RNA–Protein interactions for RNA: ENSMUST00000077489.11

Scn1a-201, Transcript of Sodium channel protein type 1 subunit alpha, mousemouse

APPRIS P3 TSL 5 BASIC

Gene Scn1a, Length 8,116 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1a-201ENSMUST00000077489 AcacaQ5SWU9 2345 aa4.82□□□□□ -1.64
Scn1a-201ENSMUST00000077489 Sdk2Q6V4S5 2176 aa4.82□□□□□ -1.64
Scn1a-201ENSMUST00000077489 Polr2kQ63871 58 aa4.82□□□□□ -1.64
Scn1a-201ENSMUST00000077489 5730596B20RikQ8BQ08 205 aa4.82□□□□□ -1.64
Scn1a-201ENSMUST00000077489 4930564D02RikQ9D4S4 103 aa4.82□□□□□ -1.64
Scn1a-201ENSMUST00000077489 Pkd1l3Q2EG98 2201 aa4.82□□□□□ -1.64
Scn1a-201ENSMUST00000077489 Obox2E9PXV9 151 aa4.82□□□□□ -1.64
Scn1a-201ENSMUST00000077489 Gm10509O88255 85 aa4.82□□□□□ -1.64
Scn1a-201ENSMUST00000077489 Defb13Q8R2I4 64 aa4.82□□□□□ -1.64
Scn1a-201ENSMUST00000077489 Krtap27-1E9PX37 202 aa4.82□□□□□ -1.64
Scn1a-201ENSMUST00000077489 Fhl2O70433 279 aa4.82□□□□□ -1.64
Scn1a-201ENSMUST00000077489 Gm6899Q3USS0 134 aa4.82□□□□□ -1.64
Scn1a-201ENSMUST00000077489 Igkv8-30A0A140T8M3 121 aa4.82□□□□□ -1.64
Scn1a-201ENSMUST00000077489 C1qcQ02105 246 aa4.82□□□□□ -1.64
Scn1a-201ENSMUST00000077489 Igkv4-92A0A0B4J1I2 117 aa4.81□□□□□ -1.64
Scn1a-201ENSMUST00000077489 Gm19935A0A1B0GSF9 52 aa4.81□□□□□ -1.64
Scn1a-201ENSMUST00000077489 4930556J24RikQ9D4U7 146 aa4.81□□□□□ -1.64
Scn1a-201ENSMUST00000077489 U90926O08546 118 aa4.81□□□□□ -1.64
Scn1a-201ENSMUST00000077489 Smr3aQ61900 147 aa4.81□□□□□ -1.64
Scn1a-201ENSMUST00000077489 Ube2d3P61079 147 aa4.81□□□□□ -1.64
Scn1a-201ENSMUST00000077489 Ube2d2P62838 147 aa4.81□□□□□ -1.64
Scn1a-201ENSMUST00000077489 Wdr38Q9D994 303 aa4.81□□□□□ -1.64
Scn1a-201ENSMUST00000077489 Ighv1-62-1A0A075B5U3 116 aa4.81□□□□□ -1.64
Scn1a-201ENSMUST00000077489 1520401A03RikA0A0J9YVH6 598 aa4.81□□□□□ -1.64
Scn1a-201ENSMUST00000077489 Pcsk5Q04592 1877 aa4.81□□□□□ -1.64
Scn1a-201ENSMUST00000077489 F8Q06194 2319 aa4.81□□□□□ -1.64
Scn1a-201ENSMUST00000077489 Gm11011D3Z3L9 86 aa4.8□□□□□ -1.64
Scn1a-201ENSMUST00000077489 Col4a4Q9QZR9 1682 aa4.8□□□□□ -1.64
Scn1a-201ENSMUST00000077489 A0A286YE49 62 aa4.8□□□□□ -1.64
Scn1a-201ENSMUST00000077489 Ros1Q78DX7 2340 aa4.8□□□□□ -1.64
Scn1a-201ENSMUST00000077489 Ovol3D3YYM0 189 aa4.8□□□□□ -1.64
