RNA–Protein interactions for RNA: ENSMUST00000094818.3

Chpf-202, Transcript of Chondroitin sulfate synthase 2, mousemouse

TSL 1 (best) BASIC

Gene Chpf, Length 3,065 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Chpf-202ENSMUST00000094818 Ighv1-11A0A0A6YWI9 117 aa11.12□□□□□ -0.63
Chpf-202ENSMUST00000094818 Nbeal2Q6ZQA0 2742 aa11.12□□□□□ -0.63
Chpf-202ENSMUST00000094818 MalO09198 153 aa11.12□□□□□ -0.63
Chpf-202ENSMUST00000094818 Smim26Q3V460 107 aa11.12□□□□□ -0.63
Chpf-202ENSMUST00000094818 Defa23Q5G866 93 aa11.12□□□□□ -0.63
Chpf-202ENSMUST00000094818 Notch1Q01705 2531 aa11.11□□□□□ -0.63
Chpf-202ENSMUST00000094818 Gm10226O88253 85 aa11.11□□□□□ -0.63
Chpf-202ENSMUST00000094818 Trav9d-3A0A075B695 113 aa11.1□□□□□ -0.63
Chpf-202ENSMUST00000094818 Tenm4Q3UHK6 2771 aa11.1□□□□□ -0.63
Chpf-202ENSMUST00000094818 7530416G11RikJ3QJX6 159 aa11.1□□□□□ -0.63
Chpf-202ENSMUST00000094818 Cystm1Q8K353 104 aa11.1□□□□□ -0.63
Chpf-202ENSMUST00000094818 Ighv1-62-1A0A075B5U3 116 aa11.1□□□□□ -0.63
Chpf-202ENSMUST00000094818 P01738 130 aa11.1□□□□□ -0.63
Chpf-202ENSMUST00000094818 P01745 121 aa11.09□□□□□ -0.63
Chpf-202ENSMUST00000094818 Crlf1Q9JM58 425 aa11.09□□□□□ -0.63
Chpf-202ENSMUST00000094818 Fbn1Q61554 2873 aaKnown RBP11.09□□□□□ -0.63
Chpf-202ENSMUST00000094818 P06329 120 aa11.08□□□□□ -0.64
Chpf-202ENSMUST00000094818 Defa20Q45VN2 95 aa11.08□□□□□ -0.64
Chpf-202ENSMUST00000094818 1700010B08RikQ9DAI7 102 aa11.08□□□□□ -0.64
Chpf-202ENSMUST00000094818 Nsd1O88491 2588 aaKnown RBP11.08□□□□□ -0.64
Chpf-202ENSMUST00000094818 Tmem243B2RVB9 118 aa11.08□□□□□ -0.64
Chpf-202ENSMUST00000094818 Igkv1-117A0A140T8M0 119 aa11.07□□□□□ -0.64
Chpf-202ENSMUST00000094818 MplkipQ9D011 178 aa11.07□□□□□ -0.64
Chpf-202ENSMUST00000094818 Gm10509O88255 85 aa11.07□□□□□ -0.64
Chpf-202ENSMUST00000094818 P01755 137 aa11.07□□□□□ -0.64
Chpf-202ENSMUST00000094818 Timm17bQ9Z0V7 172 aa11.07□□□□□ -0.64
Chpf-202ENSMUST00000094818 Trav13d-4A0A0G2JFX3 110 aa11.06□□□□□ -0.64
Chpf-202ENSMUST00000094818 Cox6b1P56391 86 aaKnown RBP11.06□□□□□ -0.64
Chpf-202ENSMUST00000094818 4930524J08RikQ9CUJ5 163 aa11.06□□□□□ -0.64
Chpf-202ENSMUST00000094818 4930442H23RikQ9D5G7 103 aa11.06□□□□□ -0.64
Chpf-202ENSMUST00000094818 Ighv1-63A0A075B5X2 117 aa11.05□□□□□ -0.64
