RNA–Protein interactions for RNA: ENSMUST00000094818.3

Chpf-202, Transcript of Chondroitin sulfate synthase 2, mousemouse

TSL 1 (best) BASIC

Gene Chpf, Length 3,065 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Chpf-202ENSMUST00000094818 NischQ80TM9 1593 aa28.25■■■□□ 2.11
Chpf-202ENSMUST00000094818 Rhox8Q6VSS7 320 aa27.54■■■□□ 2
Chpf-202ENSMUST00000094818 Abcc9P70170 1546 aa27.09■■□□□ 1.93
Chpf-202ENSMUST00000094818 Gm35339A0A140LHH9 1649 aa26.83■■□□□ 1.89
Chpf-202ENSMUST00000094818 Abcc8B2RUS7 1588 aa26.67■■□□□ 1.86
Chpf-202ENSMUST00000094818 Ehmt2Q9Z148 1263 aaKnown RBP26.24■■□□□ 1.79
Chpf-202ENSMUST00000094818 Rpgrip1Q9EPQ2 1331 aa25.96■■□□□ 1.75
Chpf-202ENSMUST00000094818 Ccdc136Q3TVA9 1136 aa25.67■■□□□ 1.7
Chpf-202ENSMUST00000094818 Acin1Q9JIX8 1338 aaKnown RBP25.58■■□□□ 1.68
Chpf-202ENSMUST00000094818 Ccdc180J3QNE4 1664 aa25.38■■□□□ 1.65
Chpf-202ENSMUST00000094818 Pcgf6Q99NA9 353 aa25.38■■□□□ 1.65
Chpf-202ENSMUST00000094818 Rtl1Q7M732 1744 aa25.29■■□□□ 1.64
Chpf-202ENSMUST00000094818 ScribQ80U72 1612 aa24.95■■□□□ 1.58
Chpf-202ENSMUST00000094818 Supt5hO55201 1082 aaKnown RBP24.87■■□□□ 1.57
Chpf-202ENSMUST00000094818 Rb1cc1Q9ESK9 1588 aa24.74■■□□□ 1.55
Chpf-202ENSMUST00000094818 Zcchc6Q5BLK4 1491 aaKnown RBP24.64■■□□□ 1.53
Chpf-202ENSMUST00000094818 Kdm5dQ62240 1548 aa24.61■■□□□ 1.53
Chpf-202ENSMUST00000094818 Neurod1Q60867 357 aa24.55■■□□□ 1.52
Chpf-202ENSMUST00000094818 Trim41Q5NCC3 630 aa24.53■■□□□ 1.52
Chpf-202ENSMUST00000094818 Zeb1Q64318 1117 aa24.52■■□□□ 1.52
Chpf-202ENSMUST00000094818 Cngb1E1AZ71 1325 aa24.42■■□□□ 1.5
Chpf-202ENSMUST00000094818 HrcG5E8J6 738 aa24.41■■□□□ 1.5
Chpf-202ENSMUST00000094818 Gab3Q8BSM5 595 aa24.37■■□□□ 1.49
Chpf-202ENSMUST00000094818 Dcaf1Q80TR8 1506 aa24.36■■□□□ 1.49
Chpf-202ENSMUST00000094818 Baz1aO88379 1555 aa24.23■■□□□ 1.47
Chpf-202ENSMUST00000094818 NacadQ5SWP3 1504 aa24.22■■□□□ 1.47
Chpf-202ENSMUST00000094818 Esf1Q3V1V3 845 aaKnown RBP24.05■■□□□ 1.44
Chpf-202ENSMUST00000094818 Chic1Q8CBW7 227 aa24.02■■□□□ 1.44
Chpf-202ENSMUST00000094818 Sall2Q9QX96 1004 aa23.9■■□□□ 1.42
Chpf-202ENSMUST00000094818 Csrnp3P59055 597 aa23.88■■□□□ 1.41
Chpf-202ENSMUST00000094818 Ppargc1bQ8VHJ7 1014 aa23.87■■□□□ 1.41
Chpf-202ENSMUST00000094818 Las1lA2BE28 776 aaKnown RBP23.86■■□□□ 1.41
