RNA–Protein interactions for RNA: ENSMUST00000173009.7

Lig3-209, Transcript of DNA ligase 3, mousemouse

TSL 1 (best) BASIC

Gene Lig3, Length 1,785 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3-209ENSMUST00000173009 Fam240aJ3QNP9 97 aa13.04□□□□□ -0.32
Lig3-209ENSMUST00000173009 Defa9P50707 93 aa13.04□□□□□ -0.32
Lig3-209ENSMUST00000173009 Ube2wQ8VDW4 151 aa13.04□□□□□ -0.32
Lig3-209ENSMUST00000173009 Bsph2Q0Q236 131 aa13.02□□□□□ -0.32
Lig3-209ENSMUST00000173009 Gm5148Q8BGG2 154 aa13.02□□□□□ -0.32
Lig3-209ENSMUST00000173009 Ryr2E9Q401 4966 aaKnown RBP13.02□□□□□ -0.33
Lig3-209ENSMUST00000173009 Dnah2P0C6F1 4456 aa13.02□□□□□ -0.33
Lig3-209ENSMUST00000173009 Ighv1-56A0A0A6YXG2 117 aa13.02□□□□□ -0.33
Lig3-209ENSMUST00000173009 CnbpP53996 178 aaKnown RBP13.02□□□□□ -0.33
Lig3-209ENSMUST00000173009 Igkv8-24A0A140T8P5 121 aa13.01□□□□□ -0.33
Lig3-209ENSMUST00000173009 Gm10837Q3UTT8 145 aa13.01□□□□□ -0.33
Lig3-209ENSMUST00000173009 Gatd1Q8BFQ8 220 aa13.01□□□□□ -0.33
Lig3-209ENSMUST00000173009 Ifi27l2bQ8VC49 283 aa13.01□□□□□ -0.33
Lig3-209ENSMUST00000173009 Gm20730A0A075B5J6 119 aa13□□□□□ -0.33
Lig3-209ENSMUST00000173009 Ca1P13634 261 aa13□□□□□ -0.33
Lig3-209ENSMUST00000173009 Gm2696A0A1W2P709 240 aa12.99□□□□□ -0.33
Lig3-209ENSMUST00000173009 P01837 106 aa12.99□□□□□ -0.33
Lig3-209ENSMUST00000173009 AponG3X9D6 251 aa12.99□□□□□ -0.33
Lig3-209ENSMUST00000173009 Cks1brtQ3UNC9 96 aa12.99□□□□□ -0.33
Lig3-209ENSMUST00000173009 Tmem86bQ497J1 226 aa12.99□□□□□ -0.33
Lig3-209ENSMUST00000173009 4930519P11RikQ9CUJ8 166 aa12.99□□□□□ -0.33
Lig3-209ENSMUST00000173009 Pkd1O08852 4293 aa12.98□□□□□ -0.33
Lig3-209ENSMUST00000173009 Cend1Q9JKC6 149 aa12.98□□□□□ -0.33
Lig3-209ENSMUST00000173009 Defa10P50708 93 aa12.97□□□□□ -0.33
Lig3-209ENSMUST00000173009 Cks1bP61025 79 aa12.97□□□□□ -0.33
Lig3-209ENSMUST00000173009 Pam16Q9CQV1 125 aa12.97□□□□□ -0.33
Lig3-209ENSMUST00000173009 Cox7b2Q9D2H1 82 aa12.97□□□□□ -0.33
Lig3-209ENSMUST00000173009 Gm42674D3YUT9 64 aa12.95□□□□□ -0.34
Lig3-209ENSMUST00000173009 Hrct1Q9D6B9 109 aa12.95□□□□□ -0.34
Lig3-209ENSMUST00000173009 A730009L09RikA0A1B0GS82 72 aa12.94□□□□□ -0.34
Lig3-209ENSMUST00000173009 1500009C09RikD3YYW9 81 aa12.94□□□□□ -0.34
Lig3-209ENSMUST00000173009 Pmp2P24526 132 aa12.94□□□□□ -0.34
