RNA–Protein interactions for RNA: ENSMUST00000111816.2

Trim71-201, Transcript of E3 ubiquitin-protein ligase TRIM71, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim71, Length 9,332 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim71-201ENSMUST00000111816 Cysrt1Q9D1E4 142 aa14.45□□□□□ -0.1
Trim71-201ENSMUST00000111816 P01791 123 aa14.44□□□□□ -0.1
Trim71-201ENSMUST00000111816 Gata3P23772 443 aa14.44□□□□□ -0.1
Trim71-201ENSMUST00000111816 P04946 108 aa14.44□□□□□ -0.1
Trim71-201ENSMUST00000111816 Lypd6Q8BPP5 171 aa14.44□□□□□ -0.1
Trim71-201ENSMUST00000111816 Gm16503Q8C6M9 103 aa14.44□□□□□ -0.1
Trim71-201ENSMUST00000111816 Mlst8Q9DCJ1 326 aa14.44□□□□□ -0.1
Trim71-201ENSMUST00000111816 Ccl21aP84444 133 aa14.43□□□□□ -0.1
Trim71-201ENSMUST00000111816 Ccl21bP86792 133 aa14.43□□□□□ -0.1
Trim71-201ENSMUST00000111816 Ccl21cP86793 133 aa14.43□□□□□ -0.1
Trim71-201ENSMUST00000111816 Erdr1J3QMM0 206 aa14.43□□□□□ -0.1
Trim71-201ENSMUST00000111816 Gm12689Q8BQU9 117 aa14.43□□□□□ -0.1
Trim71-201ENSMUST00000111816 Lhfpl1Q80SV1 220 aa14.43□□□□□ -0.1
Trim71-201ENSMUST00000111816 Ighv1-50A0A075B5W1 117 aa14.43□□□□□ -0.1
Trim71-201ENSMUST00000111816 Gm17577J3QNF7 156 aa14.43□□□□□ -0.1
Trim71-201ENSMUST00000111816 Ramp1Q9WTJ5 148 aa14.42□□□□□ -0.1
Trim71-201ENSMUST00000111816 Wdr38Q9D994 303 aa14.42□□□□□ -0.1
Trim71-201ENSMUST00000111816 Fam110dQ80X91 271 aa14.42□□□□□ -0.1
Trim71-201ENSMUST00000111816 Igkv1-35A0A0G2JDE5 120 aa14.42□□□□□ -0.1
Trim71-201ENSMUST00000111816 Mrpl35Q9CQL6 188 aa14.41□□□□□ -0.1
Trim71-201ENSMUST00000111816 Ighv1-64A0A075B5X3 117 aa14.41□□□□□ -0.1
Trim71-201ENSMUST00000111816 Inafm1E9PV59 130 aa14.41□□□□□ -0.1
Trim71-201ENSMUST00000111816 UrahQ9CRB3 118 aa14.41□□□□□ -0.1
Trim71-201ENSMUST00000111816 P01745 121 aa14.4□□□□□ -0.1
Trim71-201ENSMUST00000111816 Lmo1Q924W9 156 aa14.4□□□□□ -0.1
Trim71-201ENSMUST00000111816 Gm17521F6QAC8 156 aa14.4□□□□□ -0.1
Trim71-201ENSMUST00000111816 Trav9n-4A0A075B631 113 aa14.4□□□□□ -0.1
Trim71-201ENSMUST00000111816 Colca2F8VPY8 239 aa14.4□□□□□ -0.1
Trim71-201ENSMUST00000111816 Ighv1-19A0A0A6YWX0 117 aa14.39□□□□□ -0.11
Trim71-201ENSMUST00000111816 Fxyd5P97808 178 aa14.39□□□□□ -0.11
Trim71-201ENSMUST00000111816 Trbv16A0A0B4J1H3 115 aa14.39□□□□□ -0.11
Trim71-201ENSMUST00000111816 P06320 134 aa14.39□□□□□ -0.11
