RNA–Protein interactions for RNA: ENSMUST00000035283.10

Nup88-201, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,450 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-201ENSMUST00000035283 Gm9747Q810H1 104 aa9.78□□□□□ -0.84
Nup88-201ENSMUST00000035283 Fam216aQ9DB54 251 aa9.78□□□□□ -0.84
Nup88-201ENSMUST00000035283 Notch3Q61982 2318 aa9.77□□□□□ -0.84
Nup88-201ENSMUST00000035283 Ighv1-58A0A075B5W9 117 aa9.77□□□□□ -0.85
Nup88-201ENSMUST00000035283 Gm9513B3GLJ6 99 aa9.77□□□□□ -0.85
Nup88-201ENSMUST00000035283 GalmQ8K157 342 aa9.77□□□□□ -0.85
Nup88-201ENSMUST00000035283 A930009A15RikG3UYI6 118 aa9.76□□□□□ -0.85
Nup88-201ENSMUST00000035283 Gm10509O88255 85 aa9.76□□□□□ -0.85
Nup88-201ENSMUST00000035283 Helz2E9QAM5 2947 aaKnown RBP9.76□□□□□ -0.85
Nup88-201ENSMUST00000035283 Dynlrb2Q9DAJ5 96 aa9.76□□□□□ -0.85
Nup88-201ENSMUST00000035283 Igkv4-78A0A0A6YYE5 119 aa9.75□□□□□ -0.85
Nup88-201ENSMUST00000035283 Gm21994F6T2D2 329 aa9.75□□□□□ -0.85
Nup88-201ENSMUST00000035283 Spink10Q8CAC8 162 aa9.75□□□□□ -0.85
Nup88-201ENSMUST00000035283 Nav3Q80TN7 2359 aa9.75□□□□□ -0.85
Nup88-201ENSMUST00000035283 AcacbE9Q4Z2 2448 aa9.75□□□□□ -0.85
Nup88-201ENSMUST00000035283 Gm26661M0QWV4 156 aa9.75□□□□□ -0.85
Nup88-201ENSMUST00000035283 Ly86O88188 162 aa9.75□□□□□ -0.85
Nup88-201ENSMUST00000035283 Tmem213Q08EA8 116 aa9.75□□□□□ -0.85
Nup88-201ENSMUST00000035283 March3Q8BRX9 218 aa9.75□□□□□ -0.85
Nup88-201ENSMUST00000035283 Nbeal1E9PYP2 2688 aa9.74□□□□□ -0.85
Nup88-201ENSMUST00000035283 Trdv5A0A075B661 115 aa9.74□□□□□ -0.85
Nup88-201ENSMUST00000035283 Gm37988J3QM41 62 aa9.74□□□□□ -0.85
Nup88-201ENSMUST00000035283 Ighv1-72P01751 139 aa9.74□□□□□ -0.85
Nup88-201ENSMUST00000035283 NrgnP60761 78 aa9.74□□□□□ -0.85
Nup88-201ENSMUST00000035283 Usp9xP70398 2559 aaKnown RBP9.74□□□□□ -0.85
Nup88-201ENSMUST00000035283 Igkv4-68A0A0B4J1I7 117 aa9.74□□□□□ -0.85
Nup88-201ENSMUST00000035283 Gm9925F6T2U3 160 aa9.74□□□□□ -0.85
Nup88-201ENSMUST00000035283 Fhl2O70433 279 aa9.74□□□□□ -0.85
Nup88-201ENSMUST00000035283 Pip4p1Q3TWL2 284 aa9.74□□□□□ -0.85
Nup88-201ENSMUST00000035283 Ighv1-11A0A0A6YWI9 117 aa9.73□□□□□ -0.85
Nup88-201ENSMUST00000035283 Psmb8P28063 276 aa9.73□□□□□ -0.85
