RNA–Protein interactions for RNA: ENSMUST00000042534.14

Ccdc85a-201, Transcript of Coiled-coil domain-containing protein 85A, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ccdc85a, Length 5,332 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc85a-201ENSMUST00000042534 Rhox8Q6VSS7 320 aa24.76■■□□□ 1.55
Ccdc85a-201ENSMUST00000042534 Rpgrip1Q9EPQ2 1331 aa23.1■■□□□ 1.29
Ccdc85a-201ENSMUST00000042534 Ehmt2Q9Z148 1263 aaKnown RBP22.16■■□□□ 1.14
Ccdc85a-201ENSMUST00000042534 NischQ80TM9 1593 aa22.09■■□□□ 1.13
Ccdc85a-201ENSMUST00000042534 Ccdc136Q3TVA9 1136 aa21.99■■□□□ 1.11
Ccdc85a-201ENSMUST00000042534 Las1lA2BE28 776 aaKnown RBP21.93■■□□□ 1.1
Ccdc85a-201ENSMUST00000042534 Cngb1E1AZ71 1325 aa21.87■■□□□ 1.09
Ccdc85a-201ENSMUST00000042534 Esf1Q3V1V3 845 aaKnown RBP21.78■■□□□ 1.08
Ccdc85a-201ENSMUST00000042534 Trim41Q5NCC3 630 aa21.75■■□□□ 1.07
Ccdc85a-201ENSMUST00000042534 Wdr66E9Q743 1299 aa21.64■■□□□ 1.05
Ccdc85a-201ENSMUST00000042534 Gab3Q8BSM5 595 aa21.5■■□□□ 1.03
Ccdc85a-201ENSMUST00000042534 Zeb1Q64318 1117 aa21.45■■□□□ 1.02
Ccdc85a-201ENSMUST00000042534 Pelp1Q9DBD5 1123 aaKnown RBP21.35■■□□□ 1.01
Ccdc85a-201ENSMUST00000042534 Acin1Q9JIX8 1338 aaKnown RBP21.35■■□□□ 1.01
Ccdc85a-201ENSMUST00000042534 Npm2Q80W85 207 aa21.34■■□□□ 1.01
Ccdc85a-201ENSMUST00000042534 Ube2uB1AUC4 352 aa21.28■■□□□ 1
Ccdc85a-201ENSMUST00000042534 Ccdc180J3QNE4 1664 aa21.25■□□□□ 0.99
Ccdc85a-201ENSMUST00000042534 NefmP08553 848 aa21.15■□□□□ 0.98
Ccdc85a-201ENSMUST00000042534 Myt1lP97500 1187 aa21.13■□□□□ 0.97
Ccdc85a-201ENSMUST00000042534 Rtl1Q7M732 1744 aa21.1■□□□□ 0.97
Ccdc85a-201ENSMUST00000042534 HrcG5E8J6 738 aa21.05■□□□□ 0.96
Ccdc85a-201ENSMUST00000042534 CenpbP27790 599 aa20.86■□□□□ 0.93
Ccdc85a-201ENSMUST00000042534 UbtfP25976 765 aaKnown RBP20.82■□□□□ 0.92
Ccdc85a-201ENSMUST00000042534 Stra8P70278 393 aa20.8■□□□□ 0.92
Ccdc85a-201ENSMUST00000042534 Abcc9P70170 1546 aa20.66■□□□□ 0.9
Ccdc85a-201ENSMUST00000042534 Pcgf6Q99NA9 353 aa20.49■□□□□ 0.87
Ccdc85a-201ENSMUST00000042534 Cdk11bP24788 784 aaKnown RBP20.47■□□□□ 0.87
Ccdc85a-201ENSMUST00000042534 Zcchc6Q5BLK4 1491 aaKnown RBP20.47■□□□□ 0.87
Ccdc85a-201ENSMUST00000042534 Il27Q8K3I6 234 aa20.32■□□□□ 0.84
Ccdc85a-201ENSMUST00000042534 Slc24a1Q91WD8 1130 aa20.32■□□□□ 0.84
Ccdc85a-201ENSMUST00000042534 Tnnt3Q9QZ47 272 aa20.29■□□□□ 0.84
