RNA–Protein interactions for RNA: ENSMUST00000019649.3

Ubb-201, Transcript of Polyubiquitin-B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubb, Length 1,499 nt, Biotype protein coding, Subcellular localisation Axon, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubb-201ENSMUST00000019649 Trav4n-4A0A075B615 110 aa10.53□□□□□ -0.72
Ubb-201ENSMUST00000019649 Zfp951A0A087WRH0 451 aa10.53□□□□□ -0.72
Ubb-201ENSMUST00000019649 4930546C10RikE9Q4Y3 121 aa10.53□□□□□ -0.72
Ubb-201ENSMUST00000019649 Smim1P0C8K7 78 aa10.52□□□□□ -0.73
Ubb-201ENSMUST00000019649 Pgpep1Q9ESW8 209 aa10.52□□□□□ -0.73
Ubb-201ENSMUST00000019649 Gm42674D3YUT9 64 aa10.51□□□□□ -0.73
Ubb-201ENSMUST00000019649 Gm28051J3QMA2 81 aa10.51□□□□□ -0.73
Ubb-201ENSMUST00000019649 Ighv13-2A0A0A6YWN3 119 aa10.5□□□□□ -0.73
Ubb-201ENSMUST00000019649 Gm10542F6XDR3 90 aa10.5□□□□□ -0.73
Ubb-201ENSMUST00000019649 SrarpQ3ULG3 163 aa10.5□□□□□ -0.73
Ubb-201ENSMUST00000019649 Defb40Q70KL2 73 aa10.5□□□□□ -0.73
Ubb-201ENSMUST00000019649 Defa15P50713 93 aa10.49□□□□□ -0.73
Ubb-201ENSMUST00000019649 Tal2Q62282 108 aa10.49□□□□□ -0.73
Ubb-201ENSMUST00000019649 Dpm2Q9Z324 84 aa10.49□□□□□ -0.73
Ubb-201ENSMUST00000019649 Gm44965A0A0N4SVR3 59 aa10.49□□□□□ -0.73
Ubb-201ENSMUST00000019649 Vamp8O70404 101 aa10.49□□□□□ -0.73
Ubb-201ENSMUST00000019649 Defa1P11477 93 aa10.49□□□□□ -0.73
Ubb-201ENSMUST00000019649 Gm4064A0A087WR82 380 aa10.48□□□□□ -0.73
Ubb-201ENSMUST00000019649 Gm10352B2RWR6 380 aa10.48□□□□□ -0.73
Ubb-201ENSMUST00000019649 Rbmy1a1O35698 380 aa10.48□□□□□ -0.73
Ubb-201ENSMUST00000019649 Rbmy1bQ60990 380 aa10.48□□□□□ -0.73
Ubb-201ENSMUST00000019649 Isg15Q64339 161 aaKnown RBP10.48□□□□□ -0.73
Ubb-201ENSMUST00000019649 Mfap4Q9D1H9 257 aa10.48□□□□□ -0.73
Ubb-201ENSMUST00000019649 Erg28Q9ERY9 140 aa10.48□□□□□ -0.73
Ubb-201ENSMUST00000019649 Hsbp1l1B2RXB2 72 aa10.47□□□□□ -0.73
Ubb-201ENSMUST00000019649 Prh1P05142 261 aa10.47□□□□□ -0.73
Ubb-201ENSMUST00000019649 Rpl13aP19253 203 aaKnown RBP10.47□□□□□ -0.73
Ubb-201ENSMUST00000019649 Tm4sf20Q9CQY8 226 aa10.47□□□□□ -0.73
Ubb-201ENSMUST00000019649 9430069I07RikQ9CX21 111 aa10.47□□□□□ -0.73
Ubb-201ENSMUST00000019649 Gm11444F6QMA6 170 aa10.46□□□□□ -0.74
Ubb-201ENSMUST00000019649 Defb45Q3V490 66 aa10.46□□□□□ -0.74