Nup88-201ENSMUST00000035283 SvipQ3UZP4 77 aa9.73□□□□□ -0.85
Nup88-201ENSMUST00000035283 Dmbt1Q60997 2085 aa9.72□□□□□ -0.85
Nup88-201ENSMUST00000035283 Ighv5-9-1A0A0A6YVS4 126 aa9.72□□□□□ -0.85
Nup88-201ENSMUST00000035283 Reg3gO09049 174 aa9.72□□□□□ -0.85
Nup88-201ENSMUST00000035283 Prelid3aQ8VE85 172 aa9.72□□□□□ -0.85
Nup88-201ENSMUST00000035283 Tmem101Q91VP7 257 aa9.72□□□□□ -0.85
Nup88-201ENSMUST00000035283 Trav9n-2A0A0G2JDP3 113 aa9.72□□□□□ -0.85
Nup88-201ENSMUST00000035283 4930432M17RikQ3V0W9 174 aa9.72□□□□□ -0.85
Nup88-201ENSMUST00000035283 Eif4ebp1Q60876 117 aa9.72□□□□□ -0.85
Nup88-201ENSMUST00000035283 Gatd1Q8BFQ8 220 aa9.72□□□□□ -0.85
Nup88-201ENSMUST00000035283 SpinklQ8CEK3 90 aa9.72□□□□□ -0.85
Nup88-201ENSMUST00000035283 4930442H23RikQ9D5G7 103 aa9.72□□□□□ -0.85
Nup88-201ENSMUST00000035283 Abca12E9Q876 2595 aa9.71□□□□□ -0.85
Nup88-201ENSMUST00000035283 Gm10542F6XDR3 90 aa9.71□□□□□ -0.85
Nup88-201ENSMUST00000035283 H1fxQ80ZM5 188 aa9.71□□□□□ -0.85
Nup88-201ENSMUST00000035283 Gm9922Q8C3P1 144 aa9.71□□□□□ -0.85
Nup88-201ENSMUST00000035283 Ptpn13Q64512 2453 aa9.71□□□□□ -0.85
Nup88-201ENSMUST00000035283 Chd6A3KFM7 2711 aa9.71□□□□□ -0.86
Nup88-201ENSMUST00000035283 Gm10735Q3US96 136 aa9.71□□□□□ -0.86
Nup88-201ENSMUST00000035283 Morn3Q8C5T4 241 aa9.71□□□□□ -0.86
Nup88-201ENSMUST00000035283 Cox6cQ9CPQ1 76 aa9.71□□□□□ -0.86
Nup88-201ENSMUST00000035283 Spry2Q9QXV8 315 aa9.71□□□□□ -0.86
Nup88-201ENSMUST00000035283 Nf1Q04690 2841 aa9.7□□□□□ -0.86
Nup88-201ENSMUST00000035283 Trav13n-1A0A0G2JEU8 110 aa9.7□□□□□ -0.86
Nup88-201ENSMUST00000035283 Znf740Q6NZQ6 180 aa9.7□□□□□ -0.86
Nup88-201ENSMUST00000035283 4930470P17RikQ9D542 155 aa9.7□□□□□ -0.86
Nup88-201ENSMUST00000035283 Ly6hQ9WUC3 139 aa9.7□□□□□ -0.86
Nup88-201ENSMUST00000035283 Bahcc1Q3UHR0 2643 aa9.7□□□□□ -0.86
Nup88-201ENSMUST00000035283 Gm28539A0A087WSL9 92 aa9.7□□□□□ -0.86
Nup88-201ENSMUST00000035283 P01823 113 aa9.7□□□□□ -0.86
Nup88-201ENSMUST00000035283 Foxc1Q61572 553 aa9.7□□□□□ -0.86
Nup88-201ENSMUST00000035283 Timm17bQ9Z0V7 172 aa9.7□□□□□ -0.86
Nup88-201ENSMUST00000035283 Arid1bE9Q4N7 2244 aa9.69□□□□□ -0.86
Nup88-201ENSMUST00000035283 NbasE9Q411 2356 aa9.69□□□□□ -0.86
Nup88-201ENSMUST00000035283 Ang3P97802 145 aa9.69□□□□□ -0.86
