16□□□□□ -0.3
Pcf11-204ENSMUST00000208058 Cks1bP61025 79 aa13.16□□□□□ -0.3
Pcf11-204ENSMUST00000208058 Bsph2Q0Q236 131 aa13.16□□□□□ -0.3
Pcf11-204ENSMUST00000208058 Ntn5Q3UQ22 452 aa13.16□□□□□ -0.3
Pcf11-204ENSMUST00000208058 CrxO54751 299 aa13.15□□□□□ -0.3
Pcf11-204ENSMUST00000208058 Defa3P28310 93 aa13.15□□□□□ -0.3
Pcf11-204ENSMUST00000208058 Ankrd39Q9D2X0 183 aa13.15□□□□□ -0.3
Pcf11-204ENSMUST00000208058 Ca1P13634 261 aa13.14□□□□□ -0.31
Pcf11-204ENSMUST00000208058 Fam19a5Q91WE9 132 aa13.14□□□□□ -0.31
Pcf11-204ENSMUST00000208058 Leprotl1Q9CQ74 131 aa13.14□□□□□ -0.31
Pcf11-204ENSMUST00000208058 SvbpQ99LQ4 66 aa13.13□□□□□ -0.31
Pcf11-204ENSMUST00000208058 Ufsp1Q9CZP0 217 aa13.13□□□□□ -0.31
Pcf11-204ENSMUST00000208058 Igkv2-137A0A0B4J1H6 120 aa13.12□□□□□ -0.31
Pcf11-204ENSMUST00000208058 Scgb1b29D2XZ31 93 aa13.12□□□□□ -0.31
Pcf11-204ENSMUST00000208058 Scgb1b20E9PWZ2 93 aa13.12□□□□□ -0.31
Pcf11-204ENSMUST00000208058 Rpl28P41105 137 aaKnown RBP13.12□□□□□ -0.31
Pcf11-204ENSMUST00000208058 Fam19a1Q7TPG8 133 aa13.12□□□□□ -0.31
Pcf11-204ENSMUST00000208058 BC106179Q8C9L1 186 aa13.12□□□□□ -0.31
Pcf11-204ENSMUST00000208058 Gm35549A0A0N4SUS7 141 aa13.11□□□□□ -0.31
Pcf11-204ENSMUST00000208058 Ino80eA0A0U1RP99 260 aa13.11□□□□□ -0.31
Pcf11-204ENSMUST00000208058 C530025M09RikF6RGA8 229 aa13.11□□□□□ -0.31
Pcf11-204ENSMUST00000208058 Wfdc6bF6ULY1 148 aa13.11□□□□□ -0.31
Pcf11-204ENSMUST00000208058 Ypel4Q65Z93 127 aa13.11□□□□□ -0.31
Pcf11-204ENSMUST00000208058 Gm1553Q66VB7 94 aa13.11□□□□□ -0.31
Pcf11-204ENSMUST00000208058 Fam19a2Q7TPG7 131 aa13.11□□□□□ -0.31
Pcf11-204ENSMUST00000208058 Slc25a2Q99ML6 265 aa13.11□□□□□ -0.31
Pcf11-204ENSMUST00000208058 2310009B15RikA0A0A6YWI4 143 aa13.1□□□□□ -0.31
Pcf11-204ENSMUST00000208058 Urm1Q9D2P4 101 aa13.1□□□□□ -0.31
Pcf11-204ENSMUST00000208058 Ighv1-62-1A0A075B5U3 116 aa13.09□□□□□ -0.31
Pcf11-204ENSMUST00000208058 6030445D17RikE9Q8F9 148 aa13.09□□□□□ -0.31
Pcf11-204ENSMUST00000208058 Q3UUX7 111 aa13.09□□□□□ -0.31
Pcf11-204ENSMUST00000208058 Gm10130F6ZHM5 101 aa13.08□□□□□ -0.32
Pcf11-204ENSMUST00000208058 Tmem170bP86050 132 aa13.08□□□□□ -0.32
Pcf11-204ENSMUST00000208058 Pglyrp4Q0VB07 374 aa13.08□□□□□ -0.32
Pcf11-204ENSMUST00000208058 4932415D10RikA0A1W2P6U8 4986 aa13.07□□□□□ -0.32
Pcf11-204ENSMUST00000208058 Gm1968Q3T9I3 115 aa13.07□□□□□ -0.32
Pcf11-204ENSMUST00000208058 Tspo2Q9CRZ8 162 aa13.07□□□□□ -0.32
Pcf11-204ENSMUST00000208058 Fndc10A2A9Q0 223 aa13.06□□□□□ -0.32
Pcf11-204ENSMUST00000208058 Klk12B2RVZ0 247 aa13.06□□□□□ -0.32
Pcf11-204ENSMUST00000208058 Hbb-b2P02089 147 aa13.06□□□□□ -0.32
Pcf11-204ENSMUST00000208058 Gng4P50153 75 aa13.05□□□□□ -0.32
Pcf11-204ENSMUST00000208058 D130052B06RikQ3UW13 202 aa13.05□□□□□ -0.32
Pcf11-204ENSMUST00000208058 Gm9789Q8BIG3 52 aa13.05□□□□□ -0.32
