RNA–Protein interactions for RNA: ENSMUST00000035237.11

Usp4-201, Transcript of Ubiquitin carboxyl-terminal hydrolase 4, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Usp4, Length 3,662 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp4-201ENSMUST00000035237 Phpt1Q9DAK9 124 aa11.35□□□□□ -0.59
Usp4-201ENSMUST00000035237 Fam216aQ9DB54 251 aa11.35□□□□□ -0.59
Usp4-201ENSMUST00000035237 Phlda3Q9WV95 125 aa11.34□□□□□ -0.59
Usp4-201ENSMUST00000035237 Timm17aQ9Z0V8 171 aa11.34□□□□□ -0.59
Usp4-201ENSMUST00000035237 Trav13d-1A0A075B606 110 aa11.34□□□□□ -0.59
Usp4-201ENSMUST00000035237 Gm15557A6PWY0 234 aa11.34□□□□□ -0.59
Usp4-201ENSMUST00000035237 PspnO70300 156 aa11.34□□□□□ -0.59
Usp4-201ENSMUST00000035237 Nav3Q80TN7 2359 aa11.34□□□□□ -0.59
Usp4-201ENSMUST00000035237 Ndufb4Q9CQC7 129 aa11.34□□□□□ -0.59
Usp4-201ENSMUST00000035237 Ndufs7Q9DC70 224 aa11.34□□□□□ -0.59
Usp4-201ENSMUST00000035237 Tmem263Q9DAM7 115 aa11.33□□□□□ -0.59
Usp4-201ENSMUST00000035237 Igkv4-70A0A0B4J1I5 116 aa11.33□□□□□ -0.6
Usp4-201ENSMUST00000035237 Gm6793B2RXM2 351 aa11.33□□□□□ -0.6
Usp4-201ENSMUST00000035237 Odf1Q61999 247 aa11.33□□□□□ -0.6
Usp4-201ENSMUST00000035237 Adgrg4B7ZCC9 3073 aa11.32□□□□□ -0.6
Usp4-201ENSMUST00000035237 Gm20499D3Z4G5 72 aa11.32□□□□□ -0.6
Usp4-201ENSMUST00000035237 CirbpP60824 172 aaKnown RBP11.32□□□□□ -0.6
Usp4-201ENSMUST00000035237 NbasE9Q411 2356 aa11.32□□□□□ -0.6
Usp4-201ENSMUST00000035237 LhbO09108 141 aa11.32□□□□□ -0.6
Usp4-201ENSMUST00000035237 Gata1P17679 413 aa11.32□□□□□ -0.6
Usp4-201ENSMUST00000035237 Smg1Q8BKX6 3658 aaKnown RBP11.32□□□□□ -0.6
Usp4-201ENSMUST00000035237 Ighv12-3A0A075B5T1 117 aa11.32□□□□□ -0.6
Usp4-201ENSMUST00000035237 Gm867A0A1W2P7T4 151 aa11.32□□□□□ -0.6
Usp4-201ENSMUST00000035237 Gm10135F6TEE5 83 aa11.32□□□□□ -0.6
Usp4-201ENSMUST00000035237 Edn2P22389 175 aa11.32□□□□□ -0.6
Usp4-201ENSMUST00000035237 Usmg5Q78IK2 58 aa11.32□□□□□ -0.6
Usp4-201ENSMUST00000035237 Usp9xP70398 2559 aaKnown RBP11.32□□□□□ -0.6
Usp4-201ENSMUST00000035237 Ighv1-12A0A0A6YXJ9 117 aa11.31□□□□□ -0.6
Usp4-201ENSMUST00000035237 Polr2kQ63871 58 aa11.31□□□□□ -0.6
Usp4-201ENSMUST00000035237 Prelid3aQ8VE85 172 aa11.31□□□□□ -0.6
Usp4-201ENSMUST00000035237 Abca2P41234 2434 aa11.31□□□□□ -0.6
