RNA–Protein interactions for RNA: ENSMUST00000192168.1

Pcdha5-201, Transcript of Protocadherin alpha 5, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdha5, Length 5,206 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha5-201ENSMUST00000192168 Gm9949Q8C9F4 104 aa11.47□□□□□ -0.57
Pcdha5-201ENSMUST00000192168 Gm9958Q8C9U4 106 aa11.47□□□□□ -0.57
Pcdha5-201ENSMUST00000192168 PkdrejQ9Z0T6 2126 aa11.47□□□□□ -0.57
Pcdha5-201ENSMUST00000192168 Qrich2A0A140LIY9 2337 aa11.46□□□□□ -0.57
Pcdha5-201ENSMUST00000192168 Dad1P61804 113 aa11.46□□□□□ -0.57
Pcdha5-201ENSMUST00000192168 Dph3Q8K0W9 82 aa11.46□□□□□ -0.57
Pcdha5-201ENSMUST00000192168 PoleQ9WVF7 2283 aa11.46□□□□□ -0.57
Pcdha5-201ENSMUST00000192168 Spag11Q8K4N2 71 aa11.46□□□□□ -0.57
Pcdha5-201ENSMUST00000192168 AW146154Q3TPQ7 468 aa11.46□□□□□ -0.58
Pcdha5-201ENSMUST00000192168 Znf672Q99LH4 468 aa11.46□□□□□ -0.58
Pcdha5-201ENSMUST00000192168 Igkv4-72A0A0B4J1I4 117 aa11.46□□□□□ -0.58
Pcdha5-201ENSMUST00000192168 Q9D131 166 aa11.46□□□□□ -0.58
Pcdha5-201ENSMUST00000192168 Fgf6P21658 208 aa11.45□□□□□ -0.58
Pcdha5-201ENSMUST00000192168 AcacaQ5SWU9 2345 aa11.45□□□□□ -0.58
Pcdha5-201ENSMUST00000192168 Igkv3-2A0A075B5P0 119 aa11.45□□□□□ -0.58
Pcdha5-201ENSMUST00000192168 AtrxQ61687 2476 aaKnown RBP11.45□□□□□ -0.58
Pcdha5-201ENSMUST00000192168 Odf3Q920N1 254 aa11.45□□□□□ -0.58
Pcdha5-201ENSMUST00000192168 Ccl24Q9JKC0 119 aa11.45□□□□□ -0.58
Pcdha5-201ENSMUST00000192168 Jmjd1cQ69ZK6 2350 aa11.45□□□□□ -0.58
Pcdha5-201ENSMUST00000192168 9130230L23RikQ8CC80 163 aa11.44□□□□□ -0.58
Pcdha5-201ENSMUST00000192168 Ighv1-75A0A075B5Y2 117 aa11.44□□□□□ -0.58
Pcdha5-201ENSMUST00000192168 Pglyrp1O88593 182 aa11.44□□□□□ -0.58
Pcdha5-201ENSMUST00000192168 Eif4ebp1Q60876 117 aa11.44□□□□□ -0.58
Pcdha5-201ENSMUST00000192168 Prop1P97458 223 aa11.44□□□□□ -0.58
Pcdha5-201ENSMUST00000192168 Gm14137Q8CE97 175 aa11.43□□□□□ -0.58
Pcdha5-201ENSMUST00000192168 Wfdc15bQ9JHY4 80 aa11.43□□□□□ -0.58
Pcdha5-201ENSMUST00000192168 Ighv1-11A0A0A6YWI9 117 aa11.43□□□□□ -0.58
Pcdha5-201ENSMUST00000192168 Trbv13-1A0A0B4J1P8 112 aa11.43□□□□□ -0.58
Pcdha5-201ENSMUST00000192168 Chchd5Q9CQP3 110 aa11.43□□□□□ -0.58
Pcdha5-201ENSMUST00000192168 Akap6E9Q9K8 2307 aa11.43□□□□□ -0.58
Pcdha5-201ENSMUST00000192168 Igkv4-69A0A0B4J1I6 116 aa11.42□□□□□ -0.58
