RNA–Protein interactions for RNA: ENSMUST00000112736.7

Vps4b-202, Transcript of Vacuolar protein sorting-associated protein 4B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Vps4b, Length 4,539 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4b-202ENSMUST00000112736 Ighv12-3A0A075B5T1 117 aa9.7□□□□□ -0.86
Vps4b-202ENSMUST00000112736 Ighv1-82A0A0G2JEU7 117 aa9.7□□□□□ -0.86
Vps4b-202ENSMUST00000112736 Trav9d-4A0A0G2JG37 103 aa9.69□□□□□ -0.86
Vps4b-202ENSMUST00000112736 Cops9Q3U898 57 aa9.69□□□□□ -0.86
Vps4b-202ENSMUST00000112736 C920008G01RikA0A0B4J1N1 112 aa9.69□□□□□ -0.86
Vps4b-202ENSMUST00000112736 4930415O20RikQ8CDT5 131 aa9.69□□□□□ -0.86
Vps4b-202ENSMUST00000112736 Pla2g2dQ9WVF6 144 aa9.69□□□□□ -0.86
Vps4b-202ENSMUST00000112736 Cox7a1P56392 80 aa9.68□□□□□ -0.86
Vps4b-202ENSMUST00000112736 Defb47Q30KN1 79 aa9.68□□□□□ -0.86
Vps4b-202ENSMUST00000112736 Dand5Q76LW6 185 aa9.68□□□□□ -0.86
Vps4b-202ENSMUST00000112736 ColqO35348 457 aa9.68□□□□□ -0.86
Vps4b-202ENSMUST00000112736 Gm7102J3QQ10 178 aa9.68□□□□□ -0.86
Vps4b-202ENSMUST00000112736 Tal2Q62282 108 aa9.68□□□□□ -0.86
Vps4b-202ENSMUST00000112736 Usp24B1AY13 2617 aaKnown RBP9.68□□□□□ -0.86
Vps4b-202ENSMUST00000112736 Q8R092 253 aa9.68□□□□□ -0.86
Vps4b-202ENSMUST00000112736 Gm16223Q8CBM3 117 aa9.67□□□□□ -0.86
Vps4b-202ENSMUST00000112736 Lyzl4Q9D925 145 aa9.67□□□□□ -0.86
Vps4b-202ENSMUST00000112736 FasnP19096 2504 aaKnown RBP9.67□□□□□ -0.86
Vps4b-202ENSMUST00000112736 Ighv1-53A0A075B5W3 117 aa9.67□□□□□ -0.86
Vps4b-202ENSMUST00000112736 Spata25Q9DA57 226 aa9.67□□□□□ -0.86
Vps4b-202ENSMUST00000112736 Vsig4F6TUL9 280 aa9.67□□□□□ -0.86
Vps4b-202ENSMUST00000112736 Defa16P50714 93 aa9.67□□□□□ -0.86
Vps4b-202ENSMUST00000112736 1500011B03RikQ3TTH7 73 aa9.67□□□□□ -0.86
Vps4b-202ENSMUST00000112736 Chchd5Q9CQP3 110 aa9.67□□□□□ -0.86
Vps4b-202ENSMUST00000112736 4930470P17RikQ9D542 155 aa9.67□□□□□ -0.86
Vps4b-202ENSMUST00000112736 Gm904Q3V2L5 102 aa9.66□□□□□ -0.86
Vps4b-202ENSMUST00000112736 Trav3-1Q5R1I8 114 aa9.66□□□□□ -0.86
Vps4b-202ENSMUST00000112736 Nhlrc1Q8BR37 401 aa9.66□□□□□ -0.86
Vps4b-202ENSMUST00000112736 Defb29Q8BGW9 78 aa9.66□□□□□ -0.86
Vps4b-202ENSMUST00000112736 Fam241bQ9D882 120 aa9.66□□□□□ -0.86
Vps4b-202ENSMUST00000112736 C1qcQ02105 246 aa9.66□□□□□ -0.86
