RNA–Protein interactions for RNA: ENSMUST00000086923.5

Col17a1-202, Transcript of Collagen alpha-1(XVII) chain, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Col17a1, Length 5,477 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1-202ENSMUST00000086923 1520401A03RikA0A0J9YVH6 598 aa12.56□□□□□ -0.4
Col17a1-202ENSMUST00000086923 Zc2hc1bQ9D534 172 aa12.56□□□□□ -0.4
Col17a1-202ENSMUST00000086923 Fam208bQ5DTT3 2382 aa12.56□□□□□ -0.4
Col17a1-202ENSMUST00000086923 Vpreb3D3Z6J4 130 aa12.55□□□□□ -0.4
Col17a1-202ENSMUST00000086923 Gm4861Q8C5A4 106 aa12.55□□□□□ -0.4
Col17a1-202ENSMUST00000086923 Rnf185Q91YT2 192 aa12.55□□□□□ -0.4
Col17a1-202ENSMUST00000086923 Gm20708H3BKF4 155 aa12.55□□□□□ -0.4
Col17a1-202ENSMUST00000086923 Gm9949Q8C9F4 104 aa12.55□□□□□ -0.4
Col17a1-202ENSMUST00000086923 Sp5Q9JHX2 398 aa12.55□□□□□ -0.4
Col17a1-202ENSMUST00000086923 Odf1Q61999 247 aa12.55□□□□□ -0.4
Col17a1-202ENSMUST00000086923 Spink13Q3UTS8 97 aa12.55□□□□□ -0.4
Col17a1-202ENSMUST00000086923 CadB2RQC6 2225 aa12.54□□□□□ -0.4
Col17a1-202ENSMUST00000086923 Trav9d-3A0A075B695 113 aa12.54□□□□□ -0.4
Col17a1-202ENSMUST00000086923 Trav13d-4A0A0G2JFX3 110 aa12.54□□□□□ -0.4
Col17a1-202ENSMUST00000086923 Rnf114Q9ET26 229 aa12.54□□□□□ -0.4
Col17a1-202ENSMUST00000086923 Adamts9E9PUN6 1931 aa12.54□□□□□ -0.4
Col17a1-202ENSMUST00000086923 Reg3gO09049 174 aa12.54□□□□□ -0.4
Col17a1-202ENSMUST00000086923 Atox1O08997 68 aaKnown RBP12.53□□□□□ -0.4
Col17a1-202ENSMUST00000086923 5730596B20RikQ8BQ08 205 aa12.53□□□□□ -0.4
Col17a1-202ENSMUST00000086923 Pgpep1lQ9CWB5 130 aa12.53□□□□□ -0.4
Col17a1-202ENSMUST00000086923 Abca4O35600 2310 aa12.53□□□□□ -0.4
Col17a1-202ENSMUST00000086923 Trav9n-2A0A0G2JDP3 113 aa12.53□□□□□ -0.4
Col17a1-202ENSMUST00000086923 Ebi3O35228 228 aa12.53□□□□□ -0.4
Col17a1-202ENSMUST00000086923 BaalcQ8VHV1 145 aa12.53□□□□□ -0.4
Col17a1-202ENSMUST00000086923 Col6a4A2AX52 2309 aa12.53□□□□□ -0.4
Col17a1-202ENSMUST00000086923 Ighv1-11A0A0A6YWI9 117 aa12.53□□□□□ -0.4
Col17a1-202ENSMUST00000086923 Cyyr1Q8VIH7 165 aa12.53□□□□□ -0.4
Col17a1-202ENSMUST00000086923 Ighv1-4A0A075B5T4 117 aa12.52□□□□□ -0.4
Col17a1-202ENSMUST00000086923 Ube2d3P61079 147 aa12.52□□□□□ -0.4
Col17a1-202ENSMUST00000086923 Ube2d2P62838 147 aa12.52□□□□□ -0.4
Col17a1-202ENSMUST00000086923 Prop1P97458 223 aa12.52□□□□□ -0.4