Ubb-201ENSMUST00000019649 Vmn1r197Q8R265 298 aa10.46□□□□□ -0.74
Ubb-201ENSMUST00000019649 BaalcQ8VHV1 145 aa10.46□□□□□ -0.74
Ubb-201ENSMUST00000019649 Tmem223Q9CQE2 199 aaKnown RBP10.46□□□□□ -0.74
Ubb-201ENSMUST00000019649 Gm45753A0A1C7CYU8 86 aa10.45□□□□□ -0.74
Ubb-201ENSMUST00000019649 BC107364E9Q5A2 140 aa10.45□□□□□ -0.74
Ubb-201ENSMUST00000019649 Defa22Q8C1N8 93 aa10.45□□□□□ -0.74
Ubb-201ENSMUST00000019649 Prelid3aQ8VE85 172 aa10.45□□□□□ -0.74
Ubb-201ENSMUST00000019649 4930442H23RikQ9D5G7 103 aa10.45□□□□□ -0.74
Ubb-201ENSMUST00000019649 Gm29289A0A087WPY7 166 aa10.44□□□□□ -0.74
Ubb-201ENSMUST00000019649 Krtap11-1E9Q2E9 183 aa10.44□□□□□ -0.74
Ubb-201ENSMUST00000019649 Ighv1-61P01749 117 aa10.44□□□□□ -0.74
Ubb-201ENSMUST00000019649 S100a8P27005 89 aa10.44□□□□□ -0.74
Ubb-201ENSMUST00000019649 Hnrnpa3Q8BG05 379 aaKnown RBP10.44□□□□□ -0.74
Ubb-201ENSMUST00000019649 Q9DAA3 117 aa10.44□□□□□ -0.74
Ubb-201ENSMUST00000019649 Tax1bp3Q9DBG9 124 aa10.44□□□□□ -0.74
Ubb-201ENSMUST00000019649 Ighv1-62-1A0A075B5U3 116 aa10.43□□□□□ -0.74
Ubb-201ENSMUST00000019649 Gm11213A0A1B0GR83 88 aa10.43□□□□□ -0.74
Ubb-201ENSMUST00000019649 Smim13E9Q942 88 aa10.43□□□□□ -0.74
Ubb-201ENSMUST00000019649 Gm9242J3QNY1 357 aa10.43□□□□□ -0.74
Ubb-201ENSMUST00000019649 Krtap13O88375 197 aa10.43□□□□□ -0.74
Ubb-201ENSMUST00000019649 Ss18l2Q9D174 77 aa10.43□□□□□ -0.74
Ubb-201ENSMUST00000019649 AponG3X9D6 251 aa10.42□□□□□ -0.74
Ubb-201ENSMUST00000019649 Defa16P50714 93 aa10.42□□□□□ -0.74
Ubb-201ENSMUST00000019649 4930556J24RikQ9D4U7 146 aa10.42□□□□□ -0.74
Ubb-201ENSMUST00000019649 Fgf23Q9EPC2 251 aa10.42□□□□□ -0.74
Ubb-201ENSMUST00000019649 Trav7-6A0A075B640 112 aa10.42□□□□□ -0.74
Ubb-201ENSMUST00000019649 Trav4-3A0A0B4J1K1 110 aa10.42□□□□□ -0.74
Ubb-201ENSMUST00000019649 P01823 113 aa10.42□□□□□ -0.74
Ubb-201ENSMUST00000019649 Tnp2P11378 117 aa10.42□□□□□ -0.74
Ubb-201ENSMUST00000019649 Cd33Q63994 403 aa10.42□□□□□ -0.74
Ubb-201ENSMUST00000019649 Gm5617Q91VN2 117 aa10.42□□□□□ -0.74
Ubb-201ENSMUST00000019649 Triap1Q9D8Z2 76 aa10.42□□□□□ -0.74
Ubb-201ENSMUST00000019649 Lect2O88803 151 aa10.41□□□□□ -0.74
Ubb-201ENSMUST00000019649 Prp2P05143 317 aa10.41□□□□□ -0.74
Ubb-201ENSMUST00000019649 Sprr1bQ62267 153 aa10.41□□□□□ -0.74
