RNA–Protein interactions for RNA: ENSMUST00000225246.1

Ssr1-203, Transcript of Translocon-associated protein subunit alpha, mousemouse

BASIC

Gene Ssr1, Length 1,825 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1-203ENSMUST00000225246 Plac8l1Q08EJ0 177 aa9.35□□□□□ -0.91
Ssr1-203ENSMUST00000225246 TeppQ6IMH0 216 aa9.35□□□□□ -0.91
Ssr1-203ENSMUST00000225246 Gm11020F6ZGD5 61 aa9.34□□□□□ -0.91
Ssr1-203ENSMUST00000225246 Lst1O08843 95 aa9.34□□□□□ -0.91
Ssr1-203ENSMUST00000225246 Lage3Q9CR70 148 aa9.34□□□□□ -0.91
Ssr1-203ENSMUST00000225246 Cd164l2Q9D6W7 172 aa9.34□□□□□ -0.91
Ssr1-203ENSMUST00000225246 Helz2E9QAM5 2947 aaKnown RBP9.34□□□□□ -0.91
Ssr1-203ENSMUST00000225246 Trav13n-1A0A0G2JEU8 110 aa9.33□□□□□ -0.92
Ssr1-203ENSMUST00000225246 Defb42Q8BVB5 75 aa9.33□□□□□ -0.92
Ssr1-203ENSMUST00000225246 Gm4861Q8C5A4 106 aa9.33□□□□□ -0.92
Ssr1-203ENSMUST00000225246 SonQ9QX47 2444 aaKnown RBP9.33□□□□□ -0.92
Ssr1-203ENSMUST00000225246 Qrich2A0A140LIY9 2337 aa9.33□□□□□ -0.92
Ssr1-203ENSMUST00000225246 Dmbt1Q60997 2085 aa9.33□□□□□ -0.92
Ssr1-203ENSMUST00000225246 Cep192E9Q4Y4 2514 aaKnown RBP9.33□□□□□ -0.92
Ssr1-203ENSMUST00000225246 1700011M02RikB1AX35 88 aa9.33□□□□□ -0.92
Ssr1-203ENSMUST00000225246 Scgb1b2O35176 93 aa9.33□□□□□ -0.92
Ssr1-203ENSMUST00000225246 Gm9922Q8C3P1 144 aa9.33□□□□□ -0.92
Ssr1-203ENSMUST00000225246 Chchd7Q8K2Q5 85 aa9.33□□□□□ -0.92
Ssr1-203ENSMUST00000225246 MalO09198 153 aa9.32□□□□□ -0.92
Ssr1-203ENSMUST00000225246 SelenowP63300 88 aa9.32□□□□□ -0.92
Ssr1-203ENSMUST00000225246 PemtQ61907 199 aa9.32□□□□□ -0.92
Ssr1-203ENSMUST00000225246 BB014433Q8C5R5 389 aa9.32□□□□□ -0.92
Ssr1-203ENSMUST00000225246 Rpl28P41105 137 aaKnown RBP9.31□□□□□ -0.92
Ssr1-203ENSMUST00000225246 P01729 129 aa9.31□□□□□ -0.92
Ssr1-203ENSMUST00000225246 P01745 121 aa9.31□□□□□ -0.92
Ssr1-203ENSMUST00000225246 Tm2d2Q8R0I4 213 aa9.31□□□□□ -0.92
Ssr1-203ENSMUST00000225246 Lypd5Q9D7Z7 256 aa9.31□□□□□ -0.92
Ssr1-203ENSMUST00000225246 Akap6E9Q9K8 2307 aa9.3□□□□□ -0.92
Ssr1-203ENSMUST00000225246 Abca12E9Q876 2595 aa9.3□□□□□ -0.92
Ssr1-203ENSMUST00000225246 Acyp1P56376 99 aa9.3□□□□□ -0.92
Ssr1-203ENSMUST00000225246 Myo18bE9PV66 2605 aa9.3□□□□□ -0.92
Ssr1-203ENSMUST00000225246 Ighv2-9-1A0A075B697 116 aa9.29□□□□□ -0.92