Scn1a-201ENSMUST00000077489 P01823 113 aa4.8□□□□□ -1.64
Scn1a-201ENSMUST00000077489 Greb1Q3UHK3 1954 aa4.8□□□□□ -1.64
Scn1a-201ENSMUST00000077489 Igkv1-117A0A140T8M0 119 aa4.8□□□□□ -1.64
Scn1a-201ENSMUST00000077489 Sprr2jO70561 109 aa4.8□□□□□ -1.64
Scn1a-201ENSMUST00000077489 Defb42Q8BVB5 75 aa4.79□□□□□ -1.64
Scn1a-201ENSMUST00000077489 Defb12Q8K4N3 78 aa4.79□□□□□ -1.64
Scn1a-201ENSMUST00000077489 Cnot1Q6ZQ08 2375 aaKnown RBP4.79□□□□□ -1.64
Scn1a-201ENSMUST00000077489 Gm9922Q8C3P1 144 aa4.79□□□□□ -1.64
Scn1a-201ENSMUST00000077489 Fam19a5Q91WE9 132 aa4.79□□□□□ -1.64
Scn1a-201ENSMUST00000077489 Rpl28P41105 137 aaKnown RBP4.79□□□□□ -1.64
Scn1a-201ENSMUST00000077489 Tet2Q4JK59 1912 aaKnown RBP4.79□□□□□ -1.64
Scn1a-201ENSMUST00000077489 Esm1Q9QYY7 184 aa4.78□□□□□ -1.64
Scn1a-201ENSMUST00000077489 Cdc42se2Q8BGH7 84 aa4.78□□□□□ -1.64
Scn1a-201ENSMUST00000077489 Ighv10-3A0A075B5T6 119 aa4.78□□□□□ -1.64
Scn1a-201ENSMUST00000077489 SbsponQ3UPR9 264 aa4.78□□□□□ -1.64
Scn1a-201ENSMUST00000077489 Gm1968Q3T9I3 115 aa4.78□□□□□ -1.64
Scn1a-201ENSMUST00000077489 SycnQ8VCK7 134 aa4.78□□□□□ -1.64
Scn1a-201ENSMUST00000077489 Gm10490F6VBM2 120 aa4.78□□□□□ -1.64
Scn1a-201ENSMUST00000077489 P01755 137 aa4.78□□□□□ -1.64
Scn1a-201ENSMUST00000077489 Znf575Q3TXZ1 239 aa4.78□□□□□ -1.65
Scn1a-201ENSMUST00000077489 Serp1Q9Z1W5 66 aa4.78□□□□□ -1.65
Scn1a-201ENSMUST00000077489 Csdc2Q91YQ3 154 aa4.77□□□□□ -1.65
Scn1a-201ENSMUST00000077489 Dopey1Q8BL99 2399 aa4.77□□□□□ -1.65
Scn1a-201ENSMUST00000077489 1700011M02RikB1AX35 88 aa4.77□□□□□ -1.65
Scn1a-201ENSMUST00000077489 H2al1kJ3QP08 105 aa4.77□□□□□ -1.65
Scn1a-201ENSMUST00000077489 2010109I03RikQ9CQ11 111 aa4.77□□□□□ -1.65
Scn1a-201ENSMUST00000077489 Pla2g1bQ9Z0Y2 146 aa4.77□□□□□ -1.65
Scn1a-201ENSMUST00000077489 Gm17509Q9CZ61 145 aa4.77□□□□□ -1.65
Scn1a-201ENSMUST00000077489 NpwA0A1L1STR8 176 aa4.76□□□□□ -1.65
Scn1a-201ENSMUST00000077489 Shisa2Q8QZV2 295 aa4.76□□□□□ -1.65
Scn1a-201ENSMUST00000077489 Cspg4Q8VHY0 2327 aa4.76□□□□□ -1.65
Scn1a-201ENSMUST00000077489 Ighv8-13A0A075B5Y0 101 aa4.76□□□□□ -1.65
Scn1a-201ENSMUST00000077489 Trav14-1A0A0G2JF94 121 aa4.76□□□□□ -1.65
Scn1a-201ENSMUST00000077489 Ncoa6Q9JL19 2067 aa4.76□□□□□ -1.65
Scn1a-201ENSMUST00000077489 PtprsB0V2N1 1907 aa4.76□□□□□ -1.65
