RNA–Protein interactions for RNA: ENSMUST00000054384.5

Trim56-201, Transcript of E3 ubiquitin-protein ligase TRIM56, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim56, Length 9,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56-201ENSMUST00000054384 Wfdc15aQ8BH89 80 aa9.02□□□□□ -0.97
Trim56-201ENSMUST00000054384 CstadQ9D245 104 aa9.02□□□□□ -0.97
Trim56-201ENSMUST00000054384 Zfand3Q497H0 227 aa9.01□□□□□ -0.97
Trim56-201ENSMUST00000054384 Ighv1-63A0A075B5X2 117 aa9.01□□□□□ -0.97
Trim56-201ENSMUST00000054384 Gm5468Q8C3D3 155 aa9.01□□□□□ -0.97
Trim56-201ENSMUST00000054384 BaalcQ8VHV1 145 aa9.01□□□□□ -0.97
Trim56-201ENSMUST00000054384 Nsun4C4P6S0 806 aaKnown RBP9.01□□□□□ -0.97
Trim56-201ENSMUST00000054384 P01820 115 aa9.01□□□□□ -0.97
Trim56-201ENSMUST00000054384 A230072I06RikQ3UUJ8 172 aa9.01□□□□□ -0.97
Trim56-201ENSMUST00000054384 MsmpB1AWI6 139 aa9□□□□□ -0.97
Trim56-201ENSMUST00000054384 Gm21060J3KMU4 56 aa9□□□□□ -0.97
Trim56-201ENSMUST00000054384 Lypd6Q8BPP5 171 aa9□□□□□ -0.97
Trim56-201ENSMUST00000054384 P01674 108 aa9□□□□□ -0.97
Trim56-201ENSMUST00000054384 Ly6hQ9WUC3 139 aa9□□□□□ -0.97
Trim56-201ENSMUST00000054384 Ighv1-61P01749 117 aa9□□□□□ -0.97
Trim56-201ENSMUST00000054384 Gm20708H3BKF4 155 aa8.99□□□□□ -0.97
Trim56-201ENSMUST00000054384 Fam19a5Q91WE9 132 aa8.99□□□□□ -0.97
Trim56-201ENSMUST00000054384 Gm5629P06327 117 aa8.99□□□□□ -0.97
Trim56-201ENSMUST00000054384 2010109I03RikQ9CQ11 111 aa8.99□□□□□ -0.97
Trim56-201ENSMUST00000054384 Ighv8-5A0A0A6YY60 119 aa8.99□□□□□ -0.97
Trim56-201ENSMUST00000054384 Wipf1Q8K1I7 493 aa8.99□□□□□ -0.97
Trim56-201ENSMUST00000054384 Serp2Q6TAW2 65 aa8.98□□□□□ -0.97
Trim56-201ENSMUST00000054384 Wdr38Q9D994 303 aa8.98□□□□□ -0.97
Trim56-201ENSMUST00000054384 Igkv3-7A0A0G2JE31 119 aa8.98□□□□□ -0.97
Trim56-201ENSMUST00000054384 E130114P18RikF6S0S7 154 aa8.98□□□□□ -0.97
Trim56-201ENSMUST00000054384 Serp1Q9Z1W5 66 aa8.98□□□□□ -0.97
Trim56-201ENSMUST00000054384 Sprr3O09116 238 aa8.97□□□□□ -0.97
Trim56-201ENSMUST00000054384 PlaurP35456 327 aa8.97□□□□□ -0.97
Trim56-201ENSMUST00000054384 Gm5878E9PUB3 99 aa8.97□□□□□ -0.97
Trim56-201ENSMUST00000054384 PolqQ8CGS6 2544 aa8.97□□□□□ -0.97
Trim56-201ENSMUST00000054384 FshbQ60687 130 aa8.97□□□□□ -0.97