Pcf11-204ENSMUST00000208058 Gm9903Q8C9Y8 129 aa13.05□□□□□ -0.32
Pcf11-204ENSMUST00000208058 Trav8-1A0A075B641 109 aa13.04□□□□□ -0.32
Pcf11-204ENSMUST00000208058 Defa7P50705 93 aa13.04□□□□□ -0.32
Pcf11-204ENSMUST00000208058 Rab5bP61021 215 aa13.04□□□□□ -0.32
Pcf11-204ENSMUST00000208058 Obox2E9PXV9 151 aa13.03□□□□□ -0.32
Pcf11-204ENSMUST00000208058 RnasekQ8K3C0 98 aa13.03□□□□□ -0.32
Pcf11-204ENSMUST00000208058 Olfr983Q8VG90 315 aa13.03□□□□□ -0.32
Pcf11-204ENSMUST00000208058 Ube2bP63147 152 aa13.02□□□□□ -0.33
Pcf11-204ENSMUST00000208058 Defb50Q6TU36 73 aa13.02□□□□□ -0.33
Pcf11-204ENSMUST00000208058 Fam25cQ8CF02 89 aa13.02□□□□□ -0.33
Pcf11-204ENSMUST00000208058 Wfdc12Q9JHY3 85 aa13.02□□□□□ -0.33
Pcf11-204ENSMUST00000208058 Gm10570F6VB42 170 aa13.01□□□□□ -0.33
Pcf11-204ENSMUST00000208058 Bsph1Q3UW26 133 aa13.01□□□□□ -0.33
Pcf11-204ENSMUST00000208058 Mpv17l2Q8VIK2 200 aa13□□□□□ -0.33
Pcf11-204ENSMUST00000208058 Fgf23Q9EPC2 251 aa13□□□□□ -0.33
Pcf11-204ENSMUST00000208058 Gm9736A0A1W2P7N1 277 aa12.99□□□□□ -0.33
Pcf11-204ENSMUST00000208058 Prol1E9PYQ4 312 aa12.99□□□□□ -0.33
Pcf11-204ENSMUST00000208058 Gm10549Q3URY4 149 aa12.99□□□□□ -0.33
Pcf11-204ENSMUST00000208058 Igkv8-16A0A0G2JDG9 121 aa12.98□□□□□ -0.33
Pcf11-204ENSMUST00000208058 Gm867A0A1W2P7T4 151 aa12.97□□□□□ -0.33
Pcf11-204ENSMUST00000208058 A930033H14RikG5E8X6 103 aa12.97□□□□□ -0.33
Pcf11-204ENSMUST00000208058 P01755 137 aa12.97□□□□□ -0.33
Pcf11-204ENSMUST00000208058 Defa13P50711 93 aa12.97□□□□□ -0.33
Pcf11-204ENSMUST00000208058 Ly6hQ9WUC3 139 aa12.97□□□□□ -0.33
Pcf11-204ENSMUST00000208058 MifP34884 115 aaKnown RBP12.96□□□□□ -0.33
Pcf11-204ENSMUST00000208058 Fam19a3Q7TPG6 132 aa12.96□□□□□ -0.33
Pcf11-204ENSMUST00000208058 Ubr4A2AN08 5180 aa12.96□□□□□ -0.33
Pcf11-204ENSMUST00000208058 Gm4064A0A087WR82 380 aa12.94□□□□□ -0.34
Pcf11-204ENSMUST00000208058 Gm10352B2RWR6 380 aa12.94□□□□□ -0.34
Pcf11-204ENSMUST00000208058 SpxD3Z752 116 aa12.94□□□□□ -0.34
Pcf11-204ENSMUST00000208058 Rbmy1a1O35698 380 aa12.94□□□□□ -0.34
Pcf11-204ENSMUST00000208058 PlnP61014 52 aa12.94□□□□□ -0.34
Pcf11-204ENSMUST00000208058 Gm10642Q3TWM1 71 aa12.94□□□□□ -0.34
Pcf11-204ENSMUST00000208058 Rbmy1bQ60990 380 aa12.94□□□□□ -0.34
Pcf11-204ENSMUST00000208058 Hspb8Q9JK92 196 aa12.94□□□□□ -0.34
Pcf11-204ENSMUST00000208058 Trav9d-4A0A0G2JG37 103 aa12.93□□□□□ -0.34
Pcf11-204ENSMUST00000208058 Gm21834J3QN05 151 aa12.93□□□□□ -0.34
Pcf11-204ENSMUST00000208058 Hmcn2A2AJ76 5100 aa12.92□□□□□ -0.34
Pcf11-204ENSMUST00000208058 P01794 123 aa12.91□□□□□ -0.34
Pcf11-204ENSMUST00000208058 Rpl18aP62717 176 aaKnown RBP12.91□□□□□ -0.34
Pcf11-204ENSMUST00000208058 Cib3Q0P523 160 aa12.91□□□□□ -0.34
Retrieved 100 of 22,080 RNA–protein pairs in 43.1 ms