Pcdha5-201ENSMUST00000192168 Zfand3Q497H0 227 aa11.42□□□□□ -0.58
Pcdha5-201ENSMUST00000192168 UrahQ9CRB3 118 aa11.42□□□□□ -0.58
Pcdha5-201ENSMUST00000192168 Fxyd5P97808 178 aa11.42□□□□□ -0.58
Pcdha5-201ENSMUST00000192168 Defb26Q30KN7 186 aa11.42□□□□□ -0.58
Pcdha5-201ENSMUST00000192168 Gm44965A0A0N4SVR3 59 aa11.41□□□□□ -0.58
Pcdha5-201ENSMUST00000192168 Tmem254aP0DN89 123 aa11.41□□□□□ -0.58
Pcdha5-201ENSMUST00000192168 Tmem254bP0DN90 123 aa11.41□□□□□ -0.58
Pcdha5-201ENSMUST00000192168 Tmem254cP0DN91 123 aa11.41□□□□□ -0.58
Pcdha5-201ENSMUST00000192168 Trav9-2A0A075B647 113 aa11.41□□□□□ -0.58
Pcdha5-201ENSMUST00000192168 Trav9-4A0A0B4J1K2 113 aa11.41□□□□□ -0.58
Pcdha5-201ENSMUST00000192168 Crlf1Q9JM58 425 aa11.4□□□□□ -0.58
Pcdha5-201ENSMUST00000192168 Zfp407G3UVV3 2246 aa11.4□□□□□ -0.58
Pcdha5-201ENSMUST00000192168 Ndufs7Q9DC70 224 aa11.4□□□□□ -0.58
Pcdha5-201ENSMUST00000192168 Med12A2AGH6 2190 aa11.4□□□□□ -0.58
Pcdha5-201ENSMUST00000192168 Igkv4-57A0A0A6YYE7 117 aa11.4□□□□□ -0.58
Pcdha5-201ENSMUST00000192168 Cox8cA6H666 72 aa11.4□□□□□ -0.58
Pcdha5-201ENSMUST00000192168 Triap1Q9D8Z2 76 aa11.4□□□□□ -0.58
Pcdha5-201ENSMUST00000192168 Igkv4-78A0A0A6YYE5 119 aa11.4□□□□□ -0.59
Pcdha5-201ENSMUST00000192168 Wfdc11A2A5H7 82 aa11.4□□□□□ -0.59
Pcdha5-201ENSMUST00000192168 Gata3P23772 443 aa11.4□□□□□ -0.59
Pcdha5-201ENSMUST00000192168 Nop10Q9CQS2 64 aa11.4□□□□□ -0.59
Pcdha5-201ENSMUST00000192168 Prr12E9PYL2 2035 aaKnown RBP11.39□□□□□ -0.59
Pcdha5-201ENSMUST00000192168 Igkv8-34A0A0G2JDU0 121 aa11.39□□□□□ -0.59
Pcdha5-201ENSMUST00000192168 OdaphJ3QNT8 126 aa11.39□□□□□ -0.59
Pcdha5-201ENSMUST00000192168 Ighv8-5A0A0A6YY60 119 aa11.39□□□□□ -0.59
Pcdha5-201ENSMUST00000192168 Igkv4-79A0A075B5L8 119 aa11.39□□□□□ -0.59
Pcdha5-201ENSMUST00000192168 Nsun4C4P6S0 806 aaKnown RBP11.39□□□□□ -0.59
Pcdha5-201ENSMUST00000192168 Sp5Q9JHX2 398 aa11.39□□□□□ -0.59
Pcdha5-201ENSMUST00000192168 Ahctf1Q8CJF7 2243 aaKnown RBP11.39□□□□□ -0.59
Pcdha5-201ENSMUST00000192168 Spink8Q09TK9 105 aa11.39□□□□□ -0.59
Pcdha5-201ENSMUST00000192168 Sptbn1Q62261 2363 aaKnown RBP11.39□□□□□ -0.59
Pcdha5-201ENSMUST00000192168 Pde6gP09174 87 aa11.38□□□□□ -0.59
Pcdha5-201ENSMUST00000192168 Heatr5aQ5PRF0 2038 aa11.38□□□□□ -0.59
Pcdha5-201ENSMUST00000192168 Usf3B2RUQ2 2221 aa11.37□□□□□ -0.59
Pcdha5-201ENSMUST00000192168 Trav9n-2A0A0G2JDP3 113 aa11.37□□□□□ -0.59
