RNA–Protein interactions for RNA: ENSMUST00000192221.5

Pcdh9-202, Transcript of Protocadherin 9, mousemouse

TSL 1 (best) BASIC

Gene Pcdh9, Length 5,161 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh9-202ENSMUST00000192221 Tcl1b5P56845 121 aa4.4□□□□□ -1.71
Pcdh9-202ENSMUST00000192221 Sdk2Q6V4S5 2176 aa4.4□□□□□ -1.71
Pcdh9-202ENSMUST00000192221 Igkv1-88A0A140T8N1 120 aa4.4□□□□□ -1.71
Pcdh9-202ENSMUST00000192221 Rps28P62858 69 aaKnown RBP4.4□□□□□ -1.71
Pcdh9-202ENSMUST00000192221 Gm10306Q9CUK2 115 aa4.4□□□□□ -1.71
Pcdh9-202ENSMUST00000192221 CstadQ9D245 104 aa4.4□□□□□ -1.71
Pcdh9-202ENSMUST00000192221 Q9DAQ5 155 aa4.4□□□□□ -1.71
Pcdh9-202ENSMUST00000192221 CtrlQ9ER05 264 aa4.4□□□□□ -1.71
Pcdh9-202ENSMUST00000192221 Col5a1O88207 1838 aa4.39□□□□□ -1.71
Pcdh9-202ENSMUST00000192221 Ankrd12G5E893 2041 aa4.39□□□□□ -1.71
Pcdh9-202ENSMUST00000192221 HelzQ6DFV5 1964 aaKnown RBP4.39□□□□□ -1.71
Pcdh9-202ENSMUST00000192221 Gm17359A0A0G2JEB7 487 aa4.39□□□□□ -1.71
Pcdh9-202ENSMUST00000192221 Rpl28P41105 137 aaKnown RBP4.39□□□□□ -1.71
Pcdh9-202ENSMUST00000192221 Defb4P82019 63 aa4.39□□□□□ -1.71
Pcdh9-202ENSMUST00000192221 Gm5941Q497P9 117 aa4.39□□□□□ -1.71
Pcdh9-202ENSMUST00000192221 Ighv1-50A0A075B5W1 117 aa4.39□□□□□ -1.71
Pcdh9-202ENSMUST00000192221 Igkv1-35A0A0G2JDE5 120 aa4.39□□□□□ -1.71
Pcdh9-202ENSMUST00000192221 Gm9925F6T2U3 160 aa4.39□□□□□ -1.71
Pcdh9-202ENSMUST00000192221 P0C913 63 aa4.39□□□□□ -1.71
Pcdh9-202ENSMUST00000192221 Ighv8-11A0A075B5X4 119 aa4.39□□□□□ -1.71
Pcdh9-202ENSMUST00000192221 Ighv1-19A0A0A6YWX0 117 aa4.39□□□□□ -1.71
Pcdh9-202ENSMUST00000192221 P04940 107 aa4.39□□□□□ -1.71
Pcdh9-202ENSMUST00000192221 P04941 107 aa4.39□□□□□ -1.71
Pcdh9-202ENSMUST00000192221 Rbx1P62878 108 aa4.39□□□□□ -1.71
Pcdh9-202ENSMUST00000192221 Dock8Q8C147 2100 aa4.39□□□□□ -1.71
Pcdh9-202ENSMUST00000192221 Igkv3-7A0A0G2JE31 119 aa4.39□□□□□ -1.71
Pcdh9-202ENSMUST00000192221 Col6a6Q8C6K9 2265 aa4.38□□□□□ -1.71
Pcdh9-202ENSMUST00000192221 Cep295Q8BQ48 2412 aa4.38□□□□□ -1.71
Pcdh9-202ENSMUST00000192221 P04943 107 aa4.38□□□□□ -1.71
Pcdh9-202ENSMUST00000192221 ScxQ64124 207 aa4.38□□□□□ -1.71
Pcdh9-202ENSMUST00000192221 Wnk1P83741 2377 aa4.38□□□□□ -1.71
Pcdh9-202ENSMUST00000192221 Zfhx2Q2MHN3 2562 aa4.38□□□□□ -1.71
