RNA–Protein interactions for RNA: ENSMUST00000201711.3

Pdgfra-205, Transcript of Platelet-derived growth factor receptor alpha, mousemouse

TSL 1 (best) BASIC

Gene Pdgfra, Length 4,088 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdgfra-205ENSMUST00000201711 PrlhG3UWC3 86 aa9.85□□□□□ -0.83
Pdgfra-205ENSMUST00000201711 Gm10295Q8CCF3 114 aa9.85□□□□□ -0.83
Pdgfra-205ENSMUST00000201711 Cryba4Q9JJV0 196 aa9.85□□□□□ -0.83
Pdgfra-205ENSMUST00000201711 Socs3O35718 225 aa9.85□□□□□ -0.83
Pdgfra-205ENSMUST00000201711 Gm5629P06327 117 aa9.85□□□□□ -0.83
Pdgfra-205ENSMUST00000201711 Rpl32-psP17932 135 aa9.85□□□□□ -0.83
Pdgfra-205ENSMUST00000201711 Znf740Q6NZQ6 180 aa9.85□□□□□ -0.83
Pdgfra-205ENSMUST00000201711 CnfnQ6PCW6 111 aa9.85□□□□□ -0.83
Pdgfra-205ENSMUST00000201711 Ang3P97802 145 aa9.84□□□□□ -0.83
Pdgfra-205ENSMUST00000201711 Vmo1Q5SXG7 201 aa9.84□□□□□ -0.83
Pdgfra-205ENSMUST00000201711 Utp20Q5XG71 2788 aaKnown RBP9.84□□□□□ -0.83
Pdgfra-205ENSMUST00000201711 Akap13E9Q394 2776 aa9.84□□□□□ -0.83
Pdgfra-205ENSMUST00000201711 Fhl2O70433 279 aa9.83□□□□□ -0.84
Pdgfra-205ENSMUST00000201711 Trbv16A0A0B4J1H3 115 aa9.83□□□□□ -0.84
Pdgfra-205ENSMUST00000201711 Vwc2lQ505H4 222 aa9.83□□□□□ -0.84
Pdgfra-205ENSMUST00000201711 Atp6v0e2Q91XE7 81 aa9.83□□□□□ -0.84
Pdgfra-205ENSMUST00000201711 Gm3250E9Q1M3 230 aa9.83□□□□□ -0.84
Pdgfra-205ENSMUST00000201711 4930415O20RikQ8CDT5 131 aa9.82□□□□□ -0.84
Pdgfra-205ENSMUST00000201711 Trav9d-4A0A0G2JG37 103 aa9.82□□□□□ -0.84
Pdgfra-205ENSMUST00000201711 Gm10542F6XDR3 90 aa9.82□□□□□ -0.84
Pdgfra-205ENSMUST00000201711 Defb47Q30KN1 79 aa9.82□□□□□ -0.84
Pdgfra-205ENSMUST00000201711 Tep1P97499 2629 aa9.82□□□□□ -0.84
Pdgfra-205ENSMUST00000201711 Sh2d1aO88890 126 aa9.82□□□□□ -0.84
Pdgfra-205ENSMUST00000201711 Clec5aQ9R007 190 aa9.82□□□□□ -0.84
Pdgfra-205ENSMUST00000201711 Ighv1-75A0A075B5Y2 117 aa9.82□□□□□ -0.84
Pdgfra-205ENSMUST00000201711 FcorP0DJI6 106 aa9.82□□□□□ -0.84
Pdgfra-205ENSMUST00000201711 Q8R092 253 aa9.82□□□□□ -0.84
Pdgfra-205ENSMUST00000201711 Mrpl35Q9CQL6 188 aa9.82□□□□□ -0.84
Pdgfra-205ENSMUST00000201711 Crlf1Q9JM58 425 aa9.82□□□□□ -0.84
Pdgfra-205ENSMUST00000201711 Trav13n-1A0A0G2JEU8 110 aa9.81□□□□□ -0.84
Pdgfra-205ENSMUST00000201711 A530064D06RikQ8BNV8 229 aa9.81□□□□□ -0.84