Trim56-201ENSMUST00000054384 PpdpfQ9CR37 115 aa8.97□□□□□ -0.97
Trim56-201ENSMUST00000054384 Timm17bQ9Z0V7 172 aa8.97□□□□□ -0.97
Trim56-201ENSMUST00000054384 Tcte2E9PY37 120 aa8.97□□□□□ -0.97
Trim56-201ENSMUST00000054384 Znf706Q9D115 76 aaKnown RBP8.97□□□□□ -0.97
Trim56-201ENSMUST00000054384 Col4a6B1AVK5 1691 aa8.97□□□□□ -0.97
Trim56-201ENSMUST00000054384 H2al1kJ3QP08 105 aa8.96□□□□□ -0.97
Trim56-201ENSMUST00000054384 Cox8cA6H666 72 aa8.96□□□□□ -0.97
Trim56-201ENSMUST00000054384 Obox2E9PXV9 151 aa8.96□□□□□ -0.97
Trim56-201ENSMUST00000054384 C1qcQ02105 246 aa8.96□□□□□ -0.98
Trim56-201ENSMUST00000054384 Ighv2-6-8A0A0A6YWY9 116 aa8.96□□□□□ -0.98
Trim56-201ENSMUST00000054384 P01728 117 aa8.96□□□□□ -0.98
Trim56-201ENSMUST00000054384 P18527 97 aa8.96□□□□□ -0.98
Trim56-201ENSMUST00000054384 Apoc4Q61268 124 aa8.96□□□□□ -0.98
Trim56-201ENSMUST00000054384 Q9D8Q6 235 aa8.95□□□□□ -0.98
Trim56-201ENSMUST00000054384 Ube2d1P61080 147 aaKnown RBP8.94□□□□□ -0.98
Trim56-201ENSMUST00000054384 Ighv1-5A0A0A6YWG2 117 aa8.94□□□□□ -0.98
Trim56-201ENSMUST00000054384 Gm10337F7DEP7 55 aa8.94□□□□□ -0.98
Trim56-201ENSMUST00000054384 FcorP0DJI6 106 aa8.94□□□□□ -0.98
Trim56-201ENSMUST00000054384 4930535I16RikQ9CUI2 172 aa8.94□□□□□ -0.98
Trim56-201ENSMUST00000054384 Gm6034E9Q101 117 aa8.93□□□□□ -0.98
Trim56-201ENSMUST00000054384 4930564D02RikQ9D4S4 103 aa8.93□□□□□ -0.98
Trim56-201ENSMUST00000054384 Defb40Q70KL2 73 aa8.93□□□□□ -0.98
Trim56-201ENSMUST00000054384 A0A286YE49 62 aa8.93□□□□□ -0.98
Trim56-201ENSMUST00000054384 Gm1968Q3T9I3 115 aa8.93□□□□□ -0.98
Trim56-201ENSMUST00000054384 Gm4707V9GXN5 68 aa8.92□□□□□ -0.98
Trim56-201ENSMUST00000054384 A130051J06RikQ8CAU1 227 aa8.92□□□□□ -0.98
Trim56-201ENSMUST00000054384 Ly6c2P0CW03 131 aa8.91□□□□□ -0.98
Trim56-201ENSMUST00000054384 Ube2d3P61079 147 aa8.91□□□□□ -0.98
Trim56-201ENSMUST00000054384 ScxQ64124 207 aa8.91□□□□□ -0.98
Trim56-201ENSMUST00000054384 Igkv8-28A0A0G2JE47 121 aa8.9□□□□□ -0.98
Trim56-201ENSMUST00000054384 Fgfbp3Q1HCM0 245 aa8.9□□□□□ -0.99
Trim56-201ENSMUST00000054384 CtrlQ9ER05 264 aa8.9□□□□□ -0.99
Trim56-201ENSMUST00000054384 Nupr2Q497P3 102 aa8.9□□□□□ -0.99
Trim56-201ENSMUST00000054384 Q9CX25 107 aa8.89□□□□□ -0.99
Trim56-201ENSMUST00000054384 SycnQ8VCK7 134 aa8.89□□□□□ -0.99