Chpf-202ENSMUST00000094818 1700123L14RikQ3V2K7 440 aa23.84■■□□□ 1.41
Chpf-202ENSMUST00000094818 Cecr2E9Q2Z1 1453 aa23.77■■□□□ 1.4
Chpf-202ENSMUST00000094818 Sycp2Q9CUU3 1500 aa23.73■■□□□ 1.39
Chpf-202ENSMUST00000094818 Wdr66E9Q743 1299 aa23.72■■□□□ 1.39
Chpf-202ENSMUST00000094818 Gm38655A0A286YDK6 273 aa23.71■■□□□ 1.39
Chpf-202ENSMUST00000094818 Mier1Q5UAK0 511 aa23.71■■□□□ 1.39
Chpf-202ENSMUST00000094818 Smarca2Q6DIC0 1577 aa23.61■■□□□ 1.37
Chpf-202ENSMUST00000094818 Rsf1E9PWW9 1441 aaKnown RBP23.54■■□□□ 1.36
Chpf-202ENSMUST00000094818 NefmP08553 848 aa23.51■■□□□ 1.35
Chpf-202ENSMUST00000094818 Myt1lP97500 1187 aa23.46■■□□□ 1.35
Chpf-202ENSMUST00000094818 Ccdc88bQ4QRL3 1481 aa23.45■■□□□ 1.34
Chpf-202ENSMUST00000094818 Anks4bQ8K3X6 423 aa23.45■■□□□ 1.34
Chpf-202ENSMUST00000094818 Aebp2Q9Z248 504 aaKnown RBP23.41■■□□□ 1.34
Chpf-202ENSMUST00000094818 Cep164Q5DU05 1446 aa23.39■■□□□ 1.34
Chpf-202ENSMUST00000094818 UbtfP25976 765 aaKnown RBP23.36■■□□□ 1.33
Chpf-202ENSMUST00000094818 Brd4Q9ESU6 1400 aaKnown RBP23.35■■□□□ 1.33
Chpf-202ENSMUST00000094818 BicraF8VPZ9 1578 aa23.31■■□□□ 1.32
Chpf-202ENSMUST00000094818 Crybg2B7ZCC2 1516 aa23.29■■□□□ 1.32
Chpf-202ENSMUST00000094818 Cdk11bP24788 784 aaKnown RBP23.28■■□□□ 1.32
Chpf-202ENSMUST00000094818 Synj1Q8CHC4 1574 aa23.27■■□□□ 1.32
Chpf-202ENSMUST00000094818 Nop58Q6DFW4 536 aaKnown RBP23.27■■□□□ 1.31
Chpf-202ENSMUST00000094818 CenpbP27790 599 aa23.24■■□□□ 1.31
Chpf-202ENSMUST00000094818 Il27Q8K3I6 234 aa23.24■■□□□ 1.31
Chpf-202ENSMUST00000094818 Npm2Q80W85 207 aa23.15■■□□□ 1.3
Chpf-202ENSMUST00000094818 Golga3P55937 1487 aa23.14■■□□□ 1.3
Chpf-202ENSMUST00000094818 CftrP26361 1476 aa23.08■■□□□ 1.29
Chpf-202ENSMUST00000094818 Aplp2Q06335 707 aa23■■□□□ 1.27
Chpf-202ENSMUST00000094818 Ap3b1Q9Z1T1 1105 aa22.94■■□□□ 1.26
Chpf-202ENSMUST00000094818 Mapk8ip2Q9ERE9 830 aa22.93■■□□□ 1.26
Chpf-202ENSMUST00000094818 ClspnQ80YR7 1315 aa22.91■■□□□ 1.26
Chpf-202ENSMUST00000094818 Plekhg3Q4VAC9 1341 aa22.85■■□□□ 1.25
Chpf-202ENSMUST00000094818 SafbD3YXK2 937 aaKnown RBP22.83■■□□□ 1.25
Chpf-202ENSMUST00000094818 Fam71e1A1L3C1 212 aa22.73■■□□□ 1.23
Chpf-202ENSMUST00000094818 DiexfQ8BTT6 772 aaKnown RBP22.71■■□□□ 1.23
