RNA–Protein interactions for RNA: ENSMUST00000042534.14

Ccdc85a-201, Transcript of Coiled-coil domain-containing protein 85A, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ccdc85a, Length 5,332 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc85a-201ENSMUST00000042534 Trav13n-1A0A0G2JEU8 110 aa10.65□□□□□ -0.7
Ccdc85a-201ENSMUST00000042534 Lypd6Q8BPP5 171 aa10.65□□□□□ -0.7
Ccdc85a-201ENSMUST00000042534 Zc2hc1bQ9D534 172 aa10.65□□□□□ -0.7
Ccdc85a-201ENSMUST00000042534 Lmo4P61969 165 aa10.65□□□□□ -0.7
Ccdc85a-201ENSMUST00000042534 Trav7-6A0A075B640 112 aa10.65□□□□□ -0.7
Ccdc85a-201ENSMUST00000042534 Igkv4-74A0A0B4J1I3 119 aa10.65□□□□□ -0.7
Ccdc85a-201ENSMUST00000042534 PpdpfQ9CR37 115 aa10.65□□□□□ -0.7
Ccdc85a-201ENSMUST00000042534 Prpf8Q99PV0 2335 aaKnown RBP10.65□□□□□ -0.71
Ccdc85a-201ENSMUST00000042534 Znf239P24399 201 aa10.65□□□□□ -0.71
Ccdc85a-201ENSMUST00000042534 P01745 121 aa10.64□□□□□ -0.71
Ccdc85a-201ENSMUST00000042534 Rnase1P00683 149 aa10.64□□□□□ -0.71
Ccdc85a-201ENSMUST00000042534 CtrlQ9ER05 264 aa10.64□□□□□ -0.71
Ccdc85a-201ENSMUST00000042534 Tcte2E9PY37 120 aa10.64□□□□□ -0.71
Ccdc85a-201ENSMUST00000042534 Tmem258P61166 79 aa10.64□□□□□ -0.71
Ccdc85a-201ENSMUST00000042534 Tmem213Q08EA8 116 aa10.64□□□□□ -0.71
Ccdc85a-201ENSMUST00000042534 Trav13d-1A0A075B606 110 aa10.63□□□□□ -0.71
Ccdc85a-201ENSMUST00000042534 Ppp1r32Q148A4 427 aa10.63□□□□□ -0.71
Ccdc85a-201ENSMUST00000042534 Tet2Q4JK59 1912 aaKnown RBP10.63□□□□□ -0.71
Ccdc85a-201ENSMUST00000042534 Gm6899Q3USS0 134 aa10.63□□□□□ -0.71
Ccdc85a-201ENSMUST00000042534 Ncor2Q9WU42 2472 aaKnown RBP10.63□□□□□ -0.71
Ccdc85a-201ENSMUST00000042534 Gm10518F6UQQ9 182 aa10.63□□□□□ -0.71
Ccdc85a-201ENSMUST00000042534 Trav13d-4A0A0G2JFX3 110 aa10.63□□□□□ -0.71
Ccdc85a-201ENSMUST00000042534 Wdr90Q6ZPG2 1874 aa10.62□□□□□ -0.71
Ccdc85a-201ENSMUST00000042534 Usf3B2RUQ2 2221 aa10.62□□□□□ -0.71
Ccdc85a-201ENSMUST00000042534 Sec16aA2AIX1 2377 aa10.62□□□□□ -0.71
Ccdc85a-201ENSMUST00000042534 Ncoa6Q9JL19 2067 aa10.62□□□□□ -0.71
Ccdc85a-201ENSMUST00000042534 Cox7b2Q9D2H1 82 aa10.62□□□□□ -0.71
Ccdc85a-201ENSMUST00000042534 4930470P17RikQ9D542 155 aa10.62□□□□□ -0.71
Ccdc85a-201ENSMUST00000042534 Cryba4Q9JJV0 196 aa10.62□□□□□ -0.71
Ccdc85a-201ENSMUST00000042534 E130116L18RikQ8BMV6 101 aa10.61□□□□□ -0.71
Ccdc85a-201ENSMUST00000042534 Gm44965A0A0N4SVR3 59 aa10.61□□□□□ -0.71
