RNA–Protein interactions for RNA: ENSMUST00000186545.1

Trav17-202, Transcript of T cell receptor alpha variable 17 (Fragment), mousemouse

APPRIS ALT2 BASIC

Gene Trav17, Length 338 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trav17-202ENSMUST00000186545 Ubr3Q5U430 1889 aa2.05□□□□□ -2.08
Trav17-202ENSMUST00000186545 Numa1E9Q7G0 2094 aaKnown RBP2.05□□□□□ -2.08
Trav17-202ENSMUST00000186545 Igkv6-32A0A140T8N9 115 aa2.04□□□□□ -2.08
Trav17-202ENSMUST00000186545 Gm6217A0A1Y7VJK9 128 aa2.04□□□□□ -2.08
Trav17-202ENSMUST00000186545 Ube2dnl1A2AFH1 155 aa2.04□□□□□ -2.08
Trav17-202ENSMUST00000186545 Parp4E9PYK3 1969 aa2.04□□□□□ -2.08
Trav17-202ENSMUST00000186545 Ddx60E9PZQ1 1711 aa2.04□□□□□ -2.08
Trav17-202ENSMUST00000186545 Olfr204E9Q8M0 305 aa2.04□□□□□ -2.08
Trav17-202ENSMUST00000186545 Gm9925F6T2U3 160 aa2.04□□□□□ -2.08
Trav17-202ENSMUST00000186545 Vsig4F6TUL9 280 aa2.04□□□□□ -2.08
Trav17-202ENSMUST00000186545 Igkv1-99F6XWB2 120 aa2.04□□□□□ -2.08
Trav17-202ENSMUST00000186545 Polr2jO08740 117 aaKnown RBP2.04□□□□□ -2.08
Trav17-202ENSMUST00000186545 Znf106O88466 1888 aa2.04□□□□□ -2.08
Trav17-202ENSMUST00000186545 P01658 132 aa2.04□□□□□ -2.08
Trav17-202ENSMUST00000186545 Bcl2a1cQ0P538 128 aa2.04□□□□□ -2.08
Trav17-202ENSMUST00000186545 Gm10577Q3UDV9 132 aa2.04□□□□□ -2.08
Trav17-202ENSMUST00000186545 Sft2d1Q5SSN7 159 aa2.04□□□□□ -2.08
Trav17-202ENSMUST00000186545 Nup98Q6PFD9 1816 aaKnown RBP2.04□□□□□ -2.08
Trav17-202ENSMUST00000186545 Olfr492Q8VFD1 314 aa2.04□□□□□ -2.08
Trav17-202ENSMUST00000186545 Tomm20lQ9D4V6 152 aa2.04□□□□□ -2.08
Trav17-202ENSMUST00000186545 Pcm1Q9R0L6 2025 aa2.03□□□□□ -2.08
Trav17-202ENSMUST00000186545 HelzQ6DFV5 1964 aaKnown RBP2.03□□□□□ -2.08
Trav17-202ENSMUST00000186545 Ltbp2O08999 1813 aa2.03□□□□□ -2.08
Trav17-202ENSMUST00000186545 Col4a5Q63ZW6 1691 aa2.03□□□□□ -2.08
Trav17-202ENSMUST00000186545 Igkv8-26A0A075B5N5 123 aa2.03□□□□□ -2.08
Trav17-202ENSMUST00000186545 Ighv5-15A0A0A6YWC7 117 aa2.03□□□□□ -2.08
Trav17-202ENSMUST00000186545 Trbv2A0A0B4J1G8 114 aa2.03□□□□□ -2.08
Trav17-202ENSMUST00000186545 Igkv1-135A0A0B4J1H7 120 aa2.03□□□□□ -2.08
Trav17-202ENSMUST00000186545 Igkv8-18A0A0B4J1J3 123 aa2.03□□□□□ -2.08
Trav17-202ENSMUST00000186545 Zfp972A2AW65 139 aa2.03□□□□□ -2.08
Trav17-202ENSMUST00000186545 Esp24A8R0V6 68 aa2.03□□□□□ -2.08
