RNA–Protein interactions for RNA: ENSMUST00000106961.1

Cdc27-202, Transcript of Cell division cycle protein 27 homolog, mousemouse

TSL 1 (best) BASIC

Gene Cdc27, Length 1,863 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc27-202ENSMUST00000106961 Gm26727M0QWT1 121 aa11.37□□□□□ -0.59
Cdc27-202ENSMUST00000106961 Rbx1P62878 108 aa11.37□□□□□ -0.59
Cdc27-202ENSMUST00000106961 4930432M17RikQ3V0W9 174 aa11.37□□□□□ -0.59
Cdc27-202ENSMUST00000106961 Ss18l2Q9D174 77 aa11.36□□□□□ -0.59
Cdc27-202ENSMUST00000106961 Tspan13Q9D8C2 204 aa11.36□□□□□ -0.59
Cdc27-202ENSMUST00000106961 6430550D23RikE9Q1X6 194 aa11.36□□□□□ -0.59
Cdc27-202ENSMUST00000106961 Tmem223Q9CQE2 199 aaKnown RBP11.36□□□□□ -0.59
Cdc27-202ENSMUST00000106961 OxtP35454 125 aa11.35□□□□□ -0.59
Cdc27-202ENSMUST00000106961 Cd33Q63994 403 aa11.35□□□□□ -0.59
Cdc27-202ENSMUST00000106961 Morn5Q9DAI9 170 aa11.35□□□□□ -0.59
Cdc27-202ENSMUST00000106961 HilpdaQ9JLS0 64 aa11.35□□□□□ -0.59
Cdc27-202ENSMUST00000106961 RetnQ99P87 114 aa11.34□□□□□ -0.59
Cdc27-202ENSMUST00000106961 1700010B08RikQ9DAI7 102 aa11.34□□□□□ -0.59
Cdc27-202ENSMUST00000106961 Ryr1E9PZQ0 5035 aa11.34□□□□□ -0.59
Cdc27-202ENSMUST00000106961 CirbpP60824 172 aaKnown RBP11.34□□□□□ -0.59
Cdc27-202ENSMUST00000106961 Gm9936Q8C864 160 aa11.34□□□□□ -0.59
Cdc27-202ENSMUST00000106961 Dnah3Q8BW94 4083 aa11.33□□□□□ -0.6
Cdc27-202ENSMUST00000106961 Sprr1bQ62267 153 aa11.33□□□□□ -0.6
Cdc27-202ENSMUST00000106961 Zfand2aQ9JII7 171 aa11.33□□□□□ -0.6
Cdc27-202ENSMUST00000106961 Ighv8-13A0A075B5Y0 101 aa11.32□□□□□ -0.6
Cdc27-202ENSMUST00000106961 CckP09240 115 aa11.32□□□□□ -0.6
Cdc27-202ENSMUST00000106961 Trav13-4-dv7A0A075B6C2 110 aa11.31□□□□□ -0.6
Cdc27-202ENSMUST00000106961 Igkv1-99F6XWB2 120 aa11.31□□□□□ -0.6
Cdc27-202ENSMUST00000106961 Spink13Q3UTS8 97 aa11.31□□□□□ -0.6
Cdc27-202ENSMUST00000106961 Trav11A0A0B4J1J9 114 aa11.3□□□□□ -0.6
Cdc27-202ENSMUST00000106961 Prp2P05143 317 aa11.29□□□□□ -0.6
Cdc27-202ENSMUST00000106961 Trav13n-1A0A0G2JEU8 110 aa11.29□□□□□ -0.6
Cdc27-202ENSMUST00000106961 Glrp1E9Q9S8 174 aa11.29□□□□□ -0.6
Cdc27-202ENSMUST00000106961 Ighv8-11A0A075B5X4 119 aa11.28□□□□□ -0.6
Cdc27-202ENSMUST00000106961 Trav7-6A0A075B640 112 aa11.28□□□□□ -0.6
Cdc27-202ENSMUST00000106961 Igkv3-9A0A140T8P4 119 aa11.28□□□□□ -0.6