Usp4-201ENSMUST00000035237 MsmbO08540 113 aa11.31□□□□□ -0.6
Usp4-201ENSMUST00000035237 Wdr38Q9D994 303 aa11.31□□□□□ -0.6
Usp4-201ENSMUST00000035237 AcacbE9Q4Z2 2448 aa11.31□□□□□ -0.6
Usp4-201ENSMUST00000035237 Cyyr1Q8VIH7 165 aa11.31□□□□□ -0.6
Usp4-201ENSMUST00000035237 Avpi1Q9D7H4 142 aa11.31□□□□□ -0.6
Usp4-201ENSMUST00000035237 Ighv1-75A0A075B5Y2 117 aa11.3□□□□□ -0.6
Usp4-201ENSMUST00000035237 Wfdc11A2A5H7 82 aa11.3□□□□□ -0.6
Usp4-201ENSMUST00000035237 Ighv5-8A0A075B676 92 aa11.29□□□□□ -0.6
Usp4-201ENSMUST00000035237 P01753 117 aa11.29□□□□□ -0.6
Usp4-201ENSMUST00000035237 Foxc1Q61572 553 aa11.29□□□□□ -0.6
Usp4-201ENSMUST00000035237 Gm4861Q8C5A4 106 aa11.29□□□□□ -0.6
Usp4-201ENSMUST00000035237 Ttc28Q80XJ3 2450 aa11.29□□□□□ -0.6
Usp4-201ENSMUST00000035237 P04219 140 aa11.29□□□□□ -0.6
Usp4-201ENSMUST00000035237 P01820 115 aa11.28□□□□□ -0.6
Usp4-201ENSMUST00000035237 Mfap4Q9D1H9 257 aa11.28□□□□□ -0.6
Usp4-201ENSMUST00000035237 Spink1P09036 80 aa11.28□□□□□ -0.6
Usp4-201ENSMUST00000035237 Ss18Q62280 418 aa11.28□□□□□ -0.6
Usp4-201ENSMUST00000035237 NpwA0A1L1STR8 176 aa11.27□□□□□ -0.6
Usp4-201ENSMUST00000035237 Glrp1E9Q9S8 174 aa11.27□□□□□ -0.6
Usp4-201ENSMUST00000035237 Socs3O35718 225 aa11.27□□□□□ -0.6
Usp4-201ENSMUST00000035237 GalmQ8K157 342 aa11.27□□□□□ -0.6
Usp4-201ENSMUST00000035237 Smrp1Q2MH31 260 aa11.27□□□□□ -0.61
Usp4-201ENSMUST00000035237 Cfap126Q6P8X9 189 aa11.27□□□□□ -0.61
Usp4-201ENSMUST00000035237 Tmem101Q91VP7 257 aa11.27□□□□□ -0.61
Usp4-201ENSMUST00000035237 Defa25Q5G864 92 aa11.27□□□□□ -0.61
Usp4-201ENSMUST00000035237 Trav9-2A0A075B647 113 aa11.26□□□□□ -0.61
Usp4-201ENSMUST00000035237 Gm28539A0A087WSL9 92 aa11.26□□□□□ -0.61
Usp4-201ENSMUST00000035237 Ighv3-3A0A0A6YWL2 116 aa11.26□□□□□ -0.61
Usp4-201ENSMUST00000035237 Trav9-4A0A0B4J1K2 113 aa11.26□□□□□ -0.61
Usp4-201ENSMUST00000035237 Prp2P05143 317 aa11.26□□□□□ -0.61
Usp4-201ENSMUST00000035237 Gphb5Q812B2 130 aa11.26□□□□□ -0.61
Usp4-201ENSMUST00000035237 Prr13Q9CQJ5 137 aa11.26□□□□□ -0.61
Usp4-201ENSMUST00000035237 Smim10l1A0A087WNQ7 89 aa11.25□□□□□ -0.61
Usp4-201ENSMUST00000035237 Lmo4P61969 165 aa11.25□□□□□ -0.61
Usp4-201ENSMUST00000035237 Smr3aQ61900 147 aa11.25□□□□□ -0.61