Trav17-202ENSMUST00000186545 Gm28048F7BCN0 99 aa2.03□□□□□ -2.08
Trav17-202ENSMUST00000186545 Gm10799F7C7U2 104 aa2.03□□□□□ -2.08
Trav17-202ENSMUST00000186545 Gm17455G3UW87 128 aa2.03□□□□□ -2.08
Trav17-202ENSMUST00000186545 Olfr1209Q3SXJ3 310 aa2.03□□□□□ -2.08
Trav17-202ENSMUST00000186545 Krtap9-3Q3V2C1 136 aa2.03□□□□□ -2.08
Trav17-202ENSMUST00000186545 Gm9958Q8C9U4 106 aa2.03□□□□□ -2.08
Trav17-202ENSMUST00000186545 Dpy30Q99LT0 99 aa2.03□□□□□ -2.08
Trav17-202ENSMUST00000186545 4930524J08RikQ9CUJ5 163 aa2.03□□□□□ -2.08
Trav17-202ENSMUST00000186545 9030624G23RikQ9D308 155 aa2.03□□□□□ -2.08
Trav17-202ENSMUST00000186545 Zcchc13Q9D548 170 aa2.03□□□□□ -2.08
Trav17-202ENSMUST00000186545 F5O88783 2183 aa2.03□□□□□ -2.08
Trav17-202ENSMUST00000186545 Myh1Q5SX40 1942 aa2.03□□□□□ -2.08
Trav17-202ENSMUST00000186545 Nup188Q6ZQH8 1759 aa2.03□□□□□ -2.09
Trav17-202ENSMUST00000186545 Arap2Q8BZ05 1703 aa2.03□□□□□ -2.09
Trav17-202ENSMUST00000186545 PkdrejQ9Z0T6 2126 aa2.02□□□□□ -2.09
Trav17-202ENSMUST00000186545 Igkv1-133A0A0B4J1H8 120 aa2.02□□□□□ -2.09
Trav17-202ENSMUST00000186545 Igkv17-127A0A0G2JDN5 117 aa2.02□□□□□ -2.09
Trav17-202ENSMUST00000186545 Oosp3G5E8D7 195 aa2.02□□□□□ -2.09
Trav17-202ENSMUST00000186545 Gm10553J3QPF1 123 aa2.02□□□□□ -2.09
Trav17-202ENSMUST00000186545 P01659 112 aa2.02□□□□□ -2.09
Trav17-202ENSMUST00000186545 P01755 137 aa2.02□□□□□ -2.09
Trav17-202ENSMUST00000186545 P01794 123 aa2.02□□□□□ -2.09
Trav17-202ENSMUST00000186545 Ccl9P51670 122 aa2.02□□□□□ -2.09
Trav17-202ENSMUST00000186545 Depp1Q8K2F3 205 aa2.02□□□□□ -2.09
Trav17-202ENSMUST00000186545 Q9CR34 168 aa2.02□□□□□ -2.09
Trav17-202ENSMUST00000186545 Nhp2Q9CRB2 153 aaKnown RBP2.02□□□□□ -2.09
Trav17-202ENSMUST00000186545 Tmem190Q9D2E9 166 aa2.02□□□□□ -2.09
Trav17-202ENSMUST00000186545 Btaf1E9QAE3 1848 aa2.02□□□□□ -2.09
Trav17-202ENSMUST00000186545 Togaram1Q6A070 1776 aaKnown RBP2.02□□□□□ -2.09
Trav17-202ENSMUST00000186545 BcorQ8CGN4 1759 aa2.02□□□□□ -2.09
Trav17-202ENSMUST00000186545 Phf3B2RQG2 2025 aaKnown RBP2.01□□□□□ -2.09
Trav17-202ENSMUST00000186545 Dlg5E9Q9R9 1921 aa2.01□□□□□ -2.09
Trav17-202ENSMUST00000186545 Myh7Q91Z83 1935 aa2.01□□□□□ -2.09
Trav17-202ENSMUST00000186545 Pde4dipQ80YT7 2224 aa2.01□□□□□ -2.09
Trav17-202ENSMUST00000186545 Ankrd31A0A140LI88 1765 aa2.01□□□□□ -2.09