Chpf-202ENSMUST00000094818 Cc2d2aQ8CFW7 1633 aa22.7■■□□□ 1.23
Chpf-202ENSMUST00000094818 TonslQ6NZL6 1363 aa22.7■■□□□ 1.23
Chpf-202ENSMUST00000094818 Myt1Q8CFC2 1127 aa22.68■■□□□ 1.22
Chpf-202ENSMUST00000094818 Smarca4Q3TKT4 1613 aaKnown RBP22.67■■□□□ 1.22
Chpf-202ENSMUST00000094818 Hnrnpul2Q00PI9 745 aaKnown RBP22.66■■□□□ 1.22
Chpf-202ENSMUST00000094818 Eid3Q3V124 375 aa22.59■■□□□ 1.21
Chpf-202ENSMUST00000094818 Cttnbp2B9EJA2 1648 aa22.58■■□□□ 1.2
Chpf-202ENSMUST00000094818 Rapgef2Q8CHG7 1496 aa22.54■■□□□ 1.2
Chpf-202ENSMUST00000094818 Bcl11aQ9QYE3 773 aa22.54■■□□□ 1.2
Chpf-202ENSMUST00000094818 Iqgap2Q3UQ44 1575 aa22.51■■□□□ 1.19
Chpf-202ENSMUST00000094818 Top2bQ64511 1612 aa22.46■■□□□ 1.19
Chpf-202ENSMUST00000094818 Kif15Q6P9L6 1387 aa22.42■■□□□ 1.18
Chpf-202ENSMUST00000094818 Ifnlr1Q8CGK5 535 aa22.41■■□□□ 1.18
Chpf-202ENSMUST00000094818 Cep162Q6ZQ06 1403 aa22.4■■□□□ 1.18
Chpf-202ENSMUST00000094818 Lmod2Q3UHZ5 550 aa22.39■■□□□ 1.18
Chpf-202ENSMUST00000094818 Clip1Q922J3 1391 aa22.39■■□□□ 1.18
Chpf-202ENSMUST00000094818 Fmn1Q05860 1466 aa22.38■■□□□ 1.17
Chpf-202ENSMUST00000094818 Atad2bE9Q166 1460 aaKnown RBP22.36■■□□□ 1.17
Chpf-202ENSMUST00000094818 Ubl4bQ9CQ84 188 aa22.33■■□□□ 1.16
Chpf-202ENSMUST00000094818 Slc24a1Q91WD8 1130 aa22.28■■□□□ 1.16
Chpf-202ENSMUST00000094818 Pds5bQ4VA53 1446 aaKnown RBP22.27■■□□□ 1.16
Chpf-202ENSMUST00000094818 PtprkP35822 1457 aa22.27■■□□□ 1.16
Chpf-202ENSMUST00000094818 Frmpd1A2AKB4 1549 aa22.22■■□□□ 1.15
Chpf-202ENSMUST00000094818 Npm1Q61937 292 aaKnown RBP22.21■■□□□ 1.15
Chpf-202ENSMUST00000094818 Top2aQ01320 1528 aaKnown RBP22.21■■□□□ 1.15
Chpf-202ENSMUST00000094818 PrkcshO08795 521 aa22.19■■□□□ 1.14
Chpf-202ENSMUST00000094818 Fam50aQ9WV03 339 aaKnown RBP22.17■■□□□ 1.14
Chpf-202ENSMUST00000094818 Tnnt3Q9QZ47 272 aa22.14■■□□□ 1.13
Chpf-202ENSMUST00000094818 Ttbk1Q6PCN3 1308 aa22.11■■□□□ 1.13
Chpf-202ENSMUST00000094818 Setd5Q5XJV7 1441 aa22.05■■□□□ 1.12
Chpf-202ENSMUST00000094818 Ercc6F8VPZ5 1481 aa22.04■■□□□ 1.12
Chpf-202ENSMUST00000094818 Dnajc5bQ9CQ94 199 aa22.03■■□□□ 1.12
Chpf-202ENSMUST00000094818 Nolc1E9Q5C9 702 aaKnown RBP22.01■■□□□ 1.11
Chpf-202ENSMUST00000094818 Anp32aO35381 247 aa22.01■■□□□ 1.11
Retrieved 100 of 22,080 RNA–protein pairs in 207.4 ms