Vps4b-202ENSMUST00000112736 Odf1Q61999 247 aa9.66□□□□□ -0.86
Vps4b-202ENSMUST00000112736 Trav13n-1A0A0G2JEU8 110 aa9.65□□□□□ -0.86
Vps4b-202ENSMUST00000112736 Gm44965A0A0N4SVR3 59 aa9.65□□□□□ -0.86
Vps4b-202ENSMUST00000112736 Gm867A0A1W2P7T4 151 aa9.65□□□□□ -0.86
Vps4b-202ENSMUST00000112736 Rtl10D3YWW5 146 aa9.65□□□□□ -0.86
Vps4b-202ENSMUST00000112736 Mpv17l2Q8VIK2 200 aa9.65□□□□□ -0.86
Vps4b-202ENSMUST00000112736 Gm5878E9PUB3 99 aa9.65□□□□□ -0.86
Vps4b-202ENSMUST00000112736 E130218I03RikA0A0U1RNU5 63 aa9.65□□□□□ -0.86
Vps4b-202ENSMUST00000112736 P18527 97 aa9.65□□□□□ -0.86
Vps4b-202ENSMUST00000112736 A530064D06RikQ8BNV8 229 aa9.65□□□□□ -0.86
Vps4b-202ENSMUST00000112736 Igkv3-1A0A075B5P1 119 aa9.64□□□□□ -0.87
Vps4b-202ENSMUST00000112736 Tmem86bQ497J1 226 aa9.64□□□□□ -0.87
Vps4b-202ENSMUST00000112736 Cfap126Q6P8X9 189 aa9.64□□□□□ -0.87
Vps4b-202ENSMUST00000112736 Mzt1Q8BUR9 78 aa9.64□□□□□ -0.87
Vps4b-202ENSMUST00000112736 Gm9573F7C950 1606 aa9.64□□□□□ -0.87
Vps4b-202ENSMUST00000112736 Gm10542F6XDR3 90 aa9.64□□□□□ -0.87
Vps4b-202ENSMUST00000112736 Dchs2A0A0A6YW72 3346 aa9.64□□□□□ -0.87
Vps4b-202ENSMUST00000112736 Dad1P61804 113 aa9.63□□□□□ -0.87
Vps4b-202ENSMUST00000112736 Tnfrsf23Q9ER63 176 aa9.63□□□□□ -0.87
Vps4b-202ENSMUST00000112736 Notch1Q01705 2531 aa9.63□□□□□ -0.87
Vps4b-202ENSMUST00000112736 Ighv2-3A0A075B696 115 aa9.63□□□□□ -0.87
Vps4b-202ENSMUST00000112736 Igkv8-24A0A140T8P5 121 aa9.63□□□□□ -0.87
Vps4b-202ENSMUST00000112736 Tcte2E9PY37 120 aa9.63□□□□□ -0.87
Vps4b-202ENSMUST00000112736 Ang3P97802 145 aa9.63□□□□□ -0.87
Vps4b-202ENSMUST00000112736 Hbb-b2P02089 147 aa9.63□□□□□ -0.87
Vps4b-202ENSMUST00000112736 P0C913 63 aa9.63□□□□□ -0.87
Vps4b-202ENSMUST00000112736 Vwc2lQ505H4 222 aa9.63□□□□□ -0.87
Vps4b-202ENSMUST00000112736 Ubr5Q80TP3 2792 aa9.63□□□□□ -0.87
Vps4b-202ENSMUST00000112736 Gatd1Q8BFQ8 220 aa9.63□□□□□ -0.87
Vps4b-202ENSMUST00000112736 Sh2d1aO88890 126 aa9.63□□□□□ -0.87
Vps4b-202ENSMUST00000112736 Ucn2Q99ML8 113 aa9.63□□□□□ -0.87
Vps4b-202ENSMUST00000112736 Akap13E9Q394 2776 aa9.62□□□□□ -0.87
Vps4b-202ENSMUST00000112736 Scgb1b2O35176 93 aa9.62□□□□□ -0.87
Vps4b-202ENSMUST00000112736 Ccl25O35903 144 aa9.62□□□□□ -0.87
Vps4b-202ENSMUST00000112736 BC048562Q80ZQ7 204 aa9.62□□□□□ -0.87
