RNA–Protein interactions for RNA: ENSMUST00000028280.13

Col5a1-201, Transcript of Collagen alpha-1(V) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col5a1, Length 8,406 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1-201ENSMUST00000028280 BtcQ05928 177 aa10.58□□□□□ -0.72
Col5a1-201ENSMUST00000028280 Ighv12-3A0A075B5T1 117 aa10.57□□□□□ -0.72
Col5a1-201ENSMUST00000028280 Rbx1P62878 108 aa10.57□□□□□ -0.72
Col5a1-201ENSMUST00000028280 Defb18Q30KP5 85 aa10.57□□□□□ -0.72
Col5a1-201ENSMUST00000028280 Ndufa4l2Q4FZG9 87 aa10.57□□□□□ -0.72
Col5a1-201ENSMUST00000028280 Myo9aQ8C170 2542 aa10.57□□□□□ -0.72
Col5a1-201ENSMUST00000028280 Defb40Q70KL2 73 aa10.57□□□□□ -0.72
Col5a1-201ENSMUST00000028280 IgipA0A1B0GR74 53 aa10.57□□□□□ -0.72
Col5a1-201ENSMUST00000028280 U90926O08546 118 aa10.57□□□□□ -0.72
Col5a1-201ENSMUST00000028280 P01643 108 aa10.56□□□□□ -0.72
Col5a1-201ENSMUST00000028280 4930564D02RikQ9D4S4 103 aa10.56□□□□□ -0.72
Col5a1-201ENSMUST00000028280 Dkk4Q8VEJ3 221 aa10.56□□□□□ -0.72
Col5a1-201ENSMUST00000028280 ScxQ64124 207 aa10.55□□□□□ -0.72
Col5a1-201ENSMUST00000028280 E030018B13RikJ3QMS9 113 aa10.55□□□□□ -0.72
Col5a1-201ENSMUST00000028280 Crip1P63254 77 aa10.55□□□□□ -0.72
Col5a1-201ENSMUST00000028280 Gm5468Q8C3D3 155 aa10.55□□□□□ -0.72
Col5a1-201ENSMUST00000028280 2010109I03RikQ9CQ11 111 aa10.55□□□□□ -0.72
Col5a1-201ENSMUST00000028280 Odf3l1Q810P2 275 aa10.54□□□□□ -0.72
Col5a1-201ENSMUST00000028280 Ly6gP35461 111 aa10.54□□□□□ -0.72
Col5a1-201ENSMUST00000028280 Ighv8-11A0A075B5X4 119 aa10.54□□□□□ -0.72
Col5a1-201ENSMUST00000028280 A830031A19RikQ8BNT5 113 aa10.53□□□□□ -0.72
Col5a1-201ENSMUST00000028280 CtrlQ9ER05 264 aa10.53□□□□□ -0.72
Col5a1-201ENSMUST00000028280 P04944 107 aa10.53□□□□□ -0.72
Col5a1-201ENSMUST00000028280 A230072I06RikQ3UUJ8 172 aa10.53□□□□□ -0.72
Col5a1-201ENSMUST00000028280 PlaurP35456 327 aa10.53□□□□□ -0.72
Col5a1-201ENSMUST00000028280 Hivep2Q3UHF7 2430 aa10.53□□□□□ -0.72
Col5a1-201ENSMUST00000028280 Gm9949Q8C9F4 104 aa10.52□□□□□ -0.72
Col5a1-201ENSMUST00000028280 Cd27P41272 250 aa10.52□□□□□ -0.73
Col5a1-201ENSMUST00000028280 PscaP57096 123 aa10.52□□□□□ -0.73
Col5a1-201ENSMUST00000028280 Gm5629P06327 117 aa10.52□□□□□ -0.73
Col5a1-201ENSMUST00000028280 Zfp462B1AWL2 2495 aaKnown RBP10.52□□□□□ -0.73
