RNA–Protein interactions for RNA: ENSMUST00000026008.7

Trim8-201, Transcript of Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim8, Length 3,230 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8-201ENSMUST00000026008 March3Q8BRX9 218 aa11.77□□□□□ -0.52
Trim8-201ENSMUST00000026008 P01823 113 aa11.77□□□□□ -0.53
Trim8-201ENSMUST00000026008 H1fxQ80ZM5 188 aa11.77□□□□□ -0.53
Trim8-201ENSMUST00000026008 Gm10251J3QPM5 127 aa11.76□□□□□ -0.53
Trim8-201ENSMUST00000026008 P01729 129 aa11.76□□□□□ -0.53
Trim8-201ENSMUST00000026008 Gm7075D3Z497 112 aa11.75□□□□□ -0.53
Trim8-201ENSMUST00000026008 Gm8439G3UWA7 96 aa11.75□□□□□ -0.53
Trim8-201ENSMUST00000026008 Znf740Q6NZQ6 180 aa11.75□□□□□ -0.53
Trim8-201ENSMUST00000026008 SpinklQ8CEK3 90 aa11.75□□□□□ -0.53
Trim8-201ENSMUST00000026008 Ube2wQ8VDW4 151 aa11.75□□□□□ -0.53
Trim8-201ENSMUST00000026008 BsnO88737 3942 aa11.75□□□□□ -0.53
Trim8-201ENSMUST00000026008 Igkv4-79A0A075B5L8 119 aa11.75□□□□□ -0.53
Trim8-201ENSMUST00000026008 Rnase1P00683 149 aa11.75□□□□□ -0.53
Trim8-201ENSMUST00000026008 4930432M17RikQ3V0W9 174 aa11.75□□□□□ -0.53
Trim8-201ENSMUST00000026008 CenpwQ3URR0 86 aa11.74□□□□□ -0.53
Trim8-201ENSMUST00000026008 Gm10300Q8C8P7 189 aa11.74□□□□□ -0.53
Trim8-201ENSMUST00000026008 Akap13E9Q394 2776 aa11.74□□□□□ -0.53
Trim8-201ENSMUST00000026008 Defb2P82020 71 aa11.74□□□□□ -0.53
Trim8-201ENSMUST00000026008 Gm7257D3YX25 99 aa11.73□□□□□ -0.53
Trim8-201ENSMUST00000026008 Shisa2Q8QZV2 295 aa11.73□□□□□ -0.53
Trim8-201ENSMUST00000026008 Gm10322F7D7I4 111 aa11.73□□□□□ -0.53
Trim8-201ENSMUST00000026008 Spink10Q8CAC8 162 aa11.73□□□□□ -0.53
Trim8-201ENSMUST00000026008 Hivep3A2A884 2348 aa11.73□□□□□ -0.53
Trim8-201ENSMUST00000026008 CirbpP60824 172 aaKnown RBP11.73□□□□□ -0.53
Trim8-201ENSMUST00000026008 Q99M08 65 aa11.73□□□□□ -0.53
Trim8-201ENSMUST00000026008 Nop10Q9CQS2 64 aa11.73□□□□□ -0.53
Trim8-201ENSMUST00000026008 Trav9d-3A0A075B695 113 aa11.72□□□□□ -0.53
Trim8-201ENSMUST00000026008 Cox6cQ9CPQ1 76 aa11.72□□□□□ -0.53
Trim8-201ENSMUST00000026008 Atp5g1Q9CR84 136 aa11.72□□□□□ -0.53
Trim8-201ENSMUST00000026008 Ly6hQ9WUC3 139 aa11.72□□□□□ -0.53
Trim8-201ENSMUST00000026008 4930544G11RikQ9CR99 193 aa11.71□□□□□ -0.53
Trim8-201ENSMUST00000026008 4930442H23RikQ9D5G7 103 aa11.71□□□□□ -0.53
