RNA–Protein interactions for RNA: ENSMUST00000109546.8

Vcan-203, Transcript of Versican core protein, mousemouse

TSL 1 (best) BASIC

Gene Vcan, Length 12,427 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vcan-203ENSMUST00000109546 Ighv3-6P18531 116 aa4.77□□□□□ -1.65
Vcan-203ENSMUST00000109546 Igkv8-30A0A140T8M3 121 aa4.77□□□□□ -1.65
Vcan-203ENSMUST00000109546 P01729 129 aa4.77□□□□□ -1.65
Vcan-203ENSMUST00000109546 Gm21976J3QNN2 249 aa4.76□□□□□ -1.65
Vcan-203ENSMUST00000109546 IappP12968 93 aa4.76□□□□□ -1.65
Vcan-203ENSMUST00000109546 Pate4Q09098 99 aa4.76□□□□□ -1.65
Vcan-203ENSMUST00000109546 P01638 115 aa4.76□□□□□ -1.65
Vcan-203ENSMUST00000109546 P01789 122 aa4.76□□□□□ -1.65
Vcan-203ENSMUST00000109546 Defb5Q9EPV9 64 aa4.76□□□□□ -1.65
Vcan-203ENSMUST00000109546 Gm17359A0A0G2JEB7 487 aa4.76□□□□□ -1.65
Vcan-203ENSMUST00000109546 Cxcl13O55038 109 aa4.76□□□□□ -1.65
Vcan-203ENSMUST00000109546 Gm10577Q3UDV9 132 aa4.76□□□□□ -1.65
Vcan-203ENSMUST00000109546 Fam216bQ8CC14 138 aa4.76□□□□□ -1.65
Vcan-203ENSMUST00000109546 Cdpf1Q8R3A2 119 aa4.76□□□□□ -1.65
Vcan-203ENSMUST00000109546 Trav9-4A0A0B4J1K2 113 aa4.76□□□□□ -1.65
Vcan-203ENSMUST00000109546 Igkv1-35A0A0G2JDE5 120 aa4.76□□□□□ -1.65
Vcan-203ENSMUST00000109546 Gp9O88186 177 aa4.76□□□□□ -1.65
Vcan-203ENSMUST00000109546 Inafm1E9PV59 130 aa4.76□□□□□ -1.65
Vcan-203ENSMUST00000109546 P01649 108 aa4.76□□□□□ -1.65
Vcan-203ENSMUST00000109546 Trav9-2A0A075B647 113 aa4.75□□□□□ -1.65
Vcan-203ENSMUST00000109546 Trav9n-2A0A0G2JDP3 113 aa4.75□□□□□ -1.65
Vcan-203ENSMUST00000109546 Gm12216A0A1W2P827 62 aa4.75□□□□□ -1.65
Vcan-203ENSMUST00000109546 PrcdQ00LT2 53 aa4.75□□□□□ -1.65
Vcan-203ENSMUST00000109546 Ighv1-77A0A0G2JGS9 117 aa4.75□□□□□ -1.65
Vcan-203ENSMUST00000109546 P01787 123 aa4.75□□□□□ -1.65
Vcan-203ENSMUST00000109546 P01788 123 aa4.75□□□□□ -1.65
Vcan-203ENSMUST00000109546 P01791 123 aa4.75□□□□□ -1.65
Vcan-203ENSMUST00000109546 Q80X32 188 aaKnown RBP4.75□□□□□ -1.65
Vcan-203ENSMUST00000109546 Atp6v0e1Q9CQD8 81 aa4.75□□□□□ -1.65
Vcan-203ENSMUST00000109546 Tm2d1Q99MB3 208 aa4.75□□□□□ -1.65
Vcan-203ENSMUST00000109546 Obsl1D3YYU8 1804 aaKnown RBP4.75□□□□□ -1.65
Vcan-203ENSMUST00000109546 9430015G10RikA2ASP7 199 aa4.75□□□□□ -1.65
