RNA–Protein interactions for RNA: ENSMUST00000048274.10

Ttc39b-202, Transcript of Tetratricopeptide repeat protein 39B, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ttc39b, Length 1,804 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc39b-202ENSMUST00000048274 Lypd5Q9D7Z7 256 aa11.47□□□□□ -0.57
Ttc39b-202ENSMUST00000048274 Ly6hQ9WUC3 139 aa11.47□□□□□ -0.57
Ttc39b-202ENSMUST00000048274 Gm10542F6XDR3 90 aa11.46□□□□□ -0.57
Ttc39b-202ENSMUST00000048274 Gm10549Q3URY4 149 aa11.46□□□□□ -0.57
Ttc39b-202ENSMUST00000048274 SvipQ3UZP4 77 aa11.46□□□□□ -0.57
Ttc39b-202ENSMUST00000048274 Dmbt1Q60997 2085 aa11.46□□□□□ -0.57
Ttc39b-202ENSMUST00000048274 Xlr5cQ9JJR2 179 aa11.46□□□□□ -0.58
Ttc39b-202ENSMUST00000048274 Lage3Q9CR70 148 aa11.45□□□□□ -0.58
Ttc39b-202ENSMUST00000048274 SpinklQ8CEK3 90 aa11.44□□□□□ -0.58
Ttc39b-202ENSMUST00000048274 Gm7075D3Z497 112 aa11.44□□□□□ -0.58
Ttc39b-202ENSMUST00000048274 SbsponQ3UPR9 264 aa11.44□□□□□ -0.58
Ttc39b-202ENSMUST00000048274 Lst1O08843 95 aa11.43□□□□□ -0.58
Ttc39b-202ENSMUST00000048274 Ccl21aP84444 133 aa11.43□□□□□ -0.58
Ttc39b-202ENSMUST00000048274 Ccl21bP86792 133 aa11.43□□□□□ -0.58
Ttc39b-202ENSMUST00000048274 Ccl21cP86793 133 aa11.43□□□□□ -0.58
Ttc39b-202ENSMUST00000048274 Spink10Q8CAC8 162 aa11.43□□□□□ -0.58
Ttc39b-202ENSMUST00000048274 OtoglF7A4A7 2325 aa11.42□□□□□ -0.58
Ttc39b-202ENSMUST00000048274 Trav13n-1A0A0G2JEU8 110 aa11.42□□□□□ -0.58
Ttc39b-202ENSMUST00000048274 1700011M02RikB1AX35 88 aa11.42□□□□□ -0.58
Ttc39b-202ENSMUST00000048274 MalO09198 153 aa11.42□□□□□ -0.58
Ttc39b-202ENSMUST00000048274 P01729 129 aa11.42□□□□□ -0.58
Ttc39b-202ENSMUST00000048274 P01745 121 aa11.42□□□□□ -0.58
Ttc39b-202ENSMUST00000048274 LrbaQ9ESE1 2856 aa11.41□□□□□ -0.58
Ttc39b-202ENSMUST00000048274 Gm11020F6ZGD5 61 aa11.41□□□□□ -0.58
Ttc39b-202ENSMUST00000048274 Rpl28P41105 137 aaKnown RBP11.41□□□□□ -0.58
Ttc39b-202ENSMUST00000048274 Foxc1Q61572 553 aa11.41□□□□□ -0.58
Ttc39b-202ENSMUST00000048274 Csmd2V9GX34 3611 aa11.4□□□□□ -0.58
Ttc39b-202ENSMUST00000048274 PemtQ61907 199 aa11.4□□□□□ -0.58
Ttc39b-202ENSMUST00000048274 TeppQ6IMH0 216 aa11.4□□□□□ -0.58
Ttc39b-202ENSMUST00000048274 Cd164l2Q9D6W7 172 aa11.4□□□□□ -0.58
Ttc39b-202ENSMUST00000048274 Gm28539A0A087WSL9 92 aa11.39□□□□□ -0.59
