RNA–Protein interactions for RNA: ENSMUST00000040182.12

Ccdc88a-201, Transcript of Girdin, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Ccdc88a, Length 9,376 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-201ENSMUST00000040182 Reg3bP35230 175 aa12.74□□□□□ -0.37
Ccdc88a-201ENSMUST00000040182 Igkv2-109A0A075B5K6 120 aa12.73□□□□□ -0.37
Ccdc88a-201ENSMUST00000040182 Ndufa4l2Q4FZG9 87 aa12.73□□□□□ -0.37
Ccdc88a-201ENSMUST00000040182 Ighv1-61P01749 117 aa12.73□□□□□ -0.37
Ccdc88a-201ENSMUST00000040182 H2al1aQ5M8Q2 105 aa12.72□□□□□ -0.37
Ccdc88a-201ENSMUST00000040182 H2al1eQ810S6 105 aa12.72□□□□□ -0.37
Ccdc88a-201ENSMUST00000040182 Atox1O08997 68 aaKnown RBP12.72□□□□□ -0.37
Ccdc88a-201ENSMUST00000040182 Cox7a1P56392 80 aa12.72□□□□□ -0.37
Ccdc88a-201ENSMUST00000040182 P0C913 63 aa12.72□□□□□ -0.37
Ccdc88a-201ENSMUST00000040182 Rpl39lQ9CQD0 51 aa12.72□□□□□ -0.37
Ccdc88a-201ENSMUST00000040182 Gm10401E9Q3K6 71 aa12.72□□□□□ -0.37
Ccdc88a-201ENSMUST00000040182 Ighv12-3A0A075B5T1 117 aa12.71□□□□□ -0.37
Ccdc88a-201ENSMUST00000040182 Gphb5Q812B2 130 aa12.71□□□□□ -0.37
Ccdc88a-201ENSMUST00000040182 9230109A22RikQ8BHE6 111 aa12.71□□□□□ -0.37
Ccdc88a-201ENSMUST00000040182 Gm5878E9PUB3 99 aa12.71□□□□□ -0.38
Ccdc88a-201ENSMUST00000040182 A230072I06RikQ3UUJ8 172 aa12.71□□□□□ -0.38
Ccdc88a-201ENSMUST00000040182 Ighv1-75A0A075B5Y2 117 aa12.71□□□□□ -0.38
Ccdc88a-201ENSMUST00000040182 4930470P17RikQ9D542 155 aa12.7□□□□□ -0.38
Ccdc88a-201ENSMUST00000040182 OdaphJ3QNT8 126 aa12.7□□□□□ -0.38
Ccdc88a-201ENSMUST00000040182 Gm42674D3YUT9 64 aa12.7□□□□□ -0.38
Ccdc88a-201ENSMUST00000040182 Cfc1P97766 202 aa12.69□□□□□ -0.38
Ccdc88a-201ENSMUST00000040182 Igkv1-35A0A0G2JDE5 120 aa12.69□□□□□ -0.38
Ccdc88a-201ENSMUST00000040182 Trav9n-4A0A075B631 113 aa12.69□□□□□ -0.38
Ccdc88a-201ENSMUST00000040182 Trav13d-4A0A0G2JFX3 110 aa12.69□□□□□ -0.38
Ccdc88a-201ENSMUST00000040182 Ighv2-6-8A0A0A6YWY9 116 aa12.69□□□□□ -0.38
Ccdc88a-201ENSMUST00000040182 Ighv10-1A0A0B4J1J6 119 aa12.69□□□□□ -0.38
Ccdc88a-201ENSMUST00000040182 Prp2P05143 317 aa12.68□□□□□ -0.38
Ccdc88a-201ENSMUST00000040182 Timm17bQ9Z0V7 172 aa12.68□□□□□ -0.38
Ccdc88a-201ENSMUST00000040182 Ebi3O35228 228 aa12.68□□□□□ -0.38
Ccdc88a-201ENSMUST00000040182 P01674 108 aa12.68□□□□□ -0.38
Ccdc88a-201ENSMUST00000040182 Fam19a4Q7TPG5 135 aa12.68□□□□□ -0.38