Ubb-201ENSMUST00000019649 Igkv3-12A0A140T8P0 119 aa10.4□□□□□ -0.74
Ubb-201ENSMUST00000019649 Gm10837Q3UTT8 145 aa10.4□□□□□ -0.74
Ubb-201ENSMUST00000019649 Igkv6-13A0A0G2JGY3 119 aa10.39□□□□□ -0.75
Ubb-201ENSMUST00000019649 Gm35549A0A0N4SUS7 141 aa10.39□□□□□ -0.75
Ubb-201ENSMUST00000019649 Tmem238A9JSM3 176 aa10.39□□□□□ -0.75
Ubb-201ENSMUST00000019649 Plscr4P58196 326 aa10.39□□□□□ -0.75
Ubb-201ENSMUST00000019649 Gm20730A0A075B5J6 119 aa10.38□□□□□ -0.75
Ubb-201ENSMUST00000019649 Trav13-4-dv7A0A075B6C2 110 aa10.38□□□□□ -0.75
Ubb-201ENSMUST00000019649 Ighv2-9-1A0A075B697 116 aa10.37□□□□□ -0.75
Ubb-201ENSMUST00000019649 CnbpP53996 178 aaKnown RBP10.37□□□□□ -0.75
Ubb-201ENSMUST00000019649 G0s2Q61585 103 aa10.37□□□□□ -0.75
Ubb-201ENSMUST00000019649 Zfand2aQ9JII7 171 aa10.37□□□□□ -0.75
Ubb-201ENSMUST00000019649 Kmt2cQ8BRH4 4903 aa10.37□□□□□ -0.75
Ubb-201ENSMUST00000019649 Iglc1A0A0G2JE99 106 aa10.36□□□□□ -0.75
Ubb-201ENSMUST00000019649 Trav13d-4A0A0G2JFX3 110 aa10.36□□□□□ -0.75
Ubb-201ENSMUST00000019649 Fam104aA2A6P4 185 aa10.36□□□□□ -0.75
Ubb-201ENSMUST00000019649 Defa9P50707 93 aa10.36□□□□□ -0.75
Ubb-201ENSMUST00000019649 Ighv2-9A0A075B5Q5 116 aa10.36□□□□□ -0.75
Ubb-201ENSMUST00000019649 Trav11A0A0B4J1J9 114 aa10.36□□□□□ -0.75
Ubb-201ENSMUST00000019649 Rmi2Q3UPE3 149 aa10.36□□□□□ -0.75
Ubb-201ENSMUST00000019649 Bsph2Q0Q236 131 aa10.35□□□□□ -0.75
Ubb-201ENSMUST00000019649 4930432M17RikQ3V0W9 174 aa10.35□□□□□ -0.75
Ubb-201ENSMUST00000019649 Smr3aQ61900 147 aa10.35□□□□□ -0.75
Ubb-201ENSMUST00000019649 ScxQ64124 207 aa10.35□□□□□ -0.75
Ubb-201ENSMUST00000019649 Ndufa12Q7TMF3 145 aaKnown RBP10.34□□□□□ -0.75
Ubb-201ENSMUST00000019649 Gemin7Q9CWY4 129 aa10.34□□□□□ -0.75
Ubb-201ENSMUST00000019649 Dnah8Q91XQ0 4731 aa10.33□□□□□ -0.76
Ubb-201ENSMUST00000019649 C920008G01RikA0A0B4J1N1 112 aa10.33□□□□□ -0.76
Ubb-201ENSMUST00000019649 Gm6812B1AXU1 112 aa10.33□□□□□ -0.76
Ubb-201ENSMUST00000019649 Timm17bQ9Z0V7 172 aa10.33□□□□□ -0.76
Ubb-201ENSMUST00000019649 Trav4d-3A0A075B625 110 aa10.32□□□□□ -0.76
Ubb-201ENSMUST00000019649 Trav9n-4A0A075B631 113 aa10.32□□□□□ -0.76
Ubb-201ENSMUST00000019649 BtcQ05928 177 aa10.32□□□□□ -0.76
Ubb-201ENSMUST00000019649 1700012A03RikQ9DAF1 130 aa10.32□□□□□ -0.76
Retrieved 100 of 22,080 RNA–protein pairs in 51.3 ms