Col17a1-202ENSMUST00000086923 Gm12253Q5NC48 229 aa12.52□□□□□ -0.4
Col17a1-202ENSMUST00000086923 Trav13-4-dv7A0A075B6C2 110 aa12.52□□□□□ -0.4
Col17a1-202ENSMUST00000086923 1700084M14RikB1AT01 78 aa12.52□□□□□ -0.4
Col17a1-202ENSMUST00000086923 LctF8VPT3 1931 aa12.51□□□□□ -0.41
Col17a1-202ENSMUST00000086923 Prh1P05142 261 aa12.51□□□□□ -0.41
Col17a1-202ENSMUST00000086923 Apoc4Q61268 124 aa12.51□□□□□ -0.41
Col17a1-202ENSMUST00000086923 FcorP0DJI6 106 aa12.51□□□□□ -0.41
Col17a1-202ENSMUST00000086923 Ube2d4D3YUH6 135 aa12.51□□□□□ -0.41
Col17a1-202ENSMUST00000086923 Scn10aQ6QIY3 1958 aa12.5□□□□□ -0.41
Col17a1-202ENSMUST00000086923 Mrps21P58059 87 aa12.5□□□□□ -0.41
Col17a1-202ENSMUST00000086923 Ube2d1P61080 147 aaKnown RBP12.5□□□□□ -0.41
Col17a1-202ENSMUST00000086923 Gm10192Q3V0S1 108 aa12.5□□□□□ -0.41
Col17a1-202ENSMUST00000086923 Ighv12-3A0A075B5T1 117 aa12.5□□□□□ -0.41
Col17a1-202ENSMUST00000086923 Ighv1-61P01749 117 aa12.5□□□□□ -0.41
Col17a1-202ENSMUST00000086923 Alms1Q8K4E0 3251 aa12.5□□□□□ -0.41
Col17a1-202ENSMUST00000086923 Plxna2P70207 1894 aa12.5□□□□□ -0.41
Col17a1-202ENSMUST00000086923 ArtnQ9Z0L2 224 aa12.49□□□□□ -0.41
Col17a1-202ENSMUST00000086923 SnurfQ9WU12 71 aa12.49□□□□□ -0.41
Col17a1-202ENSMUST00000086923 Tmem223Q9CQE2 199 aaKnown RBP12.48□□□□□ -0.41
Col17a1-202ENSMUST00000086923 P01725 110 aa12.48□□□□□ -0.41
Col17a1-202ENSMUST00000086923 Ighv1-12A0A0A6YXJ9 117 aa12.48□□□□□ -0.41
Col17a1-202ENSMUST00000086923 Wfdc15bQ9JHY4 80 aa12.48□□□□□ -0.41
Col17a1-202ENSMUST00000086923 Plxnd1Q3UH93 1925 aa12.48□□□□□ -0.41
Col17a1-202ENSMUST00000086923 P06320 134 aa12.48□□□□□ -0.41
Col17a1-202ENSMUST00000086923 Anapc1P53995 1944 aaKnown RBP12.48□□□□□ -0.41
Col17a1-202ENSMUST00000086923 Ighv3-4A0A0A6YXF1 117 aa12.48□□□□□ -0.41
Col17a1-202ENSMUST00000086923 9230109A22RikQ8BHE6 111 aa12.48□□□□□ -0.41
Col17a1-202ENSMUST00000086923 Nop10Q9CQS2 64 aa12.48□□□□□ -0.41
Col17a1-202ENSMUST00000086923 Ighv13-2A0A0A6YWN3 119 aa12.47□□□□□ -0.41
Col17a1-202ENSMUST00000086923 PtprsB0V2N1 1907 aa12.47□□□□□ -0.41
Col17a1-202ENSMUST00000086923 Ube2bP63147 152 aa12.46□□□□□ -0.41
Col17a1-202ENSMUST00000086923 P04943 107 aa12.46□□□□□ -0.41
Col17a1-202ENSMUST00000086923 Cela2aP05208 271 aa12.46□□□□□ -0.41
Col17a1-202ENSMUST00000086923 P06328 117 aa12.46□□□□□ -0.42
Col17a1-202ENSMUST00000086923 Ndufb1P0DN34 57 aa12.46□□□□□ -0.42