Pdgfra-205ENSMUST00000201711 Klk5Q9D140 293 aa9.81□□□□□ -0.84
Pdgfra-205ENSMUST00000201711 Fn1P11276 2477 aaKnown RBP9.81□□□□□ -0.84
Pdgfra-205ENSMUST00000201711 Zfhx4Q9JJN2 3550 aa9.81□□□□□ -0.84
Pdgfra-205ENSMUST00000201711 FasnP19096 2504 aaKnown RBP9.81□□□□□ -0.84
Pdgfra-205ENSMUST00000201711 Chd9Q8BYH8 2885 aa9.81□□□□□ -0.84
Pdgfra-205ENSMUST00000201711 Igfn1Q3KNY0 2849 aa9.8□□□□□ -0.84
Pdgfra-205ENSMUST00000201711 Defa1P11477 93 aa9.8□□□□□ -0.84
Pdgfra-205ENSMUST00000201711 Cops9Q3U898 57 aa9.8□□□□□ -0.84
Pdgfra-205ENSMUST00000201711 Smim1P0C8K7 78 aa9.79□□□□□ -0.84
Pdgfra-205ENSMUST00000201711 Tspan13Q9D8C2 204 aa9.79□□□□□ -0.84
Pdgfra-205ENSMUST00000201711 Triap1Q9D8Z2 76 aa9.79□□□□□ -0.84
Pdgfra-205ENSMUST00000201711 Chd6A3KFM7 2711 aa9.79□□□□□ -0.84
Pdgfra-205ENSMUST00000201711 SpinklQ8CEK3 90 aa9.79□□□□□ -0.84
Pdgfra-205ENSMUST00000201711 Sslp1Q3UN54 99 aa9.79□□□□□ -0.84
Pdgfra-205ENSMUST00000201711 Crip3Q6Q6R3 243 aa9.79□□□□□ -0.84
Pdgfra-205ENSMUST00000201711 BC048562Q80ZQ7 204 aa9.79□□□□□ -0.84
Pdgfra-205ENSMUST00000201711 Stab1Q8R4Y4 2571 aa9.79□□□□□ -0.84
Pdgfra-205ENSMUST00000201711 Ighv8-12A0A0G2JDE1 119 aa9.78□□□□□ -0.84
Pdgfra-205ENSMUST00000201711 Q99M08 65 aa9.78□□□□□ -0.84
Pdgfra-205ENSMUST00000201711 Lelp1Q9DAE3 120 aa9.78□□□□□ -0.84
Pdgfra-205ENSMUST00000201711 Gm10767Q3TQP0 103 aa9.78□□□□□ -0.84
Pdgfra-205ENSMUST00000201711 Cfap126Q6P8X9 189 aa9.78□□□□□ -0.84
Pdgfra-205ENSMUST00000201711 Timm17aQ9Z0V8 171 aa9.78□□□□□ -0.84
Pdgfra-205ENSMUST00000201711 LeprotO89013 131 aa9.78□□□□□ -0.84
Pdgfra-205ENSMUST00000201711 Defa4P28311 92 aa9.78□□□□□ -0.84
Pdgfra-205ENSMUST00000201711 Gm10490F6VBM2 120 aa9.77□□□□□ -0.85
Pdgfra-205ENSMUST00000201711 D130052B06RikQ3UW13 202 aa9.77□□□□□ -0.85
Pdgfra-205ENSMUST00000201711 Mast4Q811L6 2618 aa9.77□□□□□ -0.85
Pdgfra-205ENSMUST00000201711 Dad1P61804 113 aa9.77□□□□□ -0.85
Pdgfra-205ENSMUST00000201711 Ube2wQ8VDW4 151 aa9.77□□□□□ -0.85
Pdgfra-205ENSMUST00000201711 Csmd1Q923L3 3564 aa9.77□□□□□ -0.85
Pdgfra-205ENSMUST00000201711 FshbQ60687 130 aa9.76□□□□□ -0.85
Pdgfra-205ENSMUST00000201711 Smg1Q8BKX6 3658 aaKnown RBP9.76□□□□□ -0.85
Pdgfra-205ENSMUST00000201711 Ighv1-66A0A075B5X5 117 aa9.75□□□□□ -0.85
Pdgfra-205ENSMUST00000201711 Q9D8Q6 235 aa9.75□□□□□ -0.85