Ccdc85a-201ENSMUST00000042534 BC107364E9Q5A2 140 aa10.61□□□□□ -0.71
Ccdc85a-201ENSMUST00000042534 AgrnA2ASQ1 1950 aa10.61□□□□□ -0.71
Ccdc85a-201ENSMUST00000042534 Arfgef3Q3UGY8 2170 aa10.61□□□□□ -0.71
Ccdc85a-201ENSMUST00000042534 Igkv4-58A0A0G2JGI6 119 aa10.61□□□□□ -0.71
Ccdc85a-201ENSMUST00000042534 Rbm3O89086 153 aaKnown RBP10.6□□□□□ -0.71
Ccdc85a-201ENSMUST00000042534 P01747 120 aa10.6□□□□□ -0.71
Ccdc85a-201ENSMUST00000042534 MifP34884 115 aaKnown RBP10.6□□□□□ -0.71
Ccdc85a-201ENSMUST00000042534 Triap1Q9D8Z2 76 aa10.6□□□□□ -0.71
Ccdc85a-201ENSMUST00000042534 Gm20726G3UX18 150 aa10.6□□□□□ -0.71
Ccdc85a-201ENSMUST00000042534 P84751 237 aa10.6□□□□□ -0.71
Ccdc85a-201ENSMUST00000042534 A130051J06RikQ8CAU1 227 aa10.6□□□□□ -0.71
Ccdc85a-201ENSMUST00000042534 Igkv1-122A0A140T8M9 119 aa10.6□□□□□ -0.71
Ccdc85a-201ENSMUST00000042534 Gm12689Q8BQU9 117 aa10.6□□□□□ -0.71
Ccdc85a-201ENSMUST00000042534 Gm5629P06327 117 aa10.6□□□□□ -0.71
Ccdc85a-201ENSMUST00000042534 Fgf6P21658 208 aa10.6□□□□□ -0.71
Ccdc85a-201ENSMUST00000042534 Rnf185Q91YT2 192 aa10.59□□□□□ -0.71
Ccdc85a-201ENSMUST00000042534 Ighv1-85A0A075B5Y6 117 aa10.59□□□□□ -0.71
Ccdc85a-201ENSMUST00000042534 Gm17472A0A075B683 117 aa10.59□□□□□ -0.71
Ccdc85a-201ENSMUST00000042534 Ube2bP63147 152 aa10.59□□□□□ -0.71
Ccdc85a-201ENSMUST00000042534 CenpeQ6RT24 2474 aaKnown RBP10.59□□□□□ -0.71
Ccdc85a-201ENSMUST00000042534 Fer1l4A3KGK3 1992 aa10.59□□□□□ -0.71
Ccdc85a-201ENSMUST00000042534 Ucn2Q99ML8 113 aa10.58□□□□□ -0.72
Ccdc85a-201ENSMUST00000042534 Gm10542F6XDR3 90 aa10.58□□□□□ -0.72
Ccdc85a-201ENSMUST00000042534 Dkk4Q8VEJ3 221 aa10.58□□□□□ -0.72
Ccdc85a-201ENSMUST00000042534 Pde6gP09174 87 aa10.58□□□□□ -0.72
Ccdc85a-201ENSMUST00000042534 Eml6Q5SQM0 1958 aa10.58□□□□□ -0.72
Ccdc85a-201ENSMUST00000042534 4930546C10RikE9Q4Y3 121 aa10.57□□□□□ -0.72
Ccdc85a-201ENSMUST00000042534 Prh1P05142 261 aa10.57□□□□□ -0.72
Ccdc85a-201ENSMUST00000042534 Ighv1-61P01749 117 aa10.57□□□□□ -0.72
Ccdc85a-201ENSMUST00000042534 Camk2n2Q78WH7 79 aa10.57□□□□□ -0.72
Ccdc85a-201ENSMUST00000042534 Notch4P31695 1964 aa10.57□□□□□ -0.72
Ccdc85a-201ENSMUST00000042534 Trav13-4-dv7A0A075B6C2 110 aa10.56□□□□□ -0.72
Ccdc85a-201ENSMUST00000042534 Ormdl1Q921I0 153 aa10.56□□□□□ -0.72
Ccdc85a-201ENSMUST00000042534 Gm12353A2AGJ4 60 aa10.56□□□□□ -0.72
Ccdc85a-201ENSMUST00000042534 Fgfbp3Q1HCM0 245 aa10.56□□□□□ -0.72