Vps4b-202ENSMUST00000112736 Klk5Q9D140 293 aa9.62□□□□□ -0.87
Vps4b-202ENSMUST00000112736 Snai3Q9QY31 287 aa9.62□□□□□ -0.87
Vps4b-202ENSMUST00000112736 Rnf185Q91YT2 192 aa9.62□□□□□ -0.87
Vps4b-202ENSMUST00000112736 P01896 185 aa9.62□□□□□ -0.87
Vps4b-202ENSMUST00000112736 TshbP12656 138 aa9.62□□□□□ -0.87
Vps4b-202ENSMUST00000112736 A130051J06RikQ8CAU1 227 aa9.62□□□□□ -0.87
Vps4b-202ENSMUST00000112736 Ighv1-62-2A0A0A6YXZ4 119 aa9.61□□□□□ -0.87
Vps4b-202ENSMUST00000112736 Igkv4-68A0A0B4J1I7 117 aa9.61□□□□□ -0.87
Vps4b-202ENSMUST00000112736 Iglc1A0A0G2JE99 106 aa9.61□□□□□ -0.87
Vps4b-202ENSMUST00000112736 P01843 105 aa9.61□□□□□ -0.87
Vps4b-202ENSMUST00000112736 1520401A03RikA0A0J9YVH6 598 aa9.61□□□□□ -0.87
Vps4b-202ENSMUST00000112736 LhbO09108 141 aa9.61□□□□□ -0.87
Vps4b-202ENSMUST00000112736 Rnase1P00683 149 aa9.61□□□□□ -0.87
Vps4b-202ENSMUST00000112736 Ly6g5bQ8K1T4 194 aa9.61□□□□□ -0.87
Vps4b-202ENSMUST00000112736 Crlf1Q9JM58 425 aa9.61□□□□□ -0.87
Vps4b-202ENSMUST00000112736 Wdfy4E9Q2M9 3149 aa9.61□□□□□ -0.87
Vps4b-202ENSMUST00000112736 Rpl32-psP17932 135 aa9.61□□□□□ -0.87
Vps4b-202ENSMUST00000112736 Mrpl35Q9CQL6 188 aa9.61□□□□□ -0.87
Vps4b-202ENSMUST00000112736 FlnaQ8BTM8 2647 aaKnown RBP9.6□□□□□ -0.87
Vps4b-202ENSMUST00000112736 Igkv8-16A0A0G2JDG9 121 aa9.6□□□□□ -0.87
Vps4b-202ENSMUST00000112736 Hrct1Q9D6B9 109 aa9.6□□□□□ -0.87
Vps4b-202ENSMUST00000112736 Hcfc1Q61191 2045 aaKnown RBP9.6□□□□□ -0.87
Vps4b-202ENSMUST00000112736 Ighv13-2A0A0A6YWN3 119 aa9.6□□□□□ -0.87
Vps4b-202ENSMUST00000112736 Tcf24V9GWT9 166 aa9.6□□□□□ -0.87
Vps4b-202ENSMUST00000112736 Fn1P11276 2477 aaKnown RBP9.6□□□□□ -0.87
Vps4b-202ENSMUST00000112736 Cdk2ap2Q9CPY4 127 aa9.59□□□□□ -0.87
Vps4b-202ENSMUST00000112736 Ndufa3Q9CQ91 84 aa9.59□□□□□ -0.87
Vps4b-202ENSMUST00000112736 PpdpfQ9CR37 115 aa9.59□□□□□ -0.87
Vps4b-202ENSMUST00000112736 Ndufa1O35683 70 aa9.59□□□□□ -0.87
Vps4b-202ENSMUST00000112736 Dchs1E9PVD3 3291 aa9.59□□□□□ -0.87
Vps4b-202ENSMUST00000112736 Col27a1Q5QNQ9 1845 aa9.59□□□□□ -0.87
Vps4b-202ENSMUST00000112736 Defa7P50705 93 aa9.58□□□□□ -0.88
Vps4b-202ENSMUST00000112736 PrlhG3UWC3 86 aa9.58□□□□□ -0.88
Vps4b-202ENSMUST00000112736 Ramp1Q9WTJ5 148 aa9.58□□□□□ -0.88
Retrieved 100 of 22,080 RNA–protein pairs in 79.4 ms