Cdc27-202ENSMUST00000106961 Cops9Q3U898 57 aa11.28□□□□□ -0.6
Cdc27-202ENSMUST00000106961 PlecQ9QXS1 4691 aaKnown RBP11.28□□□□□ -0.6
Cdc27-202ENSMUST00000106961 Trav13d-4A0A0G2JFX3 110 aa11.27□□□□□ -0.61
Cdc27-202ENSMUST00000106961 Defb50Q6TU36 73 aa11.27□□□□□ -0.61
Cdc27-202ENSMUST00000106961 Vps25Q9CQ80 176 aa11.27□□□□□ -0.61
Cdc27-202ENSMUST00000106961 Rab37Q9JKM7 223 aa11.27□□□□□ -0.61
Cdc27-202ENSMUST00000106961 Rpl32-psP17932 135 aa11.26□□□□□ -0.61
Cdc27-202ENSMUST00000106961 Cited1P97769 203 aa11.26□□□□□ -0.61
Cdc27-202ENSMUST00000106961 Slamf6Q9ET39 351 aa11.26□□□□□ -0.61
Cdc27-202ENSMUST00000106961 Defa3P28310 93 aa11.25□□□□□ -0.61
Cdc27-202ENSMUST00000106961 Defa10P50708 93 aa11.25□□□□□ -0.61
Cdc27-202ENSMUST00000106961 Defa15P50713 93 aa11.25□□□□□ -0.61
Cdc27-202ENSMUST00000106961 Gm10577Q3UDV9 132 aa11.25□□□□□ -0.61
Cdc27-202ENSMUST00000106961 Igkv6-13A0A0G2JGY3 119 aa11.25□□□□□ -0.61
Cdc27-202ENSMUST00000106961 Ighv2-9-1A0A075B697 116 aa11.24□□□□□ -0.61
Cdc27-202ENSMUST00000106961 4930415O20RikQ8CDT5 131 aa11.24□□□□□ -0.61
Cdc27-202ENSMUST00000106961 Pxt1Q8K459 51 aa11.24□□□□□ -0.61
Cdc27-202ENSMUST00000106961 Rpl13aP19253 203 aaKnown RBP11.23□□□□□ -0.61
Cdc27-202ENSMUST00000106961 Dync2h1Q45VK7 4306 aa11.23□□□□□ -0.61
Cdc27-202ENSMUST00000106961 Gm9508A0A1W2P7W0 230 aa11.23□□□□□ -0.61
Cdc27-202ENSMUST00000106961 Cryba4Q9JJV0 196 aa11.23□□□□□ -0.61
Cdc27-202ENSMUST00000106961 1700011M02RikB1AX35 88 aa11.22□□□□□ -0.61
Cdc27-202ENSMUST00000106961 NrepQ07475 68 aa11.22□□□□□ -0.61
Cdc27-202ENSMUST00000106961 Sostdc1Q9CQN4 206 aa11.22□□□□□ -0.61
Cdc27-202ENSMUST00000106961 Gm26920S4R2A5 56 aa11.22□□□□□ -0.61
Cdc27-202ENSMUST00000106961 Hint1P70349 126 aaKnown RBP11.21□□□□□ -0.61
Cdc27-202ENSMUST00000106961 Ryr3A2AGL3 4863 aa11.21□□□□□ -0.61
Cdc27-202ENSMUST00000106961 Trav9d-4A0A0G2JG37 103 aa11.19□□□□□ -0.62
Cdc27-202ENSMUST00000106961 Igkv8-34A0A0G2JDU0 121 aa11.19□□□□□ -0.62
Cdc27-202ENSMUST00000106961 Gm45213A0A0U1RNZ6 101 aa11.19□□□□□ -0.62
Cdc27-202ENSMUST00000106961 Gm16181B0V2H2 73 aa11.19□□□□□ -0.62
Cdc27-202ENSMUST00000106961 Dnah7aE9Q0T8 4024 aa11.18□□□□□ -0.62
Cdc27-202ENSMUST00000106961 Ryr2E9Q401 4966 aaKnown RBP11.18□□□□□ -0.62
Cdc27-202ENSMUST00000106961 Trav9n-4A0A075B631 113 aa11.18□□□□□ -0.62