Ccdc88a-201ENSMUST00000040182 IgipA0A1B0GR74 53 aa12.68□□□□□ -0.38
Ccdc88a-201ENSMUST00000040182 Igkv8-21A0A140T8P7 120 aa12.68□□□□□ -0.38
Ccdc88a-201ENSMUST00000040182 Gm10553J3QPF1 123 aa12.68□□□□□ -0.38
Ccdc88a-201ENSMUST00000040182 Defb12Q8K4N3 78 aa12.68□□□□□ -0.38
Ccdc88a-201ENSMUST00000040182 Ighv1-85A0A075B5Y6 117 aa12.67□□□□□ -0.38
Ccdc88a-201ENSMUST00000040182 Gm17521F6QAC8 156 aa12.67□□□□□ -0.38
Ccdc88a-201ENSMUST00000040182 Wfdc15bQ9JHY4 80 aa12.67□□□□□ -0.38
Ccdc88a-201ENSMUST00000040182 Gm21060J3KMU4 56 aa12.67□□□□□ -0.38
Ccdc88a-201ENSMUST00000040182 Ndufs5Q99LY9 106 aa12.67□□□□□ -0.38
Ccdc88a-201ENSMUST00000040182 Trbv13-1A0A0B4J1P8 112 aa12.67□□□□□ -0.38
Ccdc88a-201ENSMUST00000040182 P01643 108 aa12.67□□□□□ -0.38
Ccdc88a-201ENSMUST00000040182 Odf3l1Q810P2 275 aa12.67□□□□□ -0.38
Ccdc88a-201ENSMUST00000040182 Col4a6B1AVK5 1691 aa12.67□□□□□ -0.38
Ccdc88a-201ENSMUST00000040182 Rnase1P00683 149 aa12.67□□□□□ -0.38
Ccdc88a-201ENSMUST00000040182 Igkv3-3A0A140T8Q0 119 aa12.66□□□□□ -0.38
Ccdc88a-201ENSMUST00000040182 CrygcQ61597 174 aa12.66□□□□□ -0.38
Ccdc88a-201ENSMUST00000040182 Ighv2-7A0A075B5Q8 116 aa12.66□□□□□ -0.38
Ccdc88a-201ENSMUST00000040182 Rnf152Q8BG47 203 aa12.66□□□□□ -0.38
Ccdc88a-201ENSMUST00000040182 9530003J23RikQ8BM26 151 aa12.66□□□□□ -0.38
Ccdc88a-201ENSMUST00000040182 Psmb8P28063 276 aa12.66□□□□□ -0.38
Ccdc88a-201ENSMUST00000040182 1810032O08RikE9PZV8 113 aa12.65□□□□□ -0.38
Ccdc88a-201ENSMUST00000040182 AW146154Q3TPQ7 468 aa12.65□□□□□ -0.38
Ccdc88a-201ENSMUST00000040182 Prr15lQ8JZM2 100 aa12.65□□□□□ -0.38
Ccdc88a-201ENSMUST00000040182 Triap1Q9D8Z2 76 aa12.65□□□□□ -0.38
Ccdc88a-201ENSMUST00000040182 Ighv1-5A0A0A6YWG2 117 aa12.64□□□□□ -0.39
Ccdc88a-201ENSMUST00000040182 Trav13n-1A0A0G2JEU8 110 aa12.64□□□□□ -0.39
Ccdc88a-201ENSMUST00000040182 P06328 117 aa12.64□□□□□ -0.39
Ccdc88a-201ENSMUST00000040182 Prh1P05142 261 aa12.63□□□□□ -0.39
Ccdc88a-201ENSMUST00000040182 Gm17324Q8C6J8 137 aa12.63□□□□□ -0.39
Ccdc88a-201ENSMUST00000040182 Zfand3Q497H0 227 aa12.63□□□□□ -0.39
Ccdc88a-201ENSMUST00000040182 Nsun4C4P6S0 806 aaKnown RBP12.62□□□□□ -0.39
Ccdc88a-201ENSMUST00000040182 Gm15557A6PWY0 234 aa12.62□□□□□ -0.39
Ccdc88a-201ENSMUST00000040182 Ighv8-12A0A0G2JDE1 119 aa12.62□□□□□ -0.39
Ccdc88a-201ENSMUST00000040182 Ighv1-82A0A0G2JEU7 117 aa12.62□□□□□ -0.39
Ccdc88a-201ENSMUST00000040182 Ube2d4D3YUH6 135 aa12.62□□□□□ -0.39