Col17a1-202ENSMUST00000086923 Igkv1-88A0A140T8N1 120 aa12.45□□□□□ -0.42
Col17a1-202ENSMUST00000086923 AW146154Q3TPQ7 468 aa12.45□□□□□ -0.42
Col17a1-202ENSMUST00000086923 Rp1l1Q8CGM2 1859 aa12.45□□□□□ -0.42
Col17a1-202ENSMUST00000086923 Map6d1Q14BB9 191 aa12.45□□□□□ -0.42
Col17a1-202ENSMUST00000086923 9430015G10RikA2ASP7 199 aa12.45□□□□□ -0.42
Col17a1-202ENSMUST00000086923 Dazap2Q9DCP9 168 aa12.45□□□□□ -0.42
Col17a1-202ENSMUST00000086923 SrarpQ3ULG3 163 aa12.44□□□□□ -0.42
Col17a1-202ENSMUST00000086923 Fancd2osQ9D4K4 178 aa12.44□□□□□ -0.42
Col17a1-202ENSMUST00000086923 Znf239P24399 201 aa12.44□□□□□ -0.42
Col17a1-202ENSMUST00000086923 Atg2aQ6P4T0 1914 aa12.44□□□□□ -0.42
Col17a1-202ENSMUST00000086923 Trav9-2A0A075B647 113 aa12.44□□□□□ -0.42
Col17a1-202ENSMUST00000086923 Trav9-4A0A0B4J1K2 113 aa12.44□□□□□ -0.42
Col17a1-202ENSMUST00000086923 Cox7a1P56392 80 aa12.43□□□□□ -0.42
Col17a1-202ENSMUST00000086923 Ly6g6dQ9Z1Q3 135 aa12.43□□□□□ -0.42
Col17a1-202ENSMUST00000086923 Cep295Q8BQ48 2412 aa12.43□□□□□ -0.42
Col17a1-202ENSMUST00000086923 Hoxb4P10284 250 aa12.43□□□□□ -0.42
Col17a1-202ENSMUST00000086923 Gm37389A0A0A6YW05 95 aa12.43□□□□□ -0.42
Col17a1-202ENSMUST00000086923 9530003J23RikQ8BM26 151 aa12.42□□□□□ -0.42
Col17a1-202ENSMUST00000086923 Prr13Q9CQJ5 137 aa12.42□□□□□ -0.42
Col17a1-202ENSMUST00000086923 4930470P17RikQ9D542 155 aa12.42□□□□□ -0.42
Col17a1-202ENSMUST00000086923 Tanc2A2A690 1994 aa12.42□□□□□ -0.42
Col17a1-202ENSMUST00000086923 Bdp1Q571C7 2467 aa12.42□□□□□ -0.42
Col17a1-202ENSMUST00000086923 Gm12353A2AGJ4 60 aa12.41□□□□□ -0.42
Col17a1-202ENSMUST00000086923 Tfpi2O35536 230 aa12.41□□□□□ -0.42
Col17a1-202ENSMUST00000086923 Nckap5E9QAE1 1909 aa12.41□□□□□ -0.42
Col17a1-202ENSMUST00000086923 AcacaQ5SWU9 2345 aa12.41□□□□□ -0.42
Col17a1-202ENSMUST00000086923 H2al1mQ9DAD9 105 aa12.41□□□□□ -0.42
Col17a1-202ENSMUST00000086923 CdsnQ7TPC1 561 aa12.41□□□□□ -0.42
Col17a1-202ENSMUST00000086923 Ube2aQ9Z255 152 aa12.41□□□□□ -0.42
Col17a1-202ENSMUST00000086923 Tcte2E9PY37 120 aa12.41□□□□□ -0.42
Col17a1-202ENSMUST00000086923 Gm10135F6TEE5 83 aa12.41□□□□□ -0.42
Col17a1-202ENSMUST00000086923 Igkv8-26A0A075B5N5 123 aa12.41□□□□□ -0.42
Col17a1-202ENSMUST00000086923 Eml6Q5SQM0 1958 aa12.4□□□□□ -0.42
Col17a1-202ENSMUST00000086923 P01748 117 aa12.4□□□□□ -0.42
Retrieved 100 of 22,080 RNA–protein pairs in 43.4 ms