Pdgfra-205ENSMUST00000201711 Ighv3-3A0A0A6YWL2 116 aa9.75□□□□□ -0.85
Pdgfra-205ENSMUST00000201711 Psmb8P28063 276 aa9.75□□□□□ -0.85
Pdgfra-205ENSMUST00000201711 A930009A15RikG3UYI6 118 aa9.74□□□□□ -0.85
Pdgfra-205ENSMUST00000201711 Ighv1-72P01751 139 aa9.74□□□□□ -0.85
Pdgfra-205ENSMUST00000201711 Defb29Q8BGW9 78 aa9.74□□□□□ -0.85
Pdgfra-205ENSMUST00000201711 Morn3Q8C5T4 241 aa9.74□□□□□ -0.85
Pdgfra-205ENSMUST00000201711 Igkv4-62A0A0G2JDW9 117 aa9.74□□□□□ -0.85
Pdgfra-205ENSMUST00000201711 Pglyrp1O88593 182 aa9.74□□□□□ -0.85
Pdgfra-205ENSMUST00000201711 Cfc1P97766 202 aa9.74□□□□□ -0.85
Pdgfra-205ENSMUST00000201711 Ifitm1Q9D103 106 aa9.74□□□□□ -0.85
Pdgfra-205ENSMUST00000201711 Lyrm9Q3UN90 78 aa9.74□□□□□ -0.85
Pdgfra-205ENSMUST00000201711 Zc2hc1bQ9D534 172 aa9.73□□□□□ -0.85
Pdgfra-205ENSMUST00000201711 Trav13-4-dv7A0A075B6C2 110 aa9.73□□□□□ -0.85
Pdgfra-205ENSMUST00000201711 Gm8439G3UWA7 96 aa9.73□□□□□ -0.85
Pdgfra-205ENSMUST00000201711 Cox17P56394 63 aa9.73□□□□□ -0.85
Pdgfra-205ENSMUST00000201711 Polr2kQ63871 58 aa9.73□□□□□ -0.85
Pdgfra-205ENSMUST00000201711 Igkv3-1A0A075B5P1 119 aa9.72□□□□□ -0.85
Pdgfra-205ENSMUST00000201711 Defa2P28309 93 aa9.72□□□□□ -0.85
Pdgfra-205ENSMUST00000201711 Ighv8-5A0A0A6YY60 119 aa9.72□□□□□ -0.85
Pdgfra-205ENSMUST00000201711 Tmem86bQ497J1 226 aa9.72□□□□□ -0.85
Pdgfra-205ENSMUST00000201711 March3Q8BRX9 218 aa9.72□□□□□ -0.85
Pdgfra-205ENSMUST00000201711 Lgals4Q8K419 326 aa9.72□□□□□ -0.85
Pdgfra-205ENSMUST00000201711 Celsr2Q9R0M0 2920 aa9.72□□□□□ -0.85
Pdgfra-205ENSMUST00000201711 Gm904Q3V2L5 102 aa9.72□□□□□ -0.85
Pdgfra-205ENSMUST00000201711 Trav13d-4A0A0G2JFX3 110 aa9.71□□□□□ -0.85
Pdgfra-205ENSMUST00000201711 Wfdc15aQ8BH89 80 aa9.71□□□□□ -0.85
Pdgfra-205ENSMUST00000201711 Gphb5Q812B2 130 aa9.71□□□□□ -0.86
Pdgfra-205ENSMUST00000201711 Gm10300Q8C8P7 189 aa9.71□□□□□ -0.86
Pdgfra-205ENSMUST00000201711 Ly6c2P0CW03 131 aa9.71□□□□□ -0.86
Pdgfra-205ENSMUST00000201711 Gm9936Q8C864 160 aa9.71□□□□□ -0.86
Pdgfra-205ENSMUST00000201711 Nf1Q04690 2841 aa9.7□□□□□ -0.86
Pdgfra-205ENSMUST00000201711 Igkv8-24A0A140T8P5 121 aa9.7□□□□□ -0.86
Pdgfra-205ENSMUST00000201711 Smr3aQ61900 147 aa9.7□□□□□ -0.86
Pdgfra-205ENSMUST00000201711 Nsd1O88491 2588 aaKnown RBP9.7□□□□□ -0.86
Retrieved 100 of 22,080 RNA–protein pairs in 9.5 ms