Chpf-202ENSMUST00000094818 Rpl36aP83882 106 aaKnown RBP11.05□□□□□ -0.64
Chpf-202ENSMUST00000094818 Tomm7Q9D173 55 aa11.03□□□□□ -0.64
Chpf-202ENSMUST00000094818 Igkv2-109A0A075B5K6 120 aa11.03□□□□□ -0.64
Chpf-202ENSMUST00000094818 Krtap27-1E9PX37 202 aa11.02□□□□□ -0.65
Chpf-202ENSMUST00000094818 Fhl2O70433 279 aa11.02□□□□□ -0.65
Chpf-202ENSMUST00000094818 P01786 117 aa11.02□□□□□ -0.65
Chpf-202ENSMUST00000094818 Vmo1Q5SXG7 201 aa11.02□□□□□ -0.65
Chpf-202ENSMUST00000094818 Ighv1-49A0A0A6YWX2 117 aa11.02□□□□□ -0.65
Chpf-202ENSMUST00000094818 A930009A15RikG3UYI6 118 aa11.02□□□□□ -0.65
Chpf-202ENSMUST00000094818 CrygdP04342 174 aa11.01□□□□□ -0.65
Chpf-202ENSMUST00000094818 Tmem86bQ497J1 226 aa11.01□□□□□ -0.65
Chpf-202ENSMUST00000094818 4930564D02RikQ9D4S4 103 aa11.01□□□□□ -0.65
Chpf-202ENSMUST00000094818 Tenm1Q9WTS4 2731 aa11.01□□□□□ -0.65
Chpf-202ENSMUST00000094818 Col6a5A6H584 2640 aa11.01□□□□□ -0.65
Chpf-202ENSMUST00000094818 Trav4-3A0A0B4J1K1 110 aa11□□□□□ -0.65
Chpf-202ENSMUST00000094818 Cox7a1P56392 80 aa11□□□□□ -0.65
Chpf-202ENSMUST00000094818 PolqQ8CGS6 2544 aa11□□□□□ -0.65
Chpf-202ENSMUST00000094818 Brk1Q91VR8 75 aa11□□□□□ -0.65
Chpf-202ENSMUST00000094818 Igkv4-68A0A0B4J1I7 117 aa11□□□□□ -0.65
Chpf-202ENSMUST00000094818 Nop10Q9CQS2 64 aa11□□□□□ -0.65
Chpf-202ENSMUST00000094818 PrlhG3UWC3 86 aa10.99□□□□□ -0.65
Chpf-202ENSMUST00000094818 B230307C23RikQ8BLB2 64 aa10.99□□□□□ -0.65
Chpf-202ENSMUST00000094818 Spata25Q9DA57 226 aa10.99□□□□□ -0.65
Chpf-202ENSMUST00000094818 Rpl35aO55142 110 aa10.98□□□□□ -0.65
Chpf-202ENSMUST00000094818 Ucn2Q99ML8 113 aa10.98□□□□□ -0.65
Chpf-202ENSMUST00000094818 Klk11Q9QYN3 276 aa10.98□□□□□ -0.65
Chpf-202ENSMUST00000094818 Trav13-2A0A075B649 110 aa10.98□□□□□ -0.65
Chpf-202ENSMUST00000094818 Ighv5-9-1A0A0A6YVS4 126 aa10.97□□□□□ -0.65
Chpf-202ENSMUST00000094818 Klk12B2RVZ0 247 aa10.97□□□□□ -0.65
Chpf-202ENSMUST00000094818 Fam19a1Q7TPG8 133 aa10.97□□□□□ -0.65
Chpf-202ENSMUST00000094818 MifP34884 115 aaKnown RBP10.96□□□□□ -0.65
Chpf-202ENSMUST00000094818 Fam110dQ80X91 271 aa10.96□□□□□ -0.66
Chpf-202ENSMUST00000094818 2010109I03RikQ9CQ11 111 aa10.96□□□□□ -0.66
Chpf-202ENSMUST00000094818 Gm16381A0A1Y7VKT9 73 aa10.95□□□□□ -0.66
Chpf-202ENSMUST00000094818 Rpl18aP62717 176 aaKnown RBP10.95□□□□□ -0.66