Ccdc85a-201ENSMUST00000042534 Myt1Q8CFC2 1127 aa20.23■□□□□ 0.83
Ccdc85a-201ENSMUST00000042534 Nop58Q6DFW4 536 aaKnown RBP20.23■□□□□ 0.83
Ccdc85a-201ENSMUST00000042534 Amer1Q7TS75 1132 aa20.18■□□□□ 0.82
Ccdc85a-201ENSMUST00000042534 Fam50aQ9WV03 339 aaKnown RBP20.14■□□□□ 0.81
Ccdc85a-201ENSMUST00000042534 Abcc8B2RUS7 1588 aa20.13■□□□□ 0.81
Ccdc85a-201ENSMUST00000042534 NrdcQ8BHG1 1161 aa20.12■□□□□ 0.81
Ccdc85a-201ENSMUST00000042534 NclP09405 707 aaKnown RBP20.11■□□□□ 0.81
Ccdc85a-201ENSMUST00000042534 Anp32bQ9EST5 272 aaKnown RBP20.11■□□□□ 0.81
Ccdc85a-201ENSMUST00000042534 TonslQ6NZL6 1363 aa20.1■□□□□ 0.81
Ccdc85a-201ENSMUST00000042534 Supt5hO55201 1082 aaKnown RBP20.08■□□□□ 0.8
Ccdc85a-201ENSMUST00000042534 Ap3b1Q9Z1T1 1105 aa20.08■□□□□ 0.8
Ccdc85a-201ENSMUST00000042534 Mier1Q5UAK0 511 aa20■□□□□ 0.79
Ccdc85a-201ENSMUST00000042534 Gm35339A0A140LHH9 1649 aa19.95■□□□□ 0.78
Ccdc85a-201ENSMUST00000042534 NeflP08551 543 aa19.91■□□□□ 0.78
Ccdc85a-201ENSMUST00000042534 Neurod1Q60867 357 aa19.91■□□□□ 0.78
Ccdc85a-201ENSMUST00000042534 Ppargc1bQ8VHJ7 1014 aa19.81■□□□□ 0.76
Ccdc85a-201ENSMUST00000042534 Eif5bQ05D44 1216 aaKnown RBP19.79■□□□□ 0.76
Ccdc85a-201ENSMUST00000042534 ClspnQ80YR7 1315 aa19.78■□□□□ 0.76
Ccdc85a-201ENSMUST00000042534 Rtl5Q5DTT4 599 aa19.78■□□□□ 0.76
Ccdc85a-201ENSMUST00000042534 Dcaf1Q80TR8 1506 aa19.74■□□□□ 0.75
Ccdc85a-201ENSMUST00000042534 4933416C03RikQ3V063 378 aa19.72■□□□□ 0.75
Ccdc85a-201ENSMUST00000042534 Os9Q8K2C7 672 aa19.71■□□□□ 0.75
Ccdc85a-201ENSMUST00000042534 Brd4Q9ESU6 1400 aaKnown RBP19.68■□□□□ 0.74
Ccdc85a-201ENSMUST00000042534 Ttbk1Q6PCN3 1308 aa19.67■□□□□ 0.74
Ccdc85a-201ENSMUST00000042534 Cep164Q5DU05 1446 aa19.67■□□□□ 0.74
Ccdc85a-201ENSMUST00000042534 Npm1Q61937 292 aaKnown RBP19.64■□□□□ 0.73
Ccdc85a-201ENSMUST00000042534 Plekhg3Q4VAC9 1341 aa19.63■□□□□ 0.73
Ccdc85a-201ENSMUST00000042534 Lmod2Q3UHZ5 550 aa19.55■□□□□ 0.72
Ccdc85a-201ENSMUST00000042534 4930567H17RikQ3V0K5 233 aa19.51■□□□□ 0.71
Ccdc85a-201ENSMUST00000042534 Anp32aO35381 247 aa19.49■□□□□ 0.71
Ccdc85a-201ENSMUST00000042534 Rb1cc1Q9ESK9 1588 aa19.47■□□□□ 0.71
Ccdc85a-201ENSMUST00000042534 Clip1Q922J3 1391 aa19.45■□□□□ 0.7
Ccdc85a-201ENSMUST00000042534 Chic1Q8CBW7 227 aa19.39■□□□□ 0.69
Ccdc85a-201ENSMUST00000042534 Ccer2J3QPU5 274 aa19.38■□□□□ 0.69
Ccdc85a-201ENSMUST00000042534 Anks4bQ8K3X6 423 aa19.37■□□□□ 0.69