Ccdc88a-201ENSMUST00000040182 9430015G10RikA2ASP7 199 aa12.61□□□□□ -0.39
Ccdc88a-201ENSMUST00000040182 Trav13d-1A0A075B606 110 aa12.61□□□□□ -0.39
Ccdc88a-201ENSMUST00000040182 Trav13-2A0A075B649 110 aa12.61□□□□□ -0.39
Ccdc88a-201ENSMUST00000040182 Serp2Q6TAW2 65 aa12.61□□□□□ -0.39
Ccdc88a-201ENSMUST00000040182 Ufsp1Q9CZP0 217 aa12.61□□□□□ -0.39
Ccdc88a-201ENSMUST00000040182 Trav13n-2A0A0G2JF93 110 aa12.6□□□□□ -0.39
Ccdc88a-201ENSMUST00000040182 MtorQ9JLN9 2549 aa12.6□□□□□ -0.39
Ccdc88a-201ENSMUST00000040182 9130230L23RikQ8CC80 163 aa12.6□□□□□ -0.39
Ccdc88a-201ENSMUST00000040182 BlcapP62951 87 aa12.6□□□□□ -0.39
Ccdc88a-201ENSMUST00000040182 Gm5629P06327 117 aa12.6□□□□□ -0.39
Ccdc88a-201ENSMUST00000040182 Plac8l1Q08EJ0 177 aa12.6□□□□□ -0.39
Ccdc88a-201ENSMUST00000040182 CenpwQ3URR0 86 aa12.6□□□□□ -0.39
Ccdc88a-201ENSMUST00000040182 Trav13-4-dv7A0A075B6C2 110 aa12.59□□□□□ -0.39
Ccdc88a-201ENSMUST00000040182 Gm9958Q8C9U4 106 aa12.59□□□□□ -0.39
Ccdc88a-201ENSMUST00000040182 Fam19a1Q7TPG8 133 aa12.59□□□□□ -0.39
Ccdc88a-201ENSMUST00000040182 Chd8Q09XV5 2582 aaKnown RBP12.59□□□□□ -0.39
Ccdc88a-201ENSMUST00000040182 Tcl1b5P56845 121 aa12.59□□□□□ -0.39
Ccdc88a-201ENSMUST00000040182 Cox8cA6H666 72 aa12.59□□□□□ -0.39
Ccdc88a-201ENSMUST00000040182 Gm10337F7DEP7 55 aa12.58□□□□□ -0.4
Ccdc88a-201ENSMUST00000040182 Gm10542F6XDR3 90 aa12.58□□□□□ -0.4
Ccdc88a-201ENSMUST00000040182 Defb13Q8R2I4 64 aa12.58□□□□□ -0.4
Ccdc88a-201ENSMUST00000040182 Igkv4-92A0A0B4J1I2 117 aa12.58□□□□□ -0.4
Ccdc88a-201ENSMUST00000040182 Higd2aQ9CQJ1 106 aa12.58□□□□□ -0.4
Ccdc88a-201ENSMUST00000040182 Iglv1A0A075B663 117 aa12.58□□□□□ -0.4
Ccdc88a-201ENSMUST00000040182 1700074P13RikQ9D9G7 251 aa12.58□□□□□ -0.4
Ccdc88a-201ENSMUST00000040182 Ankrd17Q99NH0 2603 aaKnown RBP12.58□□□□□ -0.4
Ccdc88a-201ENSMUST00000040182 CtrlQ9ER05 264 aa12.57□□□□□ -0.4
Ccdc88a-201ENSMUST00000040182 Crip1P63254 77 aa12.57□□□□□ -0.4
Ccdc88a-201ENSMUST00000040182 Fgfbp3Q1HCM0 245 aa12.57□□□□□ -0.4
Ccdc88a-201ENSMUST00000040182 A830005F24RikQ8BRT5 167 aa12.57□□□□□ -0.4
Ccdc88a-201ENSMUST00000040182 Cox7bP56393 80 aa12.57□□□□□ -0.4
Ccdc88a-201ENSMUST00000040182 Spry2Q9QXV8 315 aa12.56□□□□□ -0.4
Ccdc88a-201ENSMUST00000040182 Gm9805F6YK59 57 aa12.56□□□□□ -0.4
Ccdc88a-201ENSMUST00000040182 Fgf23Q9EPC2 251 aa12.55□□□□□ -0.4
Retrieved 100 of 22,080 RNA–protein pairs in 51.9 ms