Ssr1-203ENSMUST00000225246 Rnase1P00683 149 aa9.29□□□□□ -0.92
Ssr1-203ENSMUST00000225246 Vmo1Q5SXG7 201 aa9.29□□□□□ -0.92
Ssr1-203ENSMUST00000225246 5730596B20RikQ8BQ08 205 aa9.28□□□□□ -0.92
Ssr1-203ENSMUST00000225246 Ndufa3Q9CQ91 84 aa9.28□□□□□ -0.92
Ssr1-203ENSMUST00000225246 Spry2Q9QXV8 315 aa9.28□□□□□ -0.92
Ssr1-203ENSMUST00000225246 C2cd3Q52KB6 2323 aa9.28□□□□□ -0.92
Ssr1-203ENSMUST00000225246 Trav14d-3-dv8A0A075B619 120 aa9.28□□□□□ -0.92
Ssr1-203ENSMUST00000225246 Atp5g1Q9CR84 136 aa9.28□□□□□ -0.92
Ssr1-203ENSMUST00000225246 Gm7075D3Z497 112 aa9.27□□□□□ -0.93
Ssr1-203ENSMUST00000225246 GfyJ3KML8 504 aa9.27□□□□□ -0.93
Ssr1-203ENSMUST00000225246 Znf740Q6NZQ6 180 aa9.27□□□□□ -0.93
Ssr1-203ENSMUST00000225246 Gm9913Q8BQQ2 135 aa9.27□□□□□ -0.93
Ssr1-203ENSMUST00000225246 Trav11A0A0B4J1J9 114 aa9.26□□□□□ -0.93
Ssr1-203ENSMUST00000225246 Gm10772F7AIG4 85 aa9.26□□□□□ -0.93
Ssr1-203ENSMUST00000225246 Xcl1P47993 114 aa9.26□□□□□ -0.93
Ssr1-203ENSMUST00000225246 Ppp1r32Q148A4 427 aa9.26□□□□□ -0.93
Ssr1-203ENSMUST00000225246 Defb50Q6TU36 73 aa9.26□□□□□ -0.93
Ssr1-203ENSMUST00000225246 MobpQ9D2P8 170 aa9.26□□□□□ -0.93
Ssr1-203ENSMUST00000225246 Spata25Q9DA57 226 aa9.26□□□□□ -0.93
Ssr1-203ENSMUST00000225246 Esm1Q9QYY7 184 aa9.26□□□□□ -0.93
Ssr1-203ENSMUST00000225246 OtogO55225 2910 aa9.26□□□□□ -0.93
Ssr1-203ENSMUST00000225246 Gm9513B3GLJ6 99 aa9.26□□□□□ -0.93
Ssr1-203ENSMUST00000225246 Smim20D3Z7Q2 69 aa9.26□□□□□ -0.93
Ssr1-203ENSMUST00000225246 Cox6b1P56391 86 aaKnown RBP9.26□□□□□ -0.93
Ssr1-203ENSMUST00000225246 Pglyrp4Q0VB07 374 aa9.26□□□□□ -0.93
Ssr1-203ENSMUST00000225246 Zfand2aQ9JII7 171 aa9.26□□□□□ -0.93
Ssr1-203ENSMUST00000225246 Apoc4Q61268 124 aa9.25□□□□□ -0.93
Ssr1-203ENSMUST00000225246 4930524J08RikQ9CUJ5 163 aa9.25□□□□□ -0.93
Ssr1-203ENSMUST00000225246 PkigO70139 76 aa9.24□□□□□ -0.93
Ssr1-203ENSMUST00000225246 Spink10Q8CAC8 162 aa9.24□□□□□ -0.93
Ssr1-203ENSMUST00000225246 Avpi1Q9D7H4 142 aa9.24□□□□□ -0.93
Ssr1-203ENSMUST00000225246 LystP97412 3788 aa9.24□□□□□ -0.93
Ssr1-203ENSMUST00000225246 Abca2P41234 2434 aa9.24□□□□□ -0.93
Ssr1-203ENSMUST00000225246 Gm43218A0A0G2JGT0 114 aa9.24□□□□□ -0.93
Ssr1-203ENSMUST00000225246 Gm7849D3YX03 116 aa9.24□□□□□ -0.93