Ccdc85a-201ENSMUST00000042534 Sall2Q9QX96 1004 aa19.36■□□□□ 0.69
Ccdc85a-201ENSMUST00000042534 Hdac5Q9Z2V6 1113 aa19.29■□□□□ 0.68
Ccdc85a-201ENSMUST00000042534 Eid3Q3V124 375 aa19.26■□□□□ 0.67
Ccdc85a-201ENSMUST00000042534 Hnrnpul2Q00PI9 745 aaKnown RBP19.26■□□□□ 0.67
Ccdc85a-201ENSMUST00000042534 Zbtb7cQ8VCZ7 619 aa19.25■□□□□ 0.67
Ccdc85a-201ENSMUST00000042534 Aplp2Q06335 707 aa19.19■□□□□ 0.66
Ccdc85a-201ENSMUST00000042534 Nlrp6Q91WS2 869 aa19.15■□□□□ 0.66
Ccdc85a-201ENSMUST00000042534 Mapk8ip2Q9ERE9 830 aa19.14■□□□□ 0.65
Ccdc85a-201ENSMUST00000042534 Csrnp3P59055 597 aa19.11■□□□□ 0.65
Ccdc85a-201ENSMUST00000042534 NacadQ5SWP3 1504 aa19.1■□□□□ 0.65
Ccdc85a-201ENSMUST00000042534 DaxxO35613 739 aa19.07■□□□□ 0.64
Ccdc85a-201ENSMUST00000042534 Baz1aO88379 1555 aa19.06■□□□□ 0.64
Ccdc85a-201ENSMUST00000042534 Erich6D3Z6S9 713 aa19.05■□□□□ 0.64
Ccdc85a-201ENSMUST00000042534 Zbtb4Q5F293 982 aa19.03■□□□□ 0.64
Ccdc85a-201ENSMUST00000042534 Upf2A2AT37 1269 aaKnown RBP19.02■□□□□ 0.64
Ccdc85a-201ENSMUST00000042534 Calr4Q3TQS0 420 aa19.02■□□□□ 0.63
Ccdc85a-201ENSMUST00000042534 Gm13697A2AK42 830 aa19.01■□□□□ 0.63
Ccdc85a-201ENSMUST00000042534 DiexfQ8BTT6 772 aaKnown RBP19■□□□□ 0.63
Ccdc85a-201ENSMUST00000042534 BlmO88700 1416 aa18.99■□□□□ 0.63
Ccdc85a-201ENSMUST00000042534 Golga3P55937 1487 aa18.99■□□□□ 0.63
Ccdc85a-201ENSMUST00000042534 Gm38655A0A286YDK6 273 aa18.96■□□□□ 0.63
Ccdc85a-201ENSMUST00000042534 Ubl4bQ9CQ84 188 aa18.95■□□□□ 0.62
Ccdc85a-201ENSMUST00000042534 Setd5Q5XJV7 1441 aa18.92■□□□□ 0.62
Ccdc85a-201ENSMUST00000042534 Atp1b4Q99ME6 356 aa18.92■□□□□ 0.62
Ccdc85a-201ENSMUST00000042534 Ifnlr1Q8CGK5 535 aa18.91■□□□□ 0.62
Ccdc85a-201ENSMUST00000042534 Polr3glQ8R0C0 218 aa18.89■□□□□ 0.62
Ccdc85a-201ENSMUST00000042534 Ppp4r2Q0VGB7 417 aa18.88■□□□□ 0.61
Ccdc85a-201ENSMUST00000042534 Clstn2Q9ER65 966 aa18.88■□□□□ 0.61
Ccdc85a-201ENSMUST00000042534 Chic2Q9D9G3 165 aa18.88■□□□□ 0.61
Ccdc85a-201ENSMUST00000042534 Fkbp15Q6P9Q6 1216 aaKnown RBP18.87■□□□□ 0.61
Ccdc85a-201ENSMUST00000042534 Mrs2Q5NCE8 434 aa18.86■□□□□ 0.61
Ccdc85a-201ENSMUST00000042534 Wdr43Q6ZQL4 677 aaKnown RBP18.84■□□□□ 0.61
Ccdc85a-201ENSMUST00000042534 Prdm10Q3UTQ7 1184 aa18.81■□□□□ 0.6
Ccdc85a-201ENSMUST00000042534 Rsf1E9PWW9 1441 aaKnown RBP18.76■□□□□ 0.59
Retrieved 100 of 22,080 RNA–protein pairs in 127.7 ms