Trim56-201ENSMUST00000054384 Dkk4Q8VEJ3 221 aa8.89□□□□□ -0.99
Trim56-201ENSMUST00000054384 Gm11011D3Z3L9 86 aa8.89□□□□□ -0.99
Trim56-201ENSMUST00000054384 Gm9887F6RFI0 207 aa8.88□□□□□ -0.99
Trim56-201ENSMUST00000054384 Rnf185Q91YT2 192 aa8.88□□□□□ -0.99
Trim56-201ENSMUST00000054384 Col5a1O88207 1838 aa8.88□□□□□ -0.99
Trim56-201ENSMUST00000054384 Ighv1-59A0A0A6YXE0 117 aa8.87□□□□□ -0.99
Trim56-201ENSMUST00000054384 P01823 113 aa8.87□□□□□ -0.99
Trim56-201ENSMUST00000054384 Wfdc6bF6ULY1 148 aa8.87□□□□□ -0.99
Trim56-201ENSMUST00000054384 Gm19935A0A1B0GSF9 52 aa8.86□□□□□ -0.99
Trim56-201ENSMUST00000054384 Ighv2-3A0A075B696 115 aa8.86□□□□□ -0.99
Trim56-201ENSMUST00000054384 TshbP12656 138 aa8.86□□□□□ -0.99
Trim56-201ENSMUST00000054384 Gm10577Q3UDV9 132 aa8.86□□□□□ -0.99
Trim56-201ENSMUST00000054384 Wfdc13Q5DQQ6 81 aa8.86□□□□□ -0.99
Trim56-201ENSMUST00000054384 BtcQ05928 177 aa8.86□□□□□ -0.99
Trim56-201ENSMUST00000054384 Gm6899Q3USS0 134 aa8.85□□□□□ -0.99
Trim56-201ENSMUST00000054384 Spry4Q9WTP2 300 aa8.85□□□□□ -0.99
Trim56-201ENSMUST00000054384 NrgnP60761 78 aa8.85□□□□□ -0.99
Trim56-201ENSMUST00000054384 LhbO09108 141 aa8.85□□□□□ -0.99
Trim56-201ENSMUST00000054384 Sptbn4E9PX29 2561 aa8.85□□□□□ -0.99
Trim56-201ENSMUST00000054384 Notch2O35516 2470 aa8.85□□□□□ -0.99
Trim56-201ENSMUST00000054384 Lrrk2Q5S006 2527 aa8.85□□□□□ -0.99
Trim56-201ENSMUST00000054384 Ighv8-11A0A075B5X4 119 aa8.85□□□□□ -0.99
Trim56-201ENSMUST00000054384 1520401A03RikA0A0J9YVH6 598 aa8.85□□□□□ -0.99
Trim56-201ENSMUST00000054384 Wfdc12Q9JHY3 85 aa8.85□□□□□ -0.99
Trim56-201ENSMUST00000054384 Hivep2Q3UHF7 2430 aa8.85□□□□□ -0.99
Trim56-201ENSMUST00000054384 Col8a2P25318 699 aa8.85□□□□□ -0.99
Trim56-201ENSMUST00000054384 Pla2g2dQ9WVF6 144 aa8.84□□□□□ -0.99
Trim56-201ENSMUST00000054384 P01659 112 aa8.84□□□□□ -0.99
Trim56-201ENSMUST00000054384 Rpl28P41105 137 aaKnown RBP8.84□□□□□ -0.99
Trim56-201ENSMUST00000054384 Smim1P0C8K7 78 aa8.84□□□□□ -0.99
Trim56-201ENSMUST00000054384 Ighv3-3A0A0A6YWL2 116 aa8.83□□□□□ -1
Trim56-201ENSMUST00000054384 Zfyve26Q5DU37 2529 aa8.83□□□□□ -1
Trim56-201ENSMUST00000054384 Smrp1Q2MH31 260 aa8.83□□□□□ -1
Trim56-201ENSMUST00000054384 Ighv1-72P01751 139 aa8.83□□□□□ -1
Retrieved 100 of 22,080 RNA–protein pairs in 68.2 ms