Trav17-202ENSMUST00000186545 Casz1Q9CWL2 1761 aa2.01□□□□□ -2.09
Trav17-202ENSMUST00000186545 Gm21854A0A087WNM4 232 aa2.01□□□□□ -2.09
Trav17-202ENSMUST00000186545 Trav9-4A0A0B4J1K2 113 aa2.01□□□□□ -2.09
Trav17-202ENSMUST00000186545 Gm40193A0A1B0GT39 78 aa2.01□□□□□ -2.09
Trav17-202ENSMUST00000186545 OdaphJ3QNT8 126 aa2.01□□□□□ -2.09
Trav17-202ENSMUST00000186545 SncaO55042 140 aaKnown RBP2.01□□□□□ -2.09
Trav17-202ENSMUST00000186545 P06321 130 aa2.01□□□□□ -2.09
Trav17-202ENSMUST00000186545 Cstl1Q80Y72 140 aa2.01□□□□□ -2.09
Trav17-202ENSMUST00000186545 B230307C23RikQ8BLB2 64 aa2.01□□□□□ -2.09
Trav17-202ENSMUST00000186545 Alpk2Q91ZB0 2144 aa2.01□□□□□ -2.09
Trav17-202ENSMUST00000186545 Ecm29Q6PDI5 1840 aa2.01□□□□□ -2.09
Trav17-202ENSMUST00000186545 Ltn1Q6A009 1767 aa2□□□□□ -2.09
Trav17-202ENSMUST00000186545 Cacna1cQ01815 2139 aa2□□□□□ -2.09
Trav17-202ENSMUST00000186545 Ccdc88cQ6VGS5 2009 aa2□□□□□ -2.09
Trav17-202ENSMUST00000186545 Phrf1A6H619 1682 aa2□□□□□ -2.09
Trav17-202ENSMUST00000186545 Igkv1-88A0A140T8N1 120 aa2□□□□□ -2.09
Trav17-202ENSMUST00000186545 Sprr2jO70561 109 aa2□□□□□ -2.09
Trav17-202ENSMUST00000186545 Tcl1aP56280 116 aa2□□□□□ -2.09
Trav17-202ENSMUST00000186545 Ube2l3P68037 154 aaKnown RBP2□□□□□ -2.09
Trav17-202ENSMUST00000186545 Tnfsf18Q7TS55 173 aa2□□□□□ -2.09
Trav17-202ENSMUST00000186545 A730061H03RikQ8BGD2 154 aa2□□□□□ -2.09
Trav17-202ENSMUST00000186545 Spink2Q8BMY7 86 aa2□□□□□ -2.09
Trav17-202ENSMUST00000186545 Defb19Q8K3I8 83 aa2□□□□□ -2.09
Trav17-202ENSMUST00000186545 OtosQ8R448 89 aa2□□□□□ -2.09
Trav17-202ENSMUST00000186545 Gins1Q9CZ15 196 aa2□□□□□ -2.09
Trav17-202ENSMUST00000186545 Asf1bQ9DAP7 202 aa2□□□□□ -2.09
Trav17-202ENSMUST00000186545 Atoh7Q9Z2E5 149 aa2□□□□□ -2.09
Trav17-202ENSMUST00000186545 Col27a1Q5QNQ9 1845 aa2□□□□□ -2.09
Trav17-202ENSMUST00000186545 Myo5aQ99104 1853 aaKnown RBP1.99□□□□□ -2.09
Trav17-202ENSMUST00000186545 SptbP15508 2128 aa1.99□□□□□ -2.09
Trav17-202ENSMUST00000186545 Nup205A0A0J9YUD5 2061 aaKnown RBP1.99□□□□□ -2.09
Trav17-202ENSMUST00000186545 Igkv10-94A0A075B5L1 115 aa1.99□□□□□ -2.09
Trav17-202ENSMUST00000186545 Ighv1-58A0A075B5W9 117 aa1.99□□□□□ -2.09
Trav17-202ENSMUST00000186545 Ighv8-4A0A0A6YW26 117 aa1.99□□□□□ -2.09
Retrieved 100 of 22,080 RNA–protein pairs in 43.4 ms