Pcdh9-202ENSMUST00000192221 Trav13n-2A0A0G2JF93 110 aa4.38□□□□□ -1.71
Pcdh9-202ENSMUST00000192221 Cacna1iE9Q7P2 2199 aa4.38□□□□□ -1.71
Pcdh9-202ENSMUST00000192221 AgrnA2ASQ1 1950 aa4.38□□□□□ -1.71
Pcdh9-202ENSMUST00000192221 Zic4Q61467 341 aa4.38□□□□□ -1.71
Pcdh9-202ENSMUST00000192221 AtrxQ61687 2476 aaKnown RBP4.38□□□□□ -1.71
Pcdh9-202ENSMUST00000192221 Ighv1-55A0A075B5W6 117 aa4.38□□□□□ -1.71
Pcdh9-202ENSMUST00000192221 Ighv1-64A0A075B5X3 117 aa4.38□□□□□ -1.71
Pcdh9-202ENSMUST00000192221 Shisa3Q3UPR0 238 aa4.38□□□□□ -1.71
Pcdh9-202ENSMUST00000192221 Gm10384Q3UQ87 92 aa4.38□□□□□ -1.71
Pcdh9-202ENSMUST00000192221 9130230L23RikQ8CC80 163 aa4.38□□□□□ -1.71
Pcdh9-202ENSMUST00000192221 Col27a1Q5QNQ9 1845 aa4.37□□□□□ -1.71
Pcdh9-202ENSMUST00000192221 Ighv1-85A0A075B5Y6 117 aa4.37□□□□□ -1.71
Pcdh9-202ENSMUST00000192221 Ighv1-69A0A0G2JFS5 117 aa4.37□□□□□ -1.71
Pcdh9-202ENSMUST00000192221 Odf1Q61999 247 aa4.37□□□□□ -1.71
Pcdh9-202ENSMUST00000192221 5730596B20RikQ8BQ08 205 aa4.37□□□□□ -1.71
Pcdh9-202ENSMUST00000192221 MgaA2AWL7 3003 aaKnown RBP4.37□□□□□ -1.71
Pcdh9-202ENSMUST00000192221 A030003K21RikA0A1Y7VIM3 128 aa4.37□□□□□ -1.71
Pcdh9-202ENSMUST00000192221 MsmpB1AWI6 139 aa4.37□□□□□ -1.71
Pcdh9-202ENSMUST00000192221 Ndufa4l2Q4FZG9 87 aa4.37□□□□□ -1.71
Pcdh9-202ENSMUST00000192221 Msrb3Q8BU85 253 aa4.37□□□□□ -1.71
Pcdh9-202ENSMUST00000192221 Cacna1gQ5SUF7 2381 aa4.37□□□□□ -1.71
Pcdh9-202ENSMUST00000192221 P18528 98 aa4.37□□□□□ -1.71
Pcdh9-202ENSMUST00000192221 4930564D02RikQ9D4S4 103 aa4.37□□□□□ -1.71
Pcdh9-202ENSMUST00000192221 CrebbpP45481 2441 aa4.37□□□□□ -1.71
Pcdh9-202ENSMUST00000192221 Dennd4cA6H8H2 1906 aa4.37□□□□□ -1.71
Pcdh9-202ENSMUST00000192221 Trav13-2A0A075B649 110 aa4.36□□□□□ -1.71
Pcdh9-202ENSMUST00000192221 Ighv1-11A0A0A6YWI9 117 aa4.36□□□□□ -1.71
Pcdh9-202ENSMUST00000192221 CrygeQ03740 174 aa4.36□□□□□ -1.71
Pcdh9-202ENSMUST00000192221 AI606181Q8C7B9 129 aa4.36□□□□□ -1.71
Pcdh9-202ENSMUST00000192221 CrygfQ9CXV3 174 aa4.36□□□□□ -1.71
Pcdh9-202ENSMUST00000192221 Cysrt1Q9D1E4 142 aa4.36□□□□□ -1.71
Pcdh9-202ENSMUST00000192221 Bean1Q9EQG5 255 aa4.36□□□□□ -1.71
Pcdh9-202ENSMUST00000192221 Ramp1Q9WTJ5 148 aa4.36□□□□□ -1.71
Pcdh9-202ENSMUST00000192221 Tns1E9Q0S6 1888 aaKnown RBP4.36□□□□□ -1.71