Trim71-201ENSMUST00000111816 Tmem223Q9CQE2 199 aaKnown RBP14.39□□□□□ -0.11
Trim71-201ENSMUST00000111816 Gm12253Q5NC48 229 aa14.39□□□□□ -0.11
Trim71-201ENSMUST00000111816 Ypel4Q65Z93 127 aa14.39□□□□□ -0.11
Trim71-201ENSMUST00000111816 Rpl39lQ9CQD0 51 aa14.39□□□□□ -0.11
Trim71-201ENSMUST00000111816 Fam216bQ8CC14 138 aa14.39□□□□□ -0.11
Trim71-201ENSMUST00000111816 A130051J06RikQ8CAU1 227 aa14.38□□□□□ -0.11
Trim71-201ENSMUST00000111816 Tmem210Q9D2F0 147 aa14.38□□□□□ -0.11
Trim71-201ENSMUST00000111816 Atp23Q9CWQ3 201 aa14.38□□□□□ -0.11
Trim71-201ENSMUST00000111816 Ankhd1E9PUR0 2548 aaKnown RBP14.38□□□□□ -0.11
Trim71-201ENSMUST00000111816 Trav9d-3A0A075B695 113 aa14.37□□□□□ -0.11
Trim71-201ENSMUST00000111816 Ighv1-4A0A075B5T4 117 aa14.37□□□□□ -0.11
Trim71-201ENSMUST00000111816 P01792 123 aa14.37□□□□□ -0.11
Trim71-201ENSMUST00000111816 P01789 122 aa14.36□□□□□ -0.11
Trim71-201ENSMUST00000111816 ElnP54320 860 aa14.36□□□□□ -0.11
Trim71-201ENSMUST00000111816 Ighv1-74A0A0G2JGK2 117 aa14.36□□□□□ -0.11
Trim71-201ENSMUST00000111816 Gm10401E9Q3K6 71 aa14.36□□□□□ -0.11
Trim71-201ENSMUST00000111816 Znrd1Q791N7 123 aa14.36□□□□□ -0.11
Trim71-201ENSMUST00000111816 Cox8cA6H666 72 aa14.36□□□□□ -0.11
Trim71-201ENSMUST00000111816 Fancd2osQ9D4K4 178 aa14.36□□□□□ -0.11
Trim71-201ENSMUST00000111816 Eif4ebp1Q60876 117 aa14.36□□□□□ -0.11
Trim71-201ENSMUST00000111816 Tm2d1Q99MB3 208 aa14.35□□□□□ -0.11
Trim71-201ENSMUST00000111816 Iglv1A0A075B663 117 aa14.35□□□□□ -0.11
Trim71-201ENSMUST00000111816 Odf1Q61999 247 aa14.35□□□□□ -0.11
Trim71-201ENSMUST00000111816 Odf3l1Q810P2 275 aa14.35□□□□□ -0.11
Trim71-201ENSMUST00000111816 BaalcQ8VHV1 145 aa14.35□□□□□ -0.11
Trim71-201ENSMUST00000111816 NrtnP97463 195 aa14.34□□□□□ -0.11
Trim71-201ENSMUST00000111816 Q8K1L6 76 aa14.34□□□□□ -0.11
Trim71-201ENSMUST00000111816 P01649 108 aa14.34□□□□□ -0.11
Trim71-201ENSMUST00000111816 Cela2aP05208 271 aa14.34□□□□□ -0.11
Trim71-201ENSMUST00000111816 Col24a1Q30D77 1733 aa14.34□□□□□ -0.11
Trim71-201ENSMUST00000111816 MtorQ9JLN9 2549 aa14.34□□□□□ -0.11
Trim71-201ENSMUST00000111816 1500011B03RikQ3TTH7 73 aa14.34□□□□□ -0.11
Trim71-201ENSMUST00000111816 P0C913 63 aa14.34□□□□□ -0.11
Trim71-201ENSMUST00000111816 Csrp1P97315 193 aaKnown RBP14.33□□□□□ -0.11