Ttc39b-202ENSMUST00000048274 Gm10251J3QPM5 127 aa11.39□□□□□ -0.59
Ttc39b-202ENSMUST00000048274 Gm904Q3V2L5 102 aa11.39□□□□□ -0.59
Ttc39b-202ENSMUST00000048274 Tm2d2Q8R0I4 213 aa11.39□□□□□ -0.59
Ttc39b-202ENSMUST00000048274 Avpi1Q9D7H4 142 aa11.39□□□□□ -0.59
Ttc39b-202ENSMUST00000048274 Setd2E9Q5F9 2537 aa11.39□□□□□ -0.59
Ttc39b-202ENSMUST00000048274 Ighv2-9-1A0A075B697 116 aa11.39□□□□□ -0.59
Ttc39b-202ENSMUST00000048274 SelenowP63300 88 aa11.39□□□□□ -0.59
Ttc39b-202ENSMUST00000048274 Lyrm9Q3UN90 78 aa11.39□□□□□ -0.59
Ttc39b-202ENSMUST00000048274 Gm4861Q8C5A4 106 aa11.39□□□□□ -0.59
Ttc39b-202ENSMUST00000048274 Gm5089A1L3C8 106 aa11.38□□□□□ -0.59
Ttc39b-202ENSMUST00000048274 Gm10772F7AIG4 85 aa11.38□□□□□ -0.59
Ttc39b-202ENSMUST00000048274 Acyp1P56376 99 aa11.38□□□□□ -0.59
Ttc39b-202ENSMUST00000048274 Gm10735Q3US96 136 aa11.38□□□□□ -0.59
Ttc39b-202ENSMUST00000048274 MobpQ9D2P8 170 aa11.38□□□□□ -0.59
Ttc39b-202ENSMUST00000048274 Usp9xP70398 2559 aaKnown RBP11.38□□□□□ -0.59
Ttc39b-202ENSMUST00000048274 Gm43218A0A0G2JGT0 114 aa11.37□□□□□ -0.59
Ttc39b-202ENSMUST00000048274 GfyJ3KML8 504 aa11.37□□□□□ -0.59
Ttc39b-202ENSMUST00000048274 Ppp1r32Q148A4 427 aa11.37□□□□□ -0.59
Ttc39b-202ENSMUST00000048274 Gpha2Q925Q5 128 aa11.37□□□□□ -0.59
Ttc39b-202ENSMUST00000048274 PrlhG3UWC3 86 aa11.37□□□□□ -0.59
Ttc39b-202ENSMUST00000048274 Zfand2aQ9JII7 171 aa11.37□□□□□ -0.59
Ttc39b-202ENSMUST00000048274 Abca2P41234 2434 aa11.36□□□□□ -0.59
Ttc39b-202ENSMUST00000048274 LystP97412 3788 aa11.36□□□□□ -0.59
Ttc39b-202ENSMUST00000048274 Igkv4-72A0A0B4J1I4 117 aa11.36□□□□□ -0.59
Ttc39b-202ENSMUST00000048274 Gm7849D3YX03 116 aa11.36□□□□□ -0.59
Ttc39b-202ENSMUST00000048274 Vmo1Q5SXG7 201 aa11.36□□□□□ -0.59
Ttc39b-202ENSMUST00000048274 Defb50Q6TU36 73 aa11.36□□□□□ -0.59
Ttc39b-202ENSMUST00000048274 OtogO55225 2910 aa11.36□□□□□ -0.59
Ttc39b-202ENSMUST00000048274 Nhlrc1Q8BR37 401 aa11.35□□□□□ -0.59
Ttc39b-202ENSMUST00000048274 Nop10Q9CQS2 64 aa11.35□□□□□ -0.59
Ttc39b-202ENSMUST00000048274 Ss18l2Q9D174 77 aa11.35□□□□□ -0.59
Ttc39b-202ENSMUST00000048274 Atp5g1Q9CR84 136 aa11.34□□□□□ -0.59
Ttc39b-202ENSMUST00000048274 Trav11A0A0B4J1J9 114 aa11.33□□□□□ -0.6
Ttc39b-202ENSMUST00000048274 Gm9513B3GLJ6 99 aa11.33□□□□□ -0.6
Ttc39b-202ENSMUST00000048274 SmcpP15265 143 aa11.33□□□□□ -0.6