Pcdh9-202ENSMUST00000192221 Map6d1Q14BB9 191 aa4.36□□□□□ -1.71
Pcdh9-202ENSMUST00000192221 Kif26bQ7TNC6 2112 aa4.36□□□□□ -1.71
Pcdh9-202ENSMUST00000192221 Q80X32 188 aaKnown RBP4.36□□□□□ -1.71
Pcdh9-202ENSMUST00000192221 Gm9913Q8BQQ2 135 aa4.36□□□□□ -1.71
Pcdh9-202ENSMUST00000192221 Scn2aA0A0J9YTW6 2006 aa4.36□□□□□ -1.71
Pcdh9-202ENSMUST00000192221 Nckap5E9QAE1 1909 aa4.36□□□□□ -1.71
Pcdh9-202ENSMUST00000192221 P04942 107 aa4.36□□□□□ -1.71
Pcdh9-202ENSMUST00000192221 Eif4ebp3Q80VV3 101 aa4.36□□□□□ -1.71
Pcdh9-202ENSMUST00000192221 Col4a2P08122 1707 aa4.36□□□□□ -1.71
Pcdh9-202ENSMUST00000192221 Ighv1-72P01751 139 aa4.36□□□□□ -1.71
Pcdh9-202ENSMUST00000192221 Prr3Q811B5 190 aaKnown RBP4.36□□□□□ -1.71
Pcdh9-202ENSMUST00000192221 Lce6aD3YV94 81 aa4.35□□□□□ -1.71
Pcdh9-202ENSMUST00000192221 Ebi3O35228 228 aa4.35□□□□□ -1.71
Pcdh9-202ENSMUST00000192221 Fhl1P97447 280 aaKnown RBP4.35□□□□□ -1.71
Pcdh9-202ENSMUST00000192221 Loxhd1C8YR32 2068 aa4.35□□□□□ -1.71
Pcdh9-202ENSMUST00000192221 Ighv10-3A0A075B5T6 119 aa4.35□□□□□ -1.71
Pcdh9-202ENSMUST00000192221 Igkv8-28A0A0G2JE47 121 aa4.35□□□□□ -1.71
Pcdh9-202ENSMUST00000192221 Gm4744D3Z3S5 154 aa4.35□□□□□ -1.71
Pcdh9-202ENSMUST00000192221 AmelxP63277 210 aa4.35□□□□□ -1.71
Pcdh9-202ENSMUST00000192221 Armcx4E9PWM3 2356 aa4.35□□□□□ -1.71
Pcdh9-202ENSMUST00000192221 PlaurP35456 327 aa4.35□□□□□ -1.71
Pcdh9-202ENSMUST00000192221 Plac8l1Q08EJ0 177 aa4.35□□□□□ -1.71
Pcdh9-202ENSMUST00000192221 Pate4Q09098 99 aa4.35□□□□□ -1.71
Pcdh9-202ENSMUST00000192221 Fam19a4Q7TPG5 135 aa4.35□□□□□ -1.71
Pcdh9-202ENSMUST00000192221 Trank1Q8BV79 2999 aa4.35□□□□□ -1.71
Pcdh9-202ENSMUST00000192221 Ighv1-4A0A075B5T4 117 aa4.34□□□□□ -1.71
Pcdh9-202ENSMUST00000192221 Ighv2-6A0A075B6A7 116 aa4.34□□□□□ -1.71
Pcdh9-202ENSMUST00000192221 Gm6899Q3USS0 134 aa4.34□□□□□ -1.71
Pcdh9-202ENSMUST00000192221 Cd164l2Q9D6W7 172 aa4.34□□□□□ -1.71
Pcdh9-202ENSMUST00000192221 Zfp407G3UVV3 2246 aa4.34□□□□□ -1.71
Pcdh9-202ENSMUST00000192221 Ighv8-5A0A0A6YY60 119 aa4.34□□□□□ -1.71
Pcdh9-202ENSMUST00000192221 Triap1Q9D8Z2 76 aa4.34□□□□□ -1.71
Pcdh9-202ENSMUST00000192221 Tnrc6aQ3UHK8 1896 aaKnown RBP4.34□□□□□ -1.71
Pcdh9-202ENSMUST00000192221 Nav3Q80TN7 2359 aa4.34□□□□□ -1.71
Retrieved 100 of 22,080 RNA–protein pairs in 55.4 ms