Vcan-203ENSMUST00000109546 Mp68P56379 58 aa4.75□□□□□ -1.65
Vcan-203ENSMUST00000109546 Sslp1Q3UN54 99 aa4.75□□□□□ -1.65
Vcan-203ENSMUST00000109546 Ccl6P27784 116 aa4.75□□□□□ -1.65
Vcan-203ENSMUST00000109546 Pip4p1Q3TWL2 284 aa4.75□□□□□ -1.65
Vcan-203ENSMUST00000109546 Cr2P19070 1025 aa4.75□□□□□ -1.65
Vcan-203ENSMUST00000109546 Smr3aQ61900 147 aa4.75□□□□□ -1.65
Vcan-203ENSMUST00000109546 Reg4Q9D8G5 157 aa4.74□□□□□ -1.65
Vcan-203ENSMUST00000109546 PtprfA2A8L5 1898 aa4.74□□□□□ -1.65
Vcan-203ENSMUST00000109546 Snai3Q9QY31 287 aa4.74□□□□□ -1.65
Vcan-203ENSMUST00000109546 Gm21994F6T2D2 329 aa4.74□□□□□ -1.65
Vcan-203ENSMUST00000109546 Ighv12-3A0A075B5T1 117 aa4.74□□□□□ -1.65
Vcan-203ENSMUST00000109546 Trav9d-3A0A075B695 113 aa4.74□□□□□ -1.65
Vcan-203ENSMUST00000109546 Zdbf2Q5SS00 2493 aaKnown RBP4.74□□□□□ -1.65
Vcan-203ENSMUST00000109546 P01745 121 aa4.74□□□□□ -1.65
Vcan-203ENSMUST00000109546 P18532 116 aa4.74□□□□□ -1.65
Vcan-203ENSMUST00000109546 RetnlbQ99P86 105 aa4.74□□□□□ -1.65
Vcan-203ENSMUST00000109546 Gm19345G3UYD9 124 aa4.74□□□□□ -1.65
Vcan-203ENSMUST00000109546 Col18a1P39061 1774 aa4.74□□□□□ -1.65
Vcan-203ENSMUST00000109546 Defb4P82019 63 aa4.74□□□□□ -1.65
Vcan-203ENSMUST00000109546 Gm6899Q3USS0 134 aa4.74□□□□□ -1.65
Vcan-203ENSMUST00000109546 Iglv1A0A075B663 117 aa4.74□□□□□ -1.65
Vcan-203ENSMUST00000109546 Nop10Q9CQS2 64 aa4.73□□□□□ -1.65
Vcan-203ENSMUST00000109546 Q9DAQ5 155 aa4.73□□□□□ -1.65
Vcan-203ENSMUST00000109546 A230072I06RikQ3UUJ8 172 aa4.73□□□□□ -1.65
Vcan-203ENSMUST00000109546 PtprbB2RU80 1998 aa4.73□□□□□ -1.65
Vcan-203ENSMUST00000109546 Igkv1-88A0A140T8N1 120 aa4.73□□□□□ -1.65
Vcan-203ENSMUST00000109546 Rnf144bQ8BKD6 301 aa4.73□□□□□ -1.65
Vcan-203ENSMUST00000109546 PpdpfQ9CR37 115 aa4.73□□□□□ -1.65
Vcan-203ENSMUST00000109546 P01792 123 aa4.73□□□□□ -1.65
Vcan-203ENSMUST00000109546 Gm5468Q8C3D3 155 aa4.73□□□□□ -1.65
Vcan-203ENSMUST00000109546 Triap1Q9D8Z2 76 aa4.73□□□□□ -1.65
Vcan-203ENSMUST00000109546 Ighv1-85A0A075B5Y6 117 aa4.73□□□□□ -1.65
Vcan-203ENSMUST00000109546 P04946 108 aa4.72□□□□□ -1.65
Vcan-203ENSMUST00000109546 Gm9887F6RFI0 207 aa4.72□□□□□ -1.65
Vcan-203ENSMUST00000109546 Fstl3Q9EQC7 256 aa4.72□□□□□ -1.65