Usp4-201ENSMUST00000035237 Gm7849D3YX03 116 aa11.25□□□□□ -0.61
Usp4-201ENSMUST00000035237 Tcte2E9PY37 120 aa11.25□□□□□ -0.61
Usp4-201ENSMUST00000035237 Msrb2Q78J03 175 aa11.25□□□□□ -0.61
Usp4-201ENSMUST00000035237 Rnf183Q8QZS5 190 aa11.25□□□□□ -0.61
Usp4-201ENSMUST00000035237 Trbv16A0A0B4J1H3 115 aa11.24□□□□□ -0.61
Usp4-201ENSMUST00000035237 H1fxQ80ZM5 188 aa11.24□□□□□ -0.61
Usp4-201ENSMUST00000035237 Gm9936Q8C864 160 aa11.24□□□□□ -0.61
Usp4-201ENSMUST00000035237 RetnQ99P87 114 aa11.24□□□□□ -0.61
Usp4-201ENSMUST00000035237 Trdv5A0A075B661 115 aa11.23□□□□□ -0.61
Usp4-201ENSMUST00000035237 Gm904Q3V2L5 102 aa11.23□□□□□ -0.61
Usp4-201ENSMUST00000035237 Psmb11Q8BG41 302 aa11.23□□□□□ -0.61
Usp4-201ENSMUST00000035237 Synj2bpQ9D6K5 145 aa11.22□□□□□ -0.61
Usp4-201ENSMUST00000035237 Ndufa11Q9D8B4 141 aa11.22□□□□□ -0.61
Usp4-201ENSMUST00000035237 Trav13n-1A0A0G2JEU8 110 aa11.22□□□□□ -0.61
Usp4-201ENSMUST00000035237 Ly86O88188 162 aa11.22□□□□□ -0.61
Usp4-201ENSMUST00000035237 Chd8Q09XV5 2582 aaKnown RBP11.22□□□□□ -0.61
Usp4-201ENSMUST00000035237 Ighv2-7A0A075B5Q8 116 aa11.21□□□□□ -0.61
Usp4-201ENSMUST00000035237 Ighv1-66A0A075B5X5 117 aa11.21□□□□□ -0.61
Usp4-201ENSMUST00000035237 Pglyrp1O88593 182 aa11.21□□□□□ -0.61
Usp4-201ENSMUST00000035237 P84751 237 aa11.21□□□□□ -0.62
Usp4-201ENSMUST00000035237 Ptpn13Q64512 2453 aa11.21□□□□□ -0.62
Usp4-201ENSMUST00000035237 Q9DAB9 146 aa11.21□□□□□ -0.62
Usp4-201ENSMUST00000035237 Ighv1-85A0A075B5Y6 117 aa11.2□□□□□ -0.62
Usp4-201ENSMUST00000035237 Trank1Q8BV79 2999 aa11.2□□□□□ -0.62
Usp4-201ENSMUST00000035237 1810032O08RikE9PZV8 113 aa11.2□□□□□ -0.62
Usp4-201ENSMUST00000035237 BC067074F6RXI4 2391 aa11.19□□□□□ -0.62
Usp4-201ENSMUST00000035237 Spry2Q9QXV8 315 aa11.19□□□□□ -0.62
Usp4-201ENSMUST00000035237 Mzt1Q8BUR9 78 aa11.19□□□□□ -0.62
Usp4-201ENSMUST00000035237 BC025920Q3US60 128 aa11.18□□□□□ -0.62
Usp4-201ENSMUST00000035237 Ifitm1Q9D103 106 aa11.18□□□□□ -0.62
Usp4-201ENSMUST00000035237 Lce6aD3YV94 81 aa11.18□□□□□ -0.62
Usp4-201ENSMUST00000035237 Bahcc1Q3UHR0 2643 aa11.18□□□□□ -0.62
Usp4-201ENSMUST00000035237 Trav9n-2A0A0G2JDP3 113 aa11.17□□□□□ -0.62
Usp4-201ENSMUST00000035237 Gm10542F6XDR3 90 aa11.17□□□□□ -0.62
Retrieved 100 of 22,080 RNA–protein pairs in 77.3 ms