Trim71-201ENSMUST00000111816 Prp2P05143 317 aa14.33□□□□□ -0.12
Trim71-201ENSMUST00000111816 C1qcQ02105 246 aa14.33□□□□□ -0.12
Trim71-201ENSMUST00000111816 Igkv8-30A0A140T8M3 121 aa14.32□□□□□ -0.12
Trim71-201ENSMUST00000111816 Gm14137Q8CE97 175 aa14.32□□□□□ -0.12
Trim71-201ENSMUST00000111816 Edn3P48299 214 aa14.32□□□□□ -0.12
Trim71-201ENSMUST00000111816 ColqO35348 457 aa14.32□□□□□ -0.12
Trim71-201ENSMUST00000111816 Igkv3-12A0A140T8P0 119 aa14.32□□□□□ -0.12
Trim71-201ENSMUST00000111816 Cox7bP56393 80 aa14.32□□□□□ -0.12
Trim71-201ENSMUST00000111816 Gm10192Q3V0S1 108 aa14.32□□□□□ -0.12
Trim71-201ENSMUST00000111816 Apoc4Q61268 124 aa14.32□□□□□ -0.12
Trim71-201ENSMUST00000111816 Fam19a5Q91WE9 132 aa14.31□□□□□ -0.12
Trim71-201ENSMUST00000111816 Cd24P24807 76 aa14.31□□□□□ -0.12
Trim71-201ENSMUST00000111816 1700084M14RikB1AT01 78 aa14.31□□□□□ -0.12
Trim71-201ENSMUST00000111816 Prh1P05142 261 aa14.31□□□□□ -0.12
Trim71-201ENSMUST00000111816 Zc2hc1aQ8BJH1 324 aa14.3□□□□□ -0.12
Trim71-201ENSMUST00000111816 Smrp1Q2MH31 260 aa14.3□□□□□ -0.12
Trim71-201ENSMUST00000111816 Cfap126Q6P8X9 189 aa14.3□□□□□ -0.12
Trim71-201ENSMUST00000111816 Csdc2Q91YQ3 154 aa14.3□□□□□ -0.12
Trim71-201ENSMUST00000111816 Col5a3Q9JLI2 1739 aa14.3□□□□□ -0.12
Trim71-201ENSMUST00000111816 Reg3bP35230 175 aa14.29□□□□□ -0.12
Trim71-201ENSMUST00000111816 Cd27P41272 250 aa14.29□□□□□ -0.12
Trim71-201ENSMUST00000111816 Ighv1-77A0A0G2JGS9 117 aa14.29□□□□□ -0.12
Trim71-201ENSMUST00000111816 Gm44973A0A140LJJ1 189 aa14.29□□□□□ -0.12
Trim71-201ENSMUST00000111816 Tcl1b3P56842 122 aa14.29□□□□□ -0.12
Trim71-201ENSMUST00000111816 Q9DAQ5 155 aa14.29□□□□□ -0.12
Trim71-201ENSMUST00000111816 Gm10384Q3UQ87 92 aa14.29□□□□□ -0.12
Trim71-201ENSMUST00000111816 Gm42674D3YUT9 64 aa14.29□□□□□ -0.12
Trim71-201ENSMUST00000111816 Setd2E9Q5F9 2537 aa14.29□□□□□ -0.12
Trim71-201ENSMUST00000111816 Ighv2-6A0A075B6A7 116 aa14.28□□□□□ -0.12
Trim71-201ENSMUST00000111816 Ebi3O35228 228 aa14.28□□□□□ -0.12
Trim71-201ENSMUST00000111816 Ighv5-8A0A075B676 92 aa14.28□□□□□ -0.12
Trim71-201ENSMUST00000111816 Sh2d1aO88890 126 aa14.28□□□□□ -0.12
Trim71-201ENSMUST00000111816 P01658 132 aa14.27□□□□□ -0.13
Trim71-201ENSMUST00000111816 Q80X32 188 aaKnown RBP14.27□□□□□ -0.13
Retrieved 100 of 22,080 RNA–protein pairs in 96.9 ms