Vcan-203ENSMUST00000109546 Plac8l1Q08EJ0 177 aa4.72□□□□□ -1.65
Vcan-203ENSMUST00000109546 D730048I06RikQ9CQB8 106 aa4.72□□□□□ -1.65
Vcan-203ENSMUST00000109546 Vopp1Q8R1C3 172 aa4.72□□□□□ -1.65
Vcan-203ENSMUST00000109546 Spint4Q9D263 159 aa4.72□□□□□ -1.65
Vcan-203ENSMUST00000109546 Igkv3-12A0A140T8P0 119 aa4.72□□□□□ -1.65
Vcan-203ENSMUST00000109546 Reg3gO09049 174 aa4.72□□□□□ -1.65
Vcan-203ENSMUST00000109546 OtoglF7A4A7 2325 aa4.72□□□□□ -1.65
Vcan-203ENSMUST00000109546 Col11a2Q64739 1736 aa4.72□□□□□ -1.65
Vcan-203ENSMUST00000109546 Sprr2jO70561 109 aa4.72□□□□□ -1.65
Vcan-203ENSMUST00000109546 AmelxP63277 210 aa4.72□□□□□ -1.65
Vcan-203ENSMUST00000109546 Fgf23Q9EPC2 251 aa4.72□□□□□ -1.65
Vcan-203ENSMUST00000109546 Gm9805F6YK59 57 aa4.72□□□□□ -1.65
Vcan-203ENSMUST00000109546 Ighv1-82A0A0G2JEU7 117 aa4.71□□□□□ -1.65
Vcan-203ENSMUST00000109546 Igkv1-117A0A140T8M0 119 aa4.71□□□□□ -1.65
Vcan-203ENSMUST00000109546 TeppQ6IMH0 216 aa4.71□□□□□ -1.65
Vcan-203ENSMUST00000109546 Ighv1-4A0A075B5T4 117 aa4.71□□□□□ -1.66
Vcan-203ENSMUST00000109546 Gm42674D3YUT9 64 aa4.71□□□□□ -1.66
Vcan-203ENSMUST00000109546 Eif4ebp3Q80VV3 101 aa4.71□□□□□ -1.66
Vcan-203ENSMUST00000109546 Rpl28P41105 137 aaKnown RBP4.71□□□□□ -1.66
Vcan-203ENSMUST00000109546 Gm9881Q8BR56 211 aa4.71□□□□□ -1.66
Vcan-203ENSMUST00000109546 Ighv1-74A0A0G2JGK2 117 aa4.71□□□□□ -1.66
Vcan-203ENSMUST00000109546 Cd27P41272 250 aa4.71□□□□□ -1.66
Vcan-203ENSMUST00000109546 Rai1Q61818 1889 aa4.71□□□□□ -1.66
Vcan-203ENSMUST00000109546 5730596B20RikQ8BQ08 205 aa4.71□□□□□ -1.66
Vcan-203ENSMUST00000109546 Smr2O09133 150 aa4.71□□□□□ -1.66
Vcan-203ENSMUST00000109546 Sh2d1aO88890 126 aa4.71□□□□□ -1.66
Vcan-203ENSMUST00000109546 AW146154Q3TPQ7 468 aa4.71□□□□□ -1.66
Vcan-203ENSMUST00000109546 4930564D02RikQ9D4S4 103 aa4.71□□□□□ -1.66
Vcan-203ENSMUST00000109546 3110021N24RikJ3QMN2 152 aa4.71□□□□□ -1.66
Vcan-203ENSMUST00000109546 P01658 132 aa4.71□□□□□ -1.66
Vcan-203ENSMUST00000109546 Prr3Q811B5 190 aaKnown RBP4.7□□□□□ -1.66
Vcan-203ENSMUST00000109546 LctF8VPT3 1931 aa4.7□□□□□ -1.66
Vcan-203ENSMUST00000109546 Ebi3O35228 228 aa4.7□□□□□ -1.66
Retrieved 100 of 22,080 RNA–protein pairs in 60.7 ms