Scn1a-201ENSMUST00000077489 NrgnP60761 78 aa4.76□□□□□ -1.65
Scn1a-201ENSMUST00000077489 Nupr2Q497P3 102 aa4.76□□□□□ -1.65
Scn1a-201ENSMUST00000077489 P06329 120 aa4.76□□□□□ -1.65
Scn1a-201ENSMUST00000077489 Trip12G5E870 2025 aaKnown RBP4.76□□□□□ -1.65
Scn1a-201ENSMUST00000077489 AgrnA2ASQ1 1950 aa4.76□□□□□ -1.65
Scn1a-201ENSMUST00000077489 Q9DAB9 146 aa4.76□□□□□ -1.65
Scn1a-201ENSMUST00000077489 Gm9573F7C950 1606 aa4.76□□□□□ -1.65
Scn1a-201ENSMUST00000077489 BtcQ05928 177 aa4.75□□□□□ -1.65
Scn1a-201ENSMUST00000077489 Cacna1gQ5SUF7 2381 aa4.75□□□□□ -1.65
Scn1a-201ENSMUST00000077489 LhbO09108 141 aa4.75□□□□□ -1.65
Scn1a-201ENSMUST00000077489 P84750 121 aa4.75□□□□□ -1.65
Scn1a-201ENSMUST00000077489 Igkv1-110A0A0B4J1I0 119 aa4.75□□□□□ -1.65
Scn1a-201ENSMUST00000077489 Edn2P22389 175 aa4.75□□□□□ -1.65
Scn1a-201ENSMUST00000077489 Znf580Q9DB38 172 aa4.75□□□□□ -1.65
Scn1a-201ENSMUST00000077489 Ighv2-9A0A075B5Q5 116 aa4.74□□□□□ -1.65
Scn1a-201ENSMUST00000077489 Gpha2Q925Q5 128 aa4.74□□□□□ -1.65
Scn1a-201ENSMUST00000077489 CrygfQ9CXV3 174 aa4.74□□□□□ -1.65
Scn1a-201ENSMUST00000077489 Smrp1Q2MH31 260 aa4.74□□□□□ -1.65
Scn1a-201ENSMUST00000077489 Tcf20Q9EPQ8 1987 aa4.74□□□□□ -1.65
Scn1a-201ENSMUST00000077489 Gm16223Q8CBM3 117 aa4.74□□□□□ -1.65
Scn1a-201ENSMUST00000077489 Gm5153P01627 120 aa4.73□□□□□ -1.65
Scn1a-201ENSMUST00000077489 Ndufs5Q99LY9 106 aa4.73□□□□□ -1.65
Scn1a-201ENSMUST00000077489 2310009B15RikA0A0A6YWI4 143 aa4.73□□□□□ -1.65
Scn1a-201ENSMUST00000077489 Trbv13-2A0A140T8N6 113 aa4.73□□□□□ -1.65
Scn1a-201ENSMUST00000077489 CrygeQ03740 174 aa4.73□□□□□ -1.65
Scn1a-201ENSMUST00000077489 Dennd4cA6H8H2 1906 aa4.73□□□□□ -1.65
Scn1a-201ENSMUST00000077489 A930009A15RikG3UYI6 118 aa4.73□□□□□ -1.65
Scn1a-201ENSMUST00000077489 PrlhG3UWC3 86 aa4.73□□□□□ -1.65
Scn1a-201ENSMUST00000077489 Gm10549Q3URY4 149 aa4.73□□□□□ -1.65
Scn1a-201ENSMUST00000077489 Ighv1-72P01751 139 aa4.72□□□□□ -1.65
Scn1a-201ENSMUST00000077489 HelzQ6DFV5 1964 aaKnown RBP4.72□□□□□ -1.65
Scn1a-201ENSMUST00000077489 Gm12057A0A087WR21 115 aa4.72□□□□□ -1.65
Scn1a-201ENSMUST00000077489 4930524J08RikQ9CUJ5 163 aa4.72□□□□□ -1.65
Scn1a-201ENSMUST00000077489 PscaP57096 123 aa4.72□□□□□ -1.65
Retrieved 100 of 22,080 RNA–protein pairs in 73.2 ms