Lig3-209ENSMUST00000173009 Defb50Q6TU36 73 aa12.94□□□□□ -0.34
Lig3-209ENSMUST00000173009 Tspo2Q9CRZ8 162 aa12.94□□□□□ -0.34
Lig3-209ENSMUST00000173009 Gm10604Q3V0X7 143 aa12.94□□□□□ -0.34
Lig3-209ENSMUST00000173009 Sprr4Q8CGN8 76 aa12.94□□□□□ -0.34
Lig3-209ENSMUST00000173009 Hsbp1l1B2RXB2 72 aa12.93□□□□□ -0.34
Lig3-209ENSMUST00000173009 P01755 137 aa12.93□□□□□ -0.34
Lig3-209ENSMUST00000173009 Gm9242J3QNY1 357 aa12.92□□□□□ -0.34
Lig3-209ENSMUST00000173009 Gm10735Q3US96 136 aa12.92□□□□□ -0.34
Lig3-209ENSMUST00000173009 Hnrnpa3Q8BG05 379 aaKnown RBP12.92□□□□□ -0.34
Lig3-209ENSMUST00000173009 Prelid3aQ8VE85 172 aa12.92□□□□□ -0.34
Lig3-209ENSMUST00000173009 Cox8cA6H666 72 aa12.92□□□□□ -0.34
Lig3-209ENSMUST00000173009 Trappc1Q5NCF2 145 aa12.92□□□□□ -0.34
Lig3-209ENSMUST00000173009 Ndufc2Q9CQ54 120 aa12.92□□□□□ -0.34
Lig3-209ENSMUST00000173009 PpdpfQ9CR37 115 aa12.91□□□□□ -0.34
Lig3-209ENSMUST00000173009 B230359F08RikA0A0B4J1K3 109 aa12.89□□□□□ -0.35
Lig3-209ENSMUST00000173009 Isg15Q64339 161 aaKnown RBP12.89□□□□□ -0.35
Lig3-209ENSMUST00000173009 Igkv3-2A0A075B5P0 119 aa12.89□□□□□ -0.35
Lig3-209ENSMUST00000173009 C530025M09RikF6RGA8 229 aa12.89□□□□□ -0.35
Lig3-209ENSMUST00000173009 Rmi2Q3UPE3 149 aa12.89□□□□□ -0.35
Lig3-209ENSMUST00000173009 Camk2n2Q78WH7 79 aa12.89□□□□□ -0.35
Lig3-209ENSMUST00000173009 1700012A03RikQ9DAF1 130 aa12.89□□□□□ -0.35
Lig3-209ENSMUST00000173009 SrarpQ3ULG3 163 aa12.88□□□□□ -0.35
Lig3-209ENSMUST00000173009 Sprr1aQ62266 144 aa12.88□□□□□ -0.35
Lig3-209ENSMUST00000173009 BB014433Q8C5R5 389 aa12.88□□□□□ -0.35
Lig3-209ENSMUST00000173009 Plac1Q9JI83 173 aa12.87□□□□□ -0.35
Lig3-209ENSMUST00000173009 Iglc1A0A0G2JE99 106 aa12.86□□□□□ -0.35
Lig3-209ENSMUST00000173009 Gm6812B1AXU1 112 aa12.86□□□□□ -0.35
Lig3-209ENSMUST00000173009 4930432M17RikQ3V0W9 174 aa12.86□□□□□ -0.35
Lig3-209ENSMUST00000173009 Scgb1b10A0A087WPW0 93 aa12.86□□□□□ -0.35
Lig3-209ENSMUST00000173009 Gm35549A0A0N4SUS7 141 aa12.86□□□□□ -0.35
Lig3-209ENSMUST00000173009 A0A286YCN5 57 aa12.86□□□□□ -0.35
Lig3-209ENSMUST00000173009 4930544G11RikQ9CR99 193 aa12.86□□□□□ -0.35
Lig3-209ENSMUST00000173009 Dppa2Q9CWH0 301 aa12.86□□□□□ -0.35
Lig3-209ENSMUST00000173009 9430015G10RikA2ASP7 199 aa12.85□□□□□ -0.35