Col5a1-201ENSMUST00000028280 Wfdc6bF6ULY1 148 aa10.51□□□□□ -0.73
Col5a1-201ENSMUST00000028280 Fam19a5Q91WE9 132 aa10.51□□□□□ -0.73
Col5a1-201ENSMUST00000028280 Obox2E9PXV9 151 aa10.51□□□□□ -0.73
Col5a1-201ENSMUST00000028280 P18527 97 aa10.51□□□□□ -0.73
Col5a1-201ENSMUST00000028280 Odf3Q920N1 254 aa10.51□□□□□ -0.73
Col5a1-201ENSMUST00000028280 Spry2Q9QXV8 315 aa10.51□□□□□ -0.73
Col5a1-201ENSMUST00000028280 Flg2Q2VIS4 2362 aa10.5□□□□□ -0.73
Col5a1-201ENSMUST00000028280 Rnase1P00683 149 aa10.5□□□□□ -0.73
Col5a1-201ENSMUST00000028280 1520401A03RikA0A0J9YVH6 598 aa10.49□□□□□ -0.73
Col5a1-201ENSMUST00000028280 P01747 120 aa10.49□□□□□ -0.73
Col5a1-201ENSMUST00000028280 Gm5878E9PUB3 99 aa10.49□□□□□ -0.73
Col5a1-201ENSMUST00000028280 Gm21060J3KMU4 56 aa10.49□□□□□ -0.73
Col5a1-201ENSMUST00000028280 P01674 108 aa10.49□□□□□ -0.73
Col5a1-201ENSMUST00000028280 Wfdc15aQ8BH89 80 aa10.49□□□□□ -0.73
Col5a1-201ENSMUST00000028280 Ighv1-75A0A075B5Y2 117 aa10.48□□□□□ -0.73
Col5a1-201ENSMUST00000028280 Znf706Q9D115 76 aaKnown RBP10.48□□□□□ -0.73
Col5a1-201ENSMUST00000028280 9130230L23RikQ8CC80 163 aa10.48□□□□□ -0.73
Col5a1-201ENSMUST00000028280 Nsun4C4P6S0 806 aaKnown RBP10.47□□□□□ -0.73
Col5a1-201ENSMUST00000028280 Gm10267M0QWD8 85 aa10.47□□□□□ -0.73
Col5a1-201ENSMUST00000028280 Ighv2-6-8A0A0A6YWY9 116 aa10.47□□□□□ -0.73
Col5a1-201ENSMUST00000028280 Ube2d2P62838 147 aa10.47□□□□□ -0.73
Col5a1-201ENSMUST00000028280 Notch2O35516 2470 aa10.47□□□□□ -0.73
Col5a1-201ENSMUST00000028280 Ighv1-5A0A0A6YWG2 117 aa10.46□□□□□ -0.73
Col5a1-201ENSMUST00000028280 Gm10647E9Q8X0 124 aa10.46□□□□□ -0.73
Col5a1-201ENSMUST00000028280 Tcte2E9PY37 120 aa10.46□□□□□ -0.73
Col5a1-201ENSMUST00000028280 Cox8cA6H666 72 aa10.46□□□□□ -0.73
Col5a1-201ENSMUST00000028280 Gm12057A0A087WR21 115 aa10.46□□□□□ -0.74
Col5a1-201ENSMUST00000028280 Igkv8-28A0A0G2JE47 121 aa10.46□□□□□ -0.74
Col5a1-201ENSMUST00000028280 CstadQ9D245 104 aa10.46□□□□□ -0.74
Col5a1-201ENSMUST00000028280 Ighv1-63A0A075B5X2 117 aa10.45□□□□□ -0.74
Col5a1-201ENSMUST00000028280 FcorP0DJI6 106 aa10.45□□□□□ -0.74
Col5a1-201ENSMUST00000028280 Zfand3Q497H0 227 aa10.45□□□□□ -0.74
Col5a1-201ENSMUST00000028280 Ube2d1P61080 147 aaKnown RBP10.45□□□□□ -0.74
Col5a1-201ENSMUST00000028280 Col5a1O88207 1838 aa10.45□□□□□ -0.74