Pcdha5-201ENSMUST00000192168 Znf239P24399 201 aa11.37□□□□□ -0.59
Pcdha5-201ENSMUST00000192168 Ormdl1Q921I0 153 aa11.37□□□□□ -0.59
Pcdha5-201ENSMUST00000192168 Tmem223Q9CQE2 199 aaKnown RBP11.37□□□□□ -0.59
Pcdha5-201ENSMUST00000192168 Q9CX25 107 aa11.37□□□□□ -0.59
Pcdha5-201ENSMUST00000192168 1110002E22RikE0CYV9 1786 aa11.37□□□□□ -0.59
Pcdha5-201ENSMUST00000192168 Ighv1-61P01749 117 aa11.37□□□□□ -0.59
Pcdha5-201ENSMUST00000192168 Rnf114Q9ET26 229 aa11.37□□□□□ -0.59
Pcdha5-201ENSMUST00000192168 Ighv8-12A0A0G2JDE1 119 aa11.37□□□□□ -0.59
Pcdha5-201ENSMUST00000192168 Gm10553J3QPF1 123 aa11.37□□□□□ -0.59
Pcdha5-201ENSMUST00000192168 Gm15557A6PWY0 234 aa11.36□□□□□ -0.59
Pcdha5-201ENSMUST00000192168 Gm21994F6T2D2 329 aa11.36□□□□□ -0.59
Pcdha5-201ENSMUST00000192168 Ndufc1Q9CQY9 76 aa11.36□□□□□ -0.59
Pcdha5-201ENSMUST00000192168 P06328 117 aa11.36□□□□□ -0.59
Pcdha5-201ENSMUST00000192168 HelzQ6DFV5 1964 aaKnown RBP11.36□□□□□ -0.59
Pcdha5-201ENSMUST00000192168 BtcQ05928 177 aa11.36□□□□□ -0.59
Pcdha5-201ENSMUST00000192168 Brk1Q91VR8 75 aa11.36□□□□□ -0.59
Pcdha5-201ENSMUST00000192168 Rnf185Q91YT2 192 aa11.36□□□□□ -0.59
Pcdha5-201ENSMUST00000192168 Tet2Q4JK59 1912 aaKnown RBP11.35□□□□□ -0.59
Pcdha5-201ENSMUST00000192168 Cacna1gQ5SUF7 2381 aa11.35□□□□□ -0.59
Pcdha5-201ENSMUST00000192168 P01643 108 aa11.35□□□□□ -0.59
Pcdha5-201ENSMUST00000192168 Ang3P97802 145 aa11.35□□□□□ -0.59
Pcdha5-201ENSMUST00000192168 Gm5629P06327 117 aa11.35□□□□□ -0.59
Pcdha5-201ENSMUST00000192168 Igf1P05017 153 aa11.34□□□□□ -0.59
Pcdha5-201ENSMUST00000192168 Pou2af1Q64693 256 aa11.34□□□□□ -0.59
Pcdha5-201ENSMUST00000192168 Timm17bQ9Z0V7 172 aa11.34□□□□□ -0.59
Pcdha5-201ENSMUST00000192168 Trav9d-3A0A075B695 113 aa11.34□□□□□ -0.59
Pcdha5-201ENSMUST00000192168 Gata1P17679 413 aa11.34□□□□□ -0.59
Pcdha5-201ENSMUST00000192168 Q9DAQ5 155 aa11.34□□□□□ -0.59
Pcdha5-201ENSMUST00000192168 Cnot1Q6ZQ08 2375 aaKnown RBP11.34□□□□□ -0.59
Pcdha5-201ENSMUST00000192168 Erdr1J3QMM0 206 aa11.33□□□□□ -0.59
Pcdha5-201ENSMUST00000192168 Pcnx1Q9QYC1 2344 aa11.33□□□□□ -0.6
Pcdha5-201ENSMUST00000192168 Trav13n-1A0A0G2JEU8 110 aa11.33□□□□□ -0.6
Pcdha5-201ENSMUST00000192168 CnfnQ6PCW6 111 aa11.33□□□□□ -0.6
Pcdha5-201ENSMUST00000192168 Ighv1-82A0A0G2JEU7 117 aa11.33□□□□□ -0.6
Retrieved 100 of 22,080 RNA–protein pairs in 54.3 ms