Lig3-209ENSMUST00000173009 P0C913 63 aa12.84□□□□□ -0.35
Lig3-209ENSMUST00000173009 Gm5868Q8BJG1 145 aa12.84□□□□□ -0.35
Lig3-209ENSMUST00000173009 Trav9d-4A0A0G2JG37 103 aa12.84□□□□□ -0.35
Lig3-209ENSMUST00000173009 Gnb1lQ9EQ15 326 aa12.84□□□□□ -0.35
Lig3-209ENSMUST00000173009 Pgpep1Q9ESW8 209 aa12.84□□□□□ -0.35
Lig3-209ENSMUST00000173009 Gm44965A0A0N4SVR3 59 aa12.83□□□□□ -0.36
Lig3-209ENSMUST00000173009 Lect2O88803 151 aa12.83□□□□□ -0.36
Lig3-209ENSMUST00000173009 Rpl13aP19253 203 aaKnown RBP12.83□□□□□ -0.36
Lig3-209ENSMUST00000173009 Mc5rP41149 325 aa12.83□□□□□ -0.36
Lig3-209ENSMUST00000173009 Morn5Q9DAI9 170 aa12.83□□□□□ -0.36
Lig3-209ENSMUST00000173009 Erg28Q9ERY9 140 aa12.82□□□□□ -0.36
Lig3-209ENSMUST00000173009 CrxO54751 299 aa12.81□□□□□ -0.36
Lig3-209ENSMUST00000173009 Mzt1Q8BUR9 78 aa12.81□□□□□ -0.36
Lig3-209ENSMUST00000173009 2310009B15RikA0A0A6YWI4 143 aa12.81□□□□□ -0.36
Lig3-209ENSMUST00000173009 Gm45753A0A1C7CYU8 86 aa12.81□□□□□ -0.36
Lig3-209ENSMUST00000173009 Gm26727M0QWT1 121 aa12.81□□□□□ -0.36
Lig3-209ENSMUST00000173009 Dync1h1Q9JHU4 4644 aaKnown RBP12.8□□□□□ -0.36
Lig3-209ENSMUST00000173009 Hbb-bsA8DUK4 147 aa12.8□□□□□ -0.36
Lig3-209ENSMUST00000173009 Krtap13O88375 197 aa12.8□□□□□ -0.36
Lig3-209ENSMUST00000173009 Hbb-b1P02088 147 aa12.8□□□□□ -0.36
Lig3-209ENSMUST00000173009 SycnQ8VCK7 134 aa12.8□□□□□ -0.36
Lig3-209ENSMUST00000173009 Gm867A0A1W2P7T4 151 aa12.79□□□□□ -0.36
Lig3-209ENSMUST00000173009 Ufsp1Q9CZP0 217 aa12.79□□□□□ -0.36
Lig3-209ENSMUST00000173009 Dnah5Q8VHE6 4621 aa12.79□□□□□ -0.36
Lig3-209ENSMUST00000173009 Igkv8-16A0A0G2JDG9 121 aa12.79□□□□□ -0.36
Lig3-209ENSMUST00000173009 Trav14-1A0A0G2JF94 121 aa12.79□□□□□ -0.36
Lig3-209ENSMUST00000173009 Gm17577J3QNF7 156 aa12.79□□□□□ -0.36
Lig3-209ENSMUST00000173009 4930442H23RikQ9D5G7 103 aa12.79□□□□□ -0.36
Lig3-209ENSMUST00000173009 Wfdc12Q9JHY3 85 aa12.79□□□□□ -0.36
Lig3-209ENSMUST00000173009 Stard9Q80TF6 4561 aa12.79□□□□□ -0.36
Lig3-209ENSMUST00000173009 Hist2h2beQ64524 126 aa12.78□□□□□ -0.36
Lig3-209ENSMUST00000173009 Ssbp1Q9CYR0 152 aaKnown RBP12.78□□□□□ -0.36
Lig3-209ENSMUST00000173009 Trav13-2A0A075B649 110 aa12.76□□□□□ -0.37
Lig3-209ENSMUST00000173009 Defa23Q5G866 93 aa12.76□□□□□ -0.37
Retrieved 100 of 22,080 RNA–protein pairs in 56.3 ms