Col5a1-201ENSMUST00000028280 Gm8439G3UWA7 96 aa10.45□□□□□ -0.74
Col5a1-201ENSMUST00000028280 Gm9958Q8C9U4 106 aa10.45□□□□□ -0.74
Col5a1-201ENSMUST00000028280 Ube2d3P61079 147 aa10.45□□□□□ -0.74
Col5a1-201ENSMUST00000028280 Gm6899Q3USS0 134 aa10.45□□□□□ -0.74
Col5a1-201ENSMUST00000028280 Col4a6B1AVK5 1691 aa10.44□□□□□ -0.74
Col5a1-201ENSMUST00000028280 Map6d1Q14BB9 191 aa10.44□□□□□ -0.74
Col5a1-201ENSMUST00000028280 TeppQ6IMH0 216 aa10.44□□□□□ -0.74
Col5a1-201ENSMUST00000028280 Gm9913Q8BQQ2 135 aa10.44□□□□□ -0.74
Col5a1-201ENSMUST00000028280 Gm11011D3Z3L9 86 aa10.43□□□□□ -0.74
Col5a1-201ENSMUST00000028280 Gm10577Q3UDV9 132 aa10.42□□□□□ -0.74
Col5a1-201ENSMUST00000028280 Defb38Q7TNV7 63 aa10.42□□□□□ -0.74
Col5a1-201ENSMUST00000028280 Wfdc13Q5DQQ6 81 aa10.41□□□□□ -0.74
Col5a1-201ENSMUST00000028280 Gm20708H3BKF4 155 aa10.41□□□□□ -0.74
Col5a1-201ENSMUST00000028280 Lrrk2Q5S006 2527 aa10.41□□□□□ -0.74
Col5a1-201ENSMUST00000028280 MsmpB1AWI6 139 aa10.41□□□□□ -0.74
Col5a1-201ENSMUST00000028280 P01728 117 aa10.4□□□□□ -0.75
Col5a1-201ENSMUST00000028280 P01823 113 aa10.39□□□□□ -0.75
Col5a1-201ENSMUST00000028280 Ovol3D3YYM0 189 aa10.39□□□□□ -0.75
Col5a1-201ENSMUST00000028280 Q9D8Q6 235 aa10.39□□□□□ -0.75
Col5a1-201ENSMUST00000028280 P01820 115 aa10.39□□□□□ -0.75
Col5a1-201ENSMUST00000028280 Smim1P0C8K7 78 aa10.38□□□□□ -0.75
Col5a1-201ENSMUST00000028280 Wfdc3Q14AE4 130 aa10.38□□□□□ -0.75
Col5a1-201ENSMUST00000028280 Wfdc12Q9JHY3 85 aa10.38□□□□□ -0.75
Col5a1-201ENSMUST00000028280 Trbv13-2A0A140T8N6 113 aa10.38□□□□□ -0.75
Col5a1-201ENSMUST00000028280 C130032M10RikQ8C888 123 aa10.38□□□□□ -0.75
Col5a1-201ENSMUST00000028280 UqcrqQ9CQ69 82 aa10.38□□□□□ -0.75
Col5a1-201ENSMUST00000028280 Sprr3O09116 238 aa10.37□□□□□ -0.75
Col5a1-201ENSMUST00000028280 SycnQ8VCK7 134 aa10.37□□□□□ -0.75
Col5a1-201ENSMUST00000028280 Fgfbp3Q1HCM0 245 aa10.37□□□□□ -0.75
Col5a1-201ENSMUST00000028280 LhbO09108 141 aa10.36□□□□□ -0.75
Col5a1-201ENSMUST00000028280 Rnf185Q91YT2 192 aa10.36□□□□□ -0.75
Col5a1-201ENSMUST00000028280 Spry4Q9WTP2 300 aa10.35□□□□□ -0.75
Col5a1-201ENSMUST00000028280 Q9CX25 107 aa10.35□□□□□ -0.75
Col5a1-201ENSMUST00000028280 Sprr2jO70561 109 aa10.34□□□□□ -0.75
Col5a1-201ENSMUST00000028280 CrygeQ03740 174 aa10.34□□□□□ -0.75
Retrieved 100 of 22,080 RNA–protein pairs in 48.6 ms