Trim8-201ENSMUST00000026008 Phpt1Q9DAK9 124 aa11.71□□□□□ -0.53
Trim8-201ENSMUST00000026008 Rpl36aP83882 106 aaKnown RBP11.71□□□□□ -0.53
Trim8-201ENSMUST00000026008 Defb26Q30KN7 186 aa11.71□□□□□ -0.54
Trim8-201ENSMUST00000026008 Wdr38Q9D994 303 aa11.71□□□□□ -0.54
Trim8-201ENSMUST00000026008 Smrp1Q2MH31 260 aa11.7□□□□□ -0.54
Trim8-201ENSMUST00000026008 Rpl35aO55142 110 aa11.7□□□□□ -0.54
Trim8-201ENSMUST00000026008 NipblQ6KCD5 2798 aaKnown RBP11.7□□□□□ -0.54
Trim8-201ENSMUST00000026008 Crlf1Q9JM58 425 aa11.69□□□□□ -0.54
Trim8-201ENSMUST00000026008 Gm17472A0A075B683 117 aa11.68□□□□□ -0.54
Trim8-201ENSMUST00000026008 Timm17bQ9Z0V7 172 aa11.68□□□□□ -0.54
Trim8-201ENSMUST00000026008 Trav13-4-dv7A0A075B6C2 110 aa11.68□□□□□ -0.54
Trim8-201ENSMUST00000026008 Trav4-3A0A0B4J1K1 110 aa11.68□□□□□ -0.54
Trim8-201ENSMUST00000026008 Trav9d-4A0A0G2JG37 103 aa11.68□□□□□ -0.54
Trim8-201ENSMUST00000026008 Gatd1Q8BFQ8 220 aa11.68□□□□□ -0.54
Trim8-201ENSMUST00000026008 Sostdc1Q9CQN4 206 aa11.68□□□□□ -0.54
Trim8-201ENSMUST00000026008 Trav4d-3A0A075B625 110 aa11.67□□□□□ -0.54
Trim8-201ENSMUST00000026008 P01745 121 aa11.67□□□□□ -0.54
Trim8-201ENSMUST00000026008 Ighv1-62-1A0A075B5U3 116 aa11.67□□□□□ -0.54
Trim8-201ENSMUST00000026008 Sh2d1aO88890 126 aa11.67□□□□□ -0.54
Trim8-201ENSMUST00000026008 Morn3Q8C5T4 241 aa11.67□□□□□ -0.54
Trim8-201ENSMUST00000026008 Smlr1J3QMJ4 66 aa11.66□□□□□ -0.54
Trim8-201ENSMUST00000026008 Defb42Q8BVB5 75 aa11.66□□□□□ -0.54
Trim8-201ENSMUST00000026008 Xlr5cQ9JJR2 179 aa11.66□□□□□ -0.54
Trim8-201ENSMUST00000026008 Spry2Q9QXV8 315 aa11.66□□□□□ -0.54
Trim8-201ENSMUST00000026008 Gm3250E9Q1M3 230 aa11.66□□□□□ -0.54
Trim8-201ENSMUST00000026008 Prr13Q9CQJ5 137 aa11.65□□□□□ -0.54
Trim8-201ENSMUST00000026008 MrapQ9D159 127 aa11.65□□□□□ -0.54
Trim8-201ENSMUST00000026008 1700010B08RikQ9DAI7 102 aa11.65□□□□□ -0.54
Trim8-201ENSMUST00000026008 Smim20D3Z7Q2 69 aa11.65□□□□□ -0.54
Trim8-201ENSMUST00000026008 Lypd5Q9D7Z7 256 aa11.65□□□□□ -0.54
Trim8-201ENSMUST00000026008 Ighv1-49A0A0A6YWX2 117 aa11.64□□□□□ -0.55
Trim8-201ENSMUST00000026008 Plac8l1Q08EJ0 177 aa11.64□□□□□ -0.55
Trim8-201ENSMUST00000026008 Pfn2Q9JJV2 140 aa11.64□□□□□ -0.55
Trim8-201ENSMUST00000026008 Cox7a1P56392 80 aa11.64□□□□□ -0.55