Chpf-202ENSMUST00000094818 Plac8l1Q08EJ0 177 aa10.95□□□□□ -0.66
Chpf-202ENSMUST00000094818 Igkv1-99F6XWB2 120 aa10.95□□□□□ -0.66
Chpf-202ENSMUST00000094818 Fxyd5P97808 178 aa10.95□□□□□ -0.66
Chpf-202ENSMUST00000094818 4930519P11RikQ9CUJ8 166 aa10.95□□□□□ -0.66
Chpf-202ENSMUST00000094818 Trbv30A0A0B4J1P1 111 aa10.95□□□□□ -0.66
Chpf-202ENSMUST00000094818 Cdc42se2Q8BGH7 84 aa10.94□□□□□ -0.66
Chpf-202ENSMUST00000094818 Tfpi2O35536 230 aa10.93□□□□□ -0.66
Chpf-202ENSMUST00000094818 Rpl28P41105 137 aaKnown RBP10.93□□□□□ -0.66
Chpf-202ENSMUST00000094818 Fam229bQ8CF36 80 aa10.93□□□□□ -0.66
Chpf-202ENSMUST00000094818 EnhoQ8K1D8 76 aa10.93□□□□□ -0.66
Chpf-202ENSMUST00000094818 PtprqP0C5E4 2300 aa10.93□□□□□ -0.66
Chpf-202ENSMUST00000094818 Cox17P56394 63 aa10.93□□□□□ -0.66
Chpf-202ENSMUST00000094818 Lage3Q9CR70 148 aa10.93□□□□□ -0.66
Chpf-202ENSMUST00000094818 Ighv1-61P01749 117 aa10.93□□□□□ -0.66
Chpf-202ENSMUST00000094818 Fgfbp3Q1HCM0 245 aa10.93□□□□□ -0.66
Chpf-202ENSMUST00000094818 Itpr2Q9Z329 2701 aa10.92□□□□□ -0.66
Chpf-202ENSMUST00000094818 Rpl39lQ9CQD0 51 aa10.92□□□□□ -0.66
Chpf-202ENSMUST00000094818 Krtap26-1Q9D7N2 215 aa10.92□□□□□ -0.66
Chpf-202ENSMUST00000094818 GfyJ3KML8 504 aa10.91□□□□□ -0.66
Chpf-202ENSMUST00000094818 Rnase1P00683 149 aa10.91□□□□□ -0.66
Chpf-202ENSMUST00000094818 Samd13D3YUG0 102 aa10.9□□□□□ -0.66
Chpf-202ENSMUST00000094818 SnurfQ9WU12 71 aa10.9□□□□□ -0.67
Chpf-202ENSMUST00000094818 Gm10577Q3UDV9 132 aa10.89□□□□□ -0.67
Chpf-202ENSMUST00000094818 Cops9Q3U898 57 aa10.89□□□□□ -0.67
Chpf-202ENSMUST00000094818 Serp2Q6TAW2 65 aa10.89□□□□□ -0.67
Chpf-202ENSMUST00000094818 Igkv4-53A0A0G2JFC6 119 aa10.88□□□□□ -0.67
Chpf-202ENSMUST00000094818 BikO70337 150 aa10.88□□□□□ -0.67
Chpf-202ENSMUST00000094818 Ppp1r32Q148A4 427 aa10.88□□□□□ -0.67
Chpf-202ENSMUST00000094818 Gm7075D3Z497 112 aa10.87□□□□□ -0.67
Chpf-202ENSMUST00000094818 Trbv13-2A0A140T8N6 113 aa10.87□□□□□ -0.67
Chpf-202ENSMUST00000094818 Defa27F2Z403 93 aa10.87□□□□□ -0.67
Chpf-202ENSMUST00000094818 Gm3443F7CCV5 94 aa10.86□□□□□ -0.67
Chpf-202ENSMUST00000094818 Wfdc12Q9JHY3 85 aa10.86□□□□□ -0.67
Chpf-202ENSMUST00000094818 1810062G17RikG3X8Y2 129 aa10.86□□□□□ -0.67
Retrieved 100 of 22,080 RNA–protein pairs in 54.8 ms