Nup88-201ENSMUST00000035283 Fgfbp3Q1HCM0 245 aa9.68□□□□□ -0.86
Nup88-201ENSMUST00000035283 Rnf183Q8QZS5 190 aa9.68□□□□□ -0.86
Nup88-201ENSMUST00000035283 Trav4d-3A0A075B625 110 aa9.68□□□□□ -0.86
Nup88-201ENSMUST00000035283 Gm10322F7D7I4 111 aa9.68□□□□□ -0.86
Nup88-201ENSMUST00000035283 Ndufa3Q9CQ91 84 aa9.68□□□□□ -0.86
Nup88-201ENSMUST00000035283 Trav4-3A0A0B4J1K1 110 aa9.67□□□□□ -0.86
Nup88-201ENSMUST00000035283 Cox17P56394 63 aa9.67□□□□□ -0.86
Nup88-201ENSMUST00000035283 Gm815Q3UWS2 115 aa9.67□□□□□ -0.86
Nup88-201ENSMUST00000035283 Shisa2Q8QZV2 295 aa9.67□□□□□ -0.86
Nup88-201ENSMUST00000035283 Sostdc1Q9CQN4 206 aa9.67□□□□□ -0.86
Nup88-201ENSMUST00000035283 Smim20D3Z7Q2 69 aa9.66□□□□□ -0.86
Nup88-201ENSMUST00000035283 Atp5eP56382 52 aa9.66□□□□□ -0.86
Nup88-201ENSMUST00000035283 Gm904Q3V2L5 102 aa9.66□□□□□ -0.86
Nup88-201ENSMUST00000035283 TeppQ6IMH0 216 aa9.66□□□□□ -0.86
Nup88-201ENSMUST00000035283 RetnQ99P87 114 aa9.66□□□□□ -0.86
Nup88-201ENSMUST00000035283 P01738 130 aa9.66□□□□□ -0.86
Nup88-201ENSMUST00000035283 Ube2e2Q91W82 201 aa9.66□□□□□ -0.86
Nup88-201ENSMUST00000035283 Phpt1Q9DAK9 124 aa9.66□□□□□ -0.86
Nup88-201ENSMUST00000035283 Xlr5cQ9JJR2 179 aa9.66□□□□□ -0.86
Nup88-201ENSMUST00000035283 Esm1Q9QYY7 184 aa9.66□□□□□ -0.86
Nup88-201ENSMUST00000035283 PkigO70139 76 aa9.65□□□□□ -0.86
Nup88-201ENSMUST00000035283 Klk1b4P00757 256 aa9.65□□□□□ -0.86
Nup88-201ENSMUST00000035283 CdsnQ7TPC1 561 aa9.65□□□□□ -0.86
Nup88-201ENSMUST00000035283 Atp5g1Q9CR84 136 aa9.65□□□□□ -0.86
Nup88-201ENSMUST00000035283 Zfyve26Q5DU37 2529 aa9.65□□□□□ -0.86
Nup88-201ENSMUST00000035283 Igkv4-79A0A075B5L8 119 aa9.65□□□□□ -0.86
Nup88-201ENSMUST00000035283 P01786 117 aa9.64□□□□□ -0.87
Nup88-201ENSMUST00000035283 Pglyrp4Q0VB07 374 aa9.64□□□□□ -0.87
Nup88-201ENSMUST00000035283 Fam110dQ80X91 271 aa9.64□□□□□ -0.87
Nup88-201ENSMUST00000035283 Trav3-4A0A075B654 114 aa9.64□□□□□ -0.87
Nup88-201ENSMUST00000035283 Smim10l1A0A087WNQ7 89 aa9.64□□□□□ -0.87
Nup88-201ENSMUST00000035283 Prp2P05143 317 aa9.64□□□□□ -0.87
Nup88-201ENSMUST00000035283 CirbpP60824 172 aaKnown RBP9.64□□□□□ -0.87
Nup88-201ENSMUST00000035283 1700010B08RikQ9DAI7 102 aa9.64□□□□□ -0.87
Retrieved 100 of 22,080 RNA–protein pairs in 81.7 ms