Ttc39b-202ENSMUST00000048274 5730596B20RikQ8BQ08 205 aa11.33□□□□□ -0.6
Ttc39b-202ENSMUST00000048274 Spink1P09036 80 aa11.32□□□□□ -0.6
Ttc39b-202ENSMUST00000048274 Psors1c2Q80ZC9 134 aa11.32□□□□□ -0.6
Ttc39b-202ENSMUST00000048274 Crlf1Q9JM58 425 aa11.32□□□□□ -0.6
Ttc39b-202ENSMUST00000048274 Igfn1Q3KNY0 2849 aa11.32□□□□□ -0.6
Ttc39b-202ENSMUST00000048274 Il19Q8CJ70 176 aa11.32□□□□□ -0.6
Ttc39b-202ENSMUST00000048274 Spata25Q9DA57 226 aa11.32□□□□□ -0.6
Ttc39b-202ENSMUST00000048274 Bahcc1Q3UHR0 2643 aa11.32□□□□□ -0.6
Ttc39b-202ENSMUST00000048274 Gm867A0A1W2P7T4 151 aa11.31□□□□□ -0.6
Ttc39b-202ENSMUST00000048274 Xcl1P47993 114 aa11.31□□□□□ -0.6
Ttc39b-202ENSMUST00000048274 Svep1A2AVA0 3567 aa11.31□□□□□ -0.6
Ttc39b-202ENSMUST00000048274 Cox6b1P56391 86 aaKnown RBP11.3□□□□□ -0.6
Ttc39b-202ENSMUST00000048274 Znf740Q6NZQ6 180 aa11.3□□□□□ -0.6
Ttc39b-202ENSMUST00000048274 Ndufa3Q9CQ91 84 aa11.3□□□□□ -0.6
Ttc39b-202ENSMUST00000048274 Trav14d-3-dv8A0A075B619 120 aa11.3□□□□□ -0.6
Ttc39b-202ENSMUST00000048274 Trav9d-4A0A0G2JG37 103 aa11.3□□□□□ -0.6
Ttc39b-202ENSMUST00000048274 Pglyrp4Q0VB07 374 aa11.3□□□□□ -0.6
Ttc39b-202ENSMUST00000048274 RetnQ99P87 114 aa11.3□□□□□ -0.6
Ttc39b-202ENSMUST00000048274 4930524J08RikQ9CUJ5 163 aa11.3□□□□□ -0.6
Ttc39b-202ENSMUST00000048274 Spry2Q9QXV8 315 aa11.3□□□□□ -0.6
Ttc39b-202ENSMUST00000048274 Spink4O35679 86 aa11.29□□□□□ -0.6
Ttc39b-202ENSMUST00000048274 Trav9d-3A0A075B695 113 aa11.28□□□□□ -0.6
Ttc39b-202ENSMUST00000048274 Ighv1-56A0A0A6YXG2 117 aa11.28□□□□□ -0.6
Ttc39b-202ENSMUST00000048274 Sprr1bQ62267 153 aa11.28□□□□□ -0.6
Ttc39b-202ENSMUST00000048274 BB014433Q8C5R5 389 aa11.28□□□□□ -0.6
Ttc39b-202ENSMUST00000048274 Gm10300Q8C8P7 189 aa11.28□□□□□ -0.6
Ttc39b-202ENSMUST00000048274 Zfp951A0A087WRH0 451 aa11.28□□□□□ -0.6
Ttc39b-202ENSMUST00000048274 Trav13-4-dv7A0A075B6C2 110 aa11.27□□□□□ -0.61
Ttc39b-202ENSMUST00000048274 Ighv1-49A0A0A6YWX2 117 aa11.27□□□□□ -0.61
Ttc39b-202ENSMUST00000048274 Krtap16-1A2A5X5 502 aa11.27□□□□□ -0.61
Ttc39b-202ENSMUST00000048274 Esm1Q9QYY7 184 aa11.27□□□□□ -0.61
Ttc39b-202ENSMUST00000048274 FlncQ8VHX6 2726 aaKnown RBP11.27□□□□□ -0.61
Ttc39b-202ENSMUST00000048274 Arid1bE9Q4N7 2244 aa11.27□□□□□ -0.61
Ttc39b-202ENSMUST00000048274 Igkv1-117A0A140T8M0 119 aa11.26□□□□□ -0.61
Retrieved 100 of 22,080 RNA–protein pairs in 65 ms