RNA–Protein interactions for RNA: ENSMUST00000186545.1

Trav17-202, Transcript of T cell receptor alpha variable 17 (Fragment), mousemouse

APPRIS ALT2 BASIC

Gene Trav17, Length 338 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trav17-202ENSMUST00000186545 Chic1Q8CBW7 227 aa14.05□□□□□ -0.16
Trav17-202ENSMUST00000186545 Mapk8ip2Q9ERE9 830 aa13.32□□□□□ -0.28
Trav17-202ENSMUST00000186545 Phf23Q8BSN5 401 aa12.57□□□□□ -0.4
Trav17-202ENSMUST00000186545 Plppr3Q7TPB0 716 aa12.46□□□□□ -0.41
Trav17-202ENSMUST00000186545 Gab3Q8BSM5 595 aa12.22□□□□□ -0.45
Trav17-202ENSMUST00000186545 Senp3Q9EP97 568 aaKnown RBP11.66□□□□□ -0.54
Trav17-202ENSMUST00000186545 Kcna4Q61423 654 aa11.52□□□□□ -0.57
Trav17-202ENSMUST00000186545 Trap1aP19473 224 aa10.42□□□□□ -0.74
Trav17-202ENSMUST00000186545 Ppargc1bQ8VHJ7 1014 aa10.35□□□□□ -0.75
Trav17-202ENSMUST00000186545 Dmrt2Q8BG36 561 aa10.31□□□□□ -0.76
Trav17-202ENSMUST00000186545 Hoxd11P23813 323 aa10.19□□□□□ -0.78
Trav17-202ENSMUST00000186545 Slc4a1apE9PX68 744 aa10.11□□□□□ -0.79
Trav17-202ENSMUST00000186545 Chrna2Q91X60 512 aa9.82□□□□□ -0.84
Trav17-202ENSMUST00000186545 Ube2uB1AUC4 352 aa9.81□□□□□ -0.84
Trav17-202ENSMUST00000186545 Znf219Q6IQX8 726 aa9.8□□□□□ -0.84
Trav17-202ENSMUST00000186545 Fam163aQ8CAA5 168 aa9.8□□□□□ -0.84
Trav17-202ENSMUST00000186545 Rsph4aQ8BYM7 716 aa9.71□□□□□ -0.86
Trav17-202ENSMUST00000186545 Ppp4r2Q0VGB7 417 aa9.67□□□□□ -0.86
Trav17-202ENSMUST00000186545 Dnajc5bQ9CQ94 199 aa9.65□□□□□ -0.86
Trav17-202ENSMUST00000186545 Atf5O70191 283 aa9.64□□□□□ -0.87
Trav17-202ENSMUST00000186545 Hs6st3Q9QYK4 470 aa9.64□□□□□ -0.87
Trav17-202ENSMUST00000186545 1700123L14RikQ3V2K7 440 aa9.52□□□□□ -0.89
Trav17-202ENSMUST00000186545 Rimbp2Q80U40 1072 aa9.5□□□□□ -0.89
Trav17-202ENSMUST00000186545 Fam71e1A1L3C1 212 aa9.44□□□□□ -0.9
Trav17-202ENSMUST00000186545 Nlrp6Q91WS2 869 aa9.25□□□□□ -0.93
Trav17-202ENSMUST00000186545 Akt1s1Q9D1F4 257 aa9.23□□□□□ -0.93
Trav17-202ENSMUST00000186545 AcrbpQ3V140 540 aa9.21□□□□□ -0.94
Trav17-202ENSMUST00000186545 ArsiQ32KI9 573 aa9.19□□□□□ -0.94
Trav17-202ENSMUST00000186545 Cdca7Q9D0M2 382 aa9.17□□□□□ -0.94
Trav17-202ENSMUST00000186545 Bach1P97302 739 aa9.15□□□□□ -0.94
Trav17-202ENSMUST00000186545 Slc34a2Q9DBP0 697 aa9.11□□□□□ -0.95