Ssr1-203ENSMUST00000225246 PrlhG3UWC3 86 aa9.24□□□□□ -0.93
Ssr1-203ENSMUST00000225246 Gpha2Q925Q5 128 aa9.24□□□□□ -0.93
Ssr1-203ENSMUST00000225246 Ss18l2Q9D174 77 aa9.24□□□□□ -0.93
Ssr1-203ENSMUST00000225246 Igkv4-72A0A0B4J1I4 117 aa9.23□□□□□ -0.93
Ssr1-203ENSMUST00000225246 Trav9d-4A0A0G2JG37 103 aa9.23□□□□□ -0.93
Ssr1-203ENSMUST00000225246 Spink1P09036 80 aa9.23□□□□□ -0.93
Ssr1-203ENSMUST00000225246 RetnQ99P87 114 aa9.23□□□□□ -0.93
Ssr1-203ENSMUST00000225246 Nop10Q9CQS2 64 aa9.23□□□□□ -0.93
Ssr1-203ENSMUST00000225246 Trav3-4A0A075B654 114 aa9.22□□□□□ -0.93
Ssr1-203ENSMUST00000225246 Ighv1-56A0A0A6YXG2 117 aa9.22□□□□□ -0.93
Ssr1-203ENSMUST00000225246 Lyrm9Q3UN90 78 aa9.21□□□□□ -0.93
Ssr1-203ENSMUST00000225246 CdsnQ7TPC1 561 aa9.21□□□□□ -0.93
Ssr1-203ENSMUST00000225246 Muc4Q8JZM8 3443 aa9.21□□□□□ -0.94
Ssr1-203ENSMUST00000225246 Igkv1-117A0A140T8M0 119 aa9.21□□□□□ -0.94
Ssr1-203ENSMUST00000225246 Gm16381A0A1Y7VKT9 73 aa9.21□□□□□ -0.94
Ssr1-203ENSMUST00000225246 Crlf1Q9JM58 425 aa9.21□□□□□ -0.94
Ssr1-203ENSMUST00000225246 Chd6A3KFM7 2711 aa9.21□□□□□ -0.94
Ssr1-203ENSMUST00000225246 OtoglF7A4A7 2325 aa9.2□□□□□ -0.94
Ssr1-203ENSMUST00000225246 Trav13-4-dv7A0A075B6C2 110 aa9.2□□□□□ -0.94
Ssr1-203ENSMUST00000225246 Gm10647E9Q8X0 124 aa9.2□□□□□ -0.94
Ssr1-203ENSMUST00000225246 Hist1h4aP62806 103 aaKnown RBP9.2□□□□□ -0.94
Ssr1-203ENSMUST00000225246 Ndufa12Q7TMF3 145 aaKnown RBP9.2□□□□□ -0.94
Ssr1-203ENSMUST00000225246 Ccl21aP84444 133 aa9.19□□□□□ -0.94
Ssr1-203ENSMUST00000225246 Ccl21bP86792 133 aa9.19□□□□□ -0.94
Ssr1-203ENSMUST00000225246 Ccl21cP86793 133 aa9.19□□□□□ -0.94
Ssr1-203ENSMUST00000225246 Trav9d-3A0A075B695 113 aa9.19□□□□□ -0.94
Ssr1-203ENSMUST00000225246 Gm5089A1L3C8 106 aa9.19□□□□□ -0.94
Ssr1-203ENSMUST00000225246 Psors1c2Q80ZC9 134 aa9.19□□□□□ -0.94
Ssr1-203ENSMUST00000225246 4930519P11RikQ9CUJ8 166 aa9.19□□□□□ -0.94
Ssr1-203ENSMUST00000225246 9530053A07RikE9PVG8 2581 aa9.18□□□□□ -0.94
Ssr1-203ENSMUST00000225246 Prss58Q8BW11 241 aa9.18□□□□□ -0.94
Ssr1-203ENSMUST00000225246 4930544G11RikQ9CR99 193 aa9.18□□□□□ -0.94
Ssr1-203ENSMUST00000225246 Sprr1bQ62267 153 aa9.17□□□□□ -0.94
Retrieved 100 of 22,080 RNA–protein pairs in 686.9 ms