Trim8-201ENSMUST00000026008 CdsnQ7TPC1 561 aa11.64□□□□□ -0.55
Trim8-201ENSMUST00000026008 Cdc42se2Q8BGH7 84 aa11.64□□□□□ -0.55
Trim8-201ENSMUST00000026008 SelenowP63300 88 aa11.63□□□□□ -0.55
Trim8-201ENSMUST00000026008 Lst1O08843 95 aa11.63□□□□□ -0.55
Trim8-201ENSMUST00000026008 Cd164l2Q9D6W7 172 aa11.63□□□□□ -0.55
Trim8-201ENSMUST00000026008 1700011M02RikB1AX35 88 aa11.62□□□□□ -0.55
Trim8-201ENSMUST00000026008 Eif4ebp1Q60876 117 aa11.62□□□□□ -0.55
Trim8-201ENSMUST00000026008 Pglyrp4Q0VB07 374 aa11.62□□□□□ -0.55
Trim8-201ENSMUST00000026008 Tfpi2O35536 230 aa11.61□□□□□ -0.55
Trim8-201ENSMUST00000026008 Gm9922Q8C3P1 144 aa11.61□□□□□ -0.55
Trim8-201ENSMUST00000026008 Bles03Q8VD62 251 aa11.6□□□□□ -0.55
Trim8-201ENSMUST00000026008 Ndufa3Q9CQ91 84 aa11.6□□□□□ -0.55
Trim8-201ENSMUST00000026008 Trav11A0A0B4J1J9 114 aa11.6□□□□□ -0.55
Trim8-201ENSMUST00000026008 Fxyd5P97808 178 aa11.59□□□□□ -0.55
Trim8-201ENSMUST00000026008 TeppQ6IMH0 216 aa11.59□□□□□ -0.55
Trim8-201ENSMUST00000026008 Ank2Q8C8R3 3898 aa11.59□□□□□ -0.55
Trim8-201ENSMUST00000026008 Tomm7Q9D173 55 aa11.59□□□□□ -0.55
Trim8-201ENSMUST00000026008 Ighv1-61P01749 117 aa11.58□□□□□ -0.56
Trim8-201ENSMUST00000026008 Foxc1Q61572 553 aa11.58□□□□□ -0.56
Trim8-201ENSMUST00000026008 Spata25Q9DA57 226 aa11.58□□□□□ -0.56
Trim8-201ENSMUST00000026008 B230359F08RikA0A0B4J1K3 109 aa11.58□□□□□ -0.56
Trim8-201ENSMUST00000026008 Rnf152Q8BG47 203 aa11.58□□□□□ -0.56
Trim8-201ENSMUST00000026008 Gm867A0A1W2P7T4 151 aa11.57□□□□□ -0.56
Trim8-201ENSMUST00000026008 MalO09198 153 aa11.57□□□□□ -0.56
Trim8-201ENSMUST00000026008 Gm10647E9Q8X0 124 aa11.57□□□□□ -0.56
Trim8-201ENSMUST00000026008 Trav13d-4A0A0G2JFX3 110 aa11.56□□□□□ -0.56
Trim8-201ENSMUST00000026008 Defb29Q8BGW9 78 aa11.56□□□□□ -0.56
Trim8-201ENSMUST00000026008 Hspg2Q05793 3707 aaKnown RBP11.56□□□□□ -0.56
Trim8-201ENSMUST00000026008 PemtQ61907 199 aa11.56□□□□□ -0.56
Trim8-201ENSMUST00000026008 CrygaP04345 174 aa11.55□□□□□ -0.56
Trim8-201ENSMUST00000026008 Igkv1-35A0A0G2JDE5 120 aa11.55□□□□□ -0.56
Trim8-201ENSMUST00000026008 Defa1P11477 93 aa11.55□□□□□ -0.56
Trim8-201ENSMUST00000026008 4930546C10RikE9Q4Y3 121 aa11.54□□□□□ -0.56
Trim8-201ENSMUST00000026008 P01755 137 aa11.54□□□□□ -0.56
Retrieved 100 of 22,080 RNA–protein pairs in 95.1 ms