Trav17-202ENSMUST00000186545 Pde4cQ3UEI1 686 aa9.08□□□□□ -0.96
Trav17-202ENSMUST00000186545 Sox12Q04890 314 aa9.05□□□□□ -0.96
Trav17-202ENSMUST00000186545 Rtn4Q99P72 1162 aaKnown RBP9.03□□□□□ -0.96
Trav17-202ENSMUST00000186545 Prm3Q62100 101 aa9.02□□□□□ -0.97
Trav17-202ENSMUST00000186545 WdpcpQ8C456 722 aa8.99□□□□□ -0.97
Trav17-202ENSMUST00000186545 Npm2Q80W85 207 aa8.98□□□□□ -0.97
Trav17-202ENSMUST00000186545 Ehmt2Q9Z148 1263 aaKnown RBP8.98□□□□□ -0.97
Trav17-202ENSMUST00000186545 C1qtnf12Q8R2Z0 308 aa8.96□□□□□ -0.98
Trav17-202ENSMUST00000186545 Riok3Q9DBU3 519 aaKnown RBP8.9□□□□□ -0.98
Trav17-202ENSMUST00000186545 MyclP10166 368 aa8.89□□□□□ -0.99
Trav17-202ENSMUST00000186545 Tshz2Q68FE9 1030 aa8.84□□□□□ -0.99
Trav17-202ENSMUST00000186545 Trim41Q5NCC3 630 aa8.8□□□□□ -1
Trav17-202ENSMUST00000186545 Styxl1Q9DAR2 321 aa8.77□□□□□ -1.01
Trav17-202ENSMUST00000186545 Ifnlr1Q8CGK5 535 aa8.74□□□□□ -1.01
Trav17-202ENSMUST00000186545 G430095P16RikE9Q913 147 aa8.68□□□□□ -1.02
Trav17-202ENSMUST00000186545 Ms4a5Q810P8 197 aa8.64□□□□□ -1.03
Trav17-202ENSMUST00000186545 Ecm2Q5FW85 670 aa8.58□□□□□ -1.04
Trav17-202ENSMUST00000186545 Zbtb12Q9Z150 459 aa8.55□□□□□ -1.04
Trav17-202ENSMUST00000186545 Egfem1Q8C088 590 aa8.52□□□□□ -1.05
Trav17-202ENSMUST00000186545 Zbtb7aO88939 569 aaKnown RBP8.5□□□□□ -1.05
Trav17-202ENSMUST00000186545 Grwd1Q810D6 446 aaKnown RBP8.5□□□□□ -1.05
Trav17-202ENSMUST00000186545 Prdm10Q3UTQ7 1184 aa8.49□□□□□ -1.05
Trav17-202ENSMUST00000186545 Rnf216P58283 853 aa8.43□□□□□ -1.06
Trav17-202ENSMUST00000186545 Tcf3P15806 651 aa8.4□□□□□ -1.06
Trav17-202ENSMUST00000186545 MpndQ3TV65 487 aa8.38□□□□□ -1.07
Trav17-202ENSMUST00000186545 Fbln2P37889 1221 aa8.37□□□□□ -1.07
Trav17-202ENSMUST00000186545 Gtpbp6Q3U6U5 514 aa8.37□□□□□ -1.07
Trav17-202ENSMUST00000186545 Abcb7Q61102 752 aaKnown RBP8.35□□□□□ -1.07
Trav17-202ENSMUST00000186545 Npm3Q9CPP0 175 aaKnown RBP8.31□□□□□ -1.08
Trav17-202ENSMUST00000186545 Skida1Q80YR3 822 aa8.28□□□□□ -1.08
Trav17-202ENSMUST00000186545 CatipB9EKE5 520 aa8.25□□□□□ -1.09
Trav17-202ENSMUST00000186545 Nkx1-1G3UXB3 402 aa8.25□□□□□ -1.09
Trav17-202ENSMUST00000186545 Znf704Q9ERQ3 566 aa8.25□□□□□ -1.09
Trav17-202ENSMUST00000186545 Slc4a5E9Q3M5 1116 aa8.2□□□□□ -1.1
Trav17-202ENSMUST00000186545 Ppp1r37Q8BKR5 712 aa8.19□□□□□ -1.1