Cdc27-202ENSMUST00000106961 Gm11020F6ZGD5 61 aa11.18□□□□□ -0.62
Cdc27-202ENSMUST00000106961 P01755 137 aa11.17□□□□□ -0.62
Cdc27-202ENSMUST00000106961 Mzt1Q8BUR9 78 aa11.17□□□□□ -0.62
Cdc27-202ENSMUST00000106961 Gm10251J3QPM5 127 aa11.17□□□□□ -0.62
Cdc27-202ENSMUST00000106961 Cox11Q6P8I6 275 aa11.17□□□□□ -0.62
Cdc27-202ENSMUST00000106961 Lage3Q9CR70 148 aa11.17□□□□□ -0.62
Cdc27-202ENSMUST00000106961 Zc2hc1bQ9D534 172 aa11.17□□□□□ -0.62
Cdc27-202ENSMUST00000106961 Snhg11Q4G0K9 87 aa11.16□□□□□ -0.62
Cdc27-202ENSMUST00000106961 PemtQ61907 199 aa11.16□□□□□ -0.62
Cdc27-202ENSMUST00000106961 Gm4861Q8C5A4 106 aa11.16□□□□□ -0.62
Cdc27-202ENSMUST00000106961 Gm9507D3Z5T3 223 aa11.15□□□□□ -0.62
Cdc27-202ENSMUST00000106961 Try10Q792Z1 246 aaKnown RBP11.15□□□□□ -0.62
Cdc27-202ENSMUST00000106961 4930544G11RikQ9CR99 193 aa11.15□□□□□ -0.62
Cdc27-202ENSMUST00000106961 Lst1O08843 95 aa11.15□□□□□ -0.63
Cdc27-202ENSMUST00000106961 Defb47Q30KN1 79 aa11.14□□□□□ -0.63
Cdc27-202ENSMUST00000106961 SpinklQ8CEK3 90 aa11.14□□□□□ -0.63
Cdc27-202ENSMUST00000106961 Igkv3-1A0A075B5P1 119 aa11.13□□□□□ -0.63
Cdc27-202ENSMUST00000106961 E130208F15RikQ3UPV3 143 aa11.13□□□□□ -0.63
Cdc27-202ENSMUST00000106961 Gm10549Q3URY4 149 aa11.13□□□□□ -0.63
Cdc27-202ENSMUST00000106961 2010109I03RikQ9CQ11 111 aa11.13□□□□□ -0.63
Cdc27-202ENSMUST00000106961 Gm17509Q9CZ61 145 aa11.13□□□□□ -0.63
Cdc27-202ENSMUST00000106961 Dnah17Q69Z23 4481 aa11.13□□□□□ -0.63
Cdc27-202ENSMUST00000106961 Krtap11-1E9Q2E9 183 aa11.12□□□□□ -0.63
Cdc27-202ENSMUST00000106961 MalO09198 153 aa11.12□□□□□ -0.63
Cdc27-202ENSMUST00000106961 Tmem86bQ497J1 226 aa11.12□□□□□ -0.63
Cdc27-202ENSMUST00000106961 Prss58Q8BW11 241 aa11.12□□□□□ -0.63
Cdc27-202ENSMUST00000106961 EnhoQ8K1D8 76 aa11.12□□□□□ -0.63
Cdc27-202ENSMUST00000106961 Wdr38Q9D994 303 aa11.12□□□□□ -0.63
Cdc27-202ENSMUST00000106961 Stab2Q8R4U0 2559 aa11.12□□□□□ -0.63
Cdc27-202ENSMUST00000106961 Prh1P05142 261 aa11.12□□□□□ -0.63
Cdc27-202ENSMUST00000106961 Eif4ebp3Q80VV3 101 aa11.12□□□□□ -0.63
Cdc27-202ENSMUST00000106961 Gtf2h5Q8K2X8 71 aa11.12□□□□□ -0.63
Cdc27-202ENSMUST00000106961 AplnQ9R0R4 77 aa11.12□□□□□ -0.63
Cdc27-202ENSMUST00000106961 Ly6hQ9WUC3 139 aa11.12□□□□□ -0.63
Cdc27-202ENSMUST00000106961 Cks1bP61025 79 aa11.11□□□□□ -0.63
Retrieved 100 of 22,080 RNA–protein pairs in 40.2 ms