Ccdc85a-201ENSMUST00000042534 Trav13-2A0A075B649 110 aa10.55□□□□□ -0.72
Ccdc85a-201ENSMUST00000042534 Ighv2-3A0A075B696 115 aa10.55□□□□□ -0.72
Ccdc85a-201ENSMUST00000042534 Igkv8-26A0A075B5N5 123 aa10.55□□□□□ -0.72
Ccdc85a-201ENSMUST00000042534 Tmem254aP0DN89 123 aa10.55□□□□□ -0.72
Ccdc85a-201ENSMUST00000042534 Tmem254bP0DN90 123 aa10.55□□□□□ -0.72
Ccdc85a-201ENSMUST00000042534 Tmem254cP0DN91 123 aa10.55□□□□□ -0.72
Ccdc85a-201ENSMUST00000042534 Klk5Q9D140 293 aa10.55□□□□□ -0.72
Ccdc85a-201ENSMUST00000042534 Col6a4A2AX52 2309 aa10.55□□□□□ -0.72
Ccdc85a-201ENSMUST00000042534 Gm10251J3QPM5 127 aa10.55□□□□□ -0.72
Ccdc85a-201ENSMUST00000042534 Gata1P17679 413 aa10.55□□□□□ -0.72
Ccdc85a-201ENSMUST00000042534 Gm2916Q9D9B9 127 aa10.55□□□□□ -0.72
Ccdc85a-201ENSMUST00000042534 Gvin1Q80SU7 2427 aa10.55□□□□□ -0.72
Ccdc85a-201ENSMUST00000042534 Gm10226O88253 85 aa10.54□□□□□ -0.72
Ccdc85a-201ENSMUST00000042534 FcorP0DJI6 106 aa10.54□□□□□ -0.72
Ccdc85a-201ENSMUST00000042534 P18527 97 aa10.54□□□□□ -0.72
Ccdc85a-201ENSMUST00000042534 Pcnx3Q8VI59 2028 aa10.54□□□□□ -0.72
Ccdc85a-201ENSMUST00000042534 Ly6gP35461 111 aa10.53□□□□□ -0.72
Ccdc85a-201ENSMUST00000042534 Trav13-1A0A075B644 110 aa10.53□□□□□ -0.72
Ccdc85a-201ENSMUST00000042534 Ighv2-6-8A0A0A6YWY9 116 aa10.53□□□□□ -0.72
Ccdc85a-201ENSMUST00000042534 Timm17bQ9Z0V7 172 aa10.53□□□□□ -0.72
Ccdc85a-201ENSMUST00000042534 Tet1Q3URK3 2007 aaKnown RBP10.52□□□□□ -0.72
Ccdc85a-201ENSMUST00000042534 Trav9n-4A0A075B631 113 aa10.52□□□□□ -0.72
Ccdc85a-201ENSMUST00000042534 Igkv1-35A0A0G2JDE5 120 aa10.52□□□□□ -0.72
Ccdc85a-201ENSMUST00000042534 Trav13n-2A0A0G2JF93 110 aa10.52□□□□□ -0.72
Ccdc85a-201ENSMUST00000042534 Tcl1b3P56842 122 aa10.52□□□□□ -0.72
Ccdc85a-201ENSMUST00000042534 Spink8Q09TK9 105 aa10.52□□□□□ -0.72
Ccdc85a-201ENSMUST00000042534 B230359F08RikA0A0B4J1K3 109 aa10.52□□□□□ -0.73
Ccdc85a-201ENSMUST00000042534 CnfnQ6PCW6 111 aa10.52□□□□□ -0.73
Ccdc85a-201ENSMUST00000042534 Igkv2-109A0A075B5K6 120 aa10.51□□□□□ -0.73
Ccdc85a-201ENSMUST00000042534 B9d2Q3UK10 175 aa10.51□□□□□ -0.73
Ccdc85a-201ENSMUST00000042534 Ighv3-3A0A0A6YWL2 116 aa10.51□□□□□ -0.73
Ccdc85a-201ENSMUST00000042534 Klk12B2RVZ0 247 aa10.51□□□□□ -0.73
Ccdc85a-201ENSMUST00000042534 Gm17577J3QNF7 156 aa10.51□□□□□ -0.73
Ccdc85a-201ENSMUST00000042534 B430305J03RikQ8BQQ8 176 aa10.51□□□□□ -0.73
Retrieved 100 of 22,080 RNA–protein pairs in 80.8 ms