Trav17-202ENSMUST00000186545 Lrrc43Q3V0L5 667 aa8.07□□□□□ -1.12
Trav17-202ENSMUST00000186545 Spock2Q9ER58 423 aa8.03□□□□□ -1.12
Trav17-202ENSMUST00000186545 MycnP03966 462 aaKnown RBP8.02□□□□□ -1.13
Trav17-202ENSMUST00000186545 Jarid2Q62315 1234 aa8□□□□□ -1.13
Trav17-202ENSMUST00000186545 Hnrnpul2Q00PI9 745 aaKnown RBP7.93□□□□□ -1.14
Trav17-202ENSMUST00000186545 Ppp6r1Q7TSI3 856 aa7.93□□□□□ -1.14
Trav17-202ENSMUST00000186545 Hdac5Q9Z2V6 1113 aa7.93□□□□□ -1.14
Trav17-202ENSMUST00000186545 Taok2Q6ZQ29 1240 aa7.9□□□□□ -1.14
Trav17-202ENSMUST00000186545 Slc24a1Q91WD8 1130 aa7.9□□□□□ -1.14
Trav17-202ENSMUST00000186545 Prdm16A2A935 1275 aa7.85□□□□□ -1.15
Trav17-202ENSMUST00000186545 Arid3aQ62431 601 aa7.85□□□□□ -1.15
Trav17-202ENSMUST00000186545 Zbtb22Q9Z0G7 638 aa7.85□□□□□ -1.15
Trav17-202ENSMUST00000186545 Pitpnm1O35954 1243 aa7.84□□□□□ -1.15
Trav17-202ENSMUST00000186545 Ferd3lQ923Z4 168 aa7.84□□□□□ -1.15
Trav17-202ENSMUST00000186545 Skap1Q3UUV5 355 aa7.83□□□□□ -1.16
Trav17-202ENSMUST00000186545 Cadps2Q8BYR5 1297 aa7.83□□□□□ -1.16
Trav17-202ENSMUST00000186545 Sra1Q80VJ2 232 aa7.82□□□□□ -1.16
Trav17-202ENSMUST00000186545 Gm13697A2AK42 830 aa7.81□□□□□ -1.16
Trav17-202ENSMUST00000186545 Fam117bQ3U3E2 584 aa7.81□□□□□ -1.16
Trav17-202ENSMUST00000186545 Pde4dQ01063 747 aa7.79□□□□□ -1.16
Trav17-202ENSMUST00000186545 Kcnn1Q9EQR3 537 aa7.79□□□□□ -1.16
Trav17-202ENSMUST00000186545 Nyap1Q6PFX7 833 aa7.77□□□□□ -1.17
Trav17-202ENSMUST00000186545 Trim35Q8C006 501 aa7.77□□□□□ -1.17
Trav17-202ENSMUST00000186545 TimelessQ9R1X4 1197 aa7.77□□□□□ -1.17
Trav17-202ENSMUST00000186545 Repin1Q5U4E2 545 aa7.75□□□□□ -1.17
Trav17-202ENSMUST00000186545 Slc4a2P13808 1237 aaKnown RBP7.73□□□□□ -1.17
Trav17-202ENSMUST00000186545 Rsph6aQ8CDR2 708 aa7.73□□□□□ -1.17
Trav17-202ENSMUST00000186545 Prr29B1ARI9 187 aa7.72□□□□□ -1.17
Trav17-202ENSMUST00000186545 Zeb1Q64318 1117 aa7.71□□□□□ -1.18
Trav17-202ENSMUST00000186545 Pdap1Q3UHX2 181 aaKnown RBP7.68□□□□□ -1.18
Trav17-202ENSMUST00000186545 Zbtb7bQ64321 544 aa7.68□□□□□ -1.18
Trav17-202ENSMUST00000186545 Kank3Q9Z1P7 791 aa7.68□□□□□ -1.18
Trav17-202ENSMUST00000186545 P3h3Q8CG70 732 aa7.67□□□□□ -1.18
Trav17-202ENSMUST00000186545 Clcn6O35454 870 aa7.66□□□□□ -1.18
Retrieved 100 of 22,080 RNA–protein pairs in 240.5 ms