Protein–RNA interactions for Protein: A0A0B4J1H7

Igkv1-135, Immunoglobulin kappa variable 1-135 (Fragment), mousemouse

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv1-135A0A0B4J1H7 Gm25239-201ENSMUST00000174915 86 ntBASIC30.19■■■□□ 2.42
Igkv1-135A0A0B4J1H7 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC28.99■■■□□ 2.23
Igkv1-135A0A0B4J1H7 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
Igkv1-135A0A0B4J1H7 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC27.94■■■□□ 2.06
Igkv1-135A0A0B4J1H7 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC27.67■■■□□ 2.02
Igkv1-135A0A0B4J1H7 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
Igkv1-135A0A0B4J1H7 Psd-208ENSMUST00000224556 2034 ntBASIC26.99■■□□□ 1.91
Igkv1-135A0A0B4J1H7 Gm15042-201ENSMUST00000120212 883 ntBASIC26.93■■□□□ 1.9
Igkv1-135A0A0B4J1H7 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
Igkv1-135A0A0B4J1H7 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC26.42■■□□□ 1.82
Igkv1-135A0A0B4J1H7 Gm15045-201ENSMUST00000117359 883 ntBASIC26.41■■□□□ 1.82
Igkv1-135A0A0B4J1H7 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Igkv1-135A0A0B4J1H7 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Igkv1-135A0A0B4J1H7 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC26.19■■□□□ 1.78
Igkv1-135A0A0B4J1H7 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
Igkv1-135A0A0B4J1H7 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
Igkv1-135A0A0B4J1H7 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
Igkv1-135A0A0B4J1H7 Gm24109-201ENSMUST00000175489 103 ntBASIC25.91■■□□□ 1.74
Igkv1-135A0A0B4J1H7 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
Igkv1-135A0A0B4J1H7 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
Igkv1-135A0A0B4J1H7 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC25.74■■□□□ 1.71
Igkv1-135A0A0B4J1H7 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC25.58■■□□□ 1.69
Igkv1-135A0A0B4J1H7 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
Igkv1-135A0A0B4J1H7 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC25.57■■□□□ 1.68
Igkv1-135A0A0B4J1H7 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC25.52■■□□□ 1.68
Igkv1-135A0A0B4J1H7 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC25.43■■□□□ 1.66
Igkv1-135A0A0B4J1H7 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC25.41■■□□□ 1.66
Igkv1-135A0A0B4J1H7 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Igkv1-135A0A0B4J1H7 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC25.32■■□□□ 1.64
Igkv1-135A0A0B4J1H7 Gm23366-201ENSMUST00000175022 89 ntBASIC25.29■■□□□ 1.64
Igkv1-135A0A0B4J1H7 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
Igkv1-135A0A0B4J1H7 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC25.21■■□□□ 1.63
Igkv1-135A0A0B4J1H7 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC25.17■■□□□ 1.62
Igkv1-135A0A0B4J1H7 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
Igkv1-135A0A0B4J1H7 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
Igkv1-135A0A0B4J1H7 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
Igkv1-135A0A0B4J1H7 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Igkv1-135A0A0B4J1H7 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Igkv1-135A0A0B4J1H7 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
Igkv1-135A0A0B4J1H7 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC24.98■■□□□ 1.59
Igkv1-135A0A0B4J1H7 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC24.77■■□□□ 1.56
Igkv1-135A0A0B4J1H7 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC24.75■■□□□ 1.55
Igkv1-135A0A0B4J1H7 AC153911.1-202ENSMUST00000218534 1034 ntBASIC24.75■■□□□ 1.55
Igkv1-135A0A0B4J1H7 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC24.74■■□□□ 1.55
Igkv1-135A0A0B4J1H7 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC24.72■■□□□ 1.55
Igkv1-135A0A0B4J1H7 Gm10524-201ENSMUST00000181931 1893 ntBASIC24.64■■□□□ 1.54
Igkv1-135A0A0B4J1H7 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC24.64■■□□□ 1.53
Igkv1-135A0A0B4J1H7 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Igkv1-135A0A0B4J1H7 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Igkv1-135A0A0B4J1H7 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
Igkv1-135A0A0B4J1H7 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Igkv1-135A0A0B4J1H7 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Igkv1-135A0A0B4J1H7 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC24.23■■□□□ 1.47
Igkv1-135A0A0B4J1H7 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Igkv1-135A0A0B4J1H7 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
Igkv1-135A0A0B4J1H7 CT025624.2-201ENSMUST00000223609 1909 ntBASIC24.12■■□□□ 1.45
Igkv1-135A0A0B4J1H7 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
Igkv1-135A0A0B4J1H7 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC24.05■■□□□ 1.44
Igkv1-135A0A0B4J1H7 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC24.04■■□□□ 1.44
Igkv1-135A0A0B4J1H7 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Igkv1-135A0A0B4J1H7 Gm42596-201ENSMUST00000196305 1958 ntBASIC23.96■■□□□ 1.43
Igkv1-135A0A0B4J1H7 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC23.96■■□□□ 1.43
Igkv1-135A0A0B4J1H7 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC23.95■■□□□ 1.42
Igkv1-135A0A0B4J1H7 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Igkv1-135A0A0B4J1H7 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC23.91■■□□□ 1.42
Igkv1-135A0A0B4J1H7 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC23.86■■□□□ 1.41
Igkv1-135A0A0B4J1H7 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Igkv1-135A0A0B4J1H7 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Igkv1-135A0A0B4J1H7 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC23.81■■□□□ 1.4
Igkv1-135A0A0B4J1H7 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Igkv1-135A0A0B4J1H7 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC23.78■■□□□ 1.4
Igkv1-135A0A0B4J1H7 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Igkv1-135A0A0B4J1H7 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC23.77■■□□□ 1.4
Igkv1-135A0A0B4J1H7 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Igkv1-135A0A0B4J1H7 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Igkv1-135A0A0B4J1H7 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC23.68■■□□□ 1.38
Igkv1-135A0A0B4J1H7 Gm27325-201ENSMUST00000175467 74 ntBASIC23.67■■□□□ 1.38
Igkv1-135A0A0B4J1H7 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Igkv1-135A0A0B4J1H7 Gm25238-201ENSMUST00000174914 89 ntBASIC23.65■■□□□ 1.38
Igkv1-135A0A0B4J1H7 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
Igkv1-135A0A0B4J1H7 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC23.64■■□□□ 1.37
Igkv1-135A0A0B4J1H7 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Igkv1-135A0A0B4J1H7 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC23.57■■□□□ 1.36
Igkv1-135A0A0B4J1H7 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Igkv1-135A0A0B4J1H7 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Igkv1-135A0A0B4J1H7 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC23.45■■□□□ 1.34
Igkv1-135A0A0B4J1H7 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Igkv1-135A0A0B4J1H7 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Igkv1-135A0A0B4J1H7 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Igkv1-135A0A0B4J1H7 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Igkv1-135A0A0B4J1H7 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Igkv1-135A0A0B4J1H7 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
Igkv1-135A0A0B4J1H7 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Igkv1-135A0A0B4J1H7 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Igkv1-135A0A0B4J1H7 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC23.34■■□□□ 1.33
Igkv1-135A0A0B4J1H7 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Igkv1-135A0A0B4J1H7 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
Igkv1-135A0A0B4J1H7 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Igkv1-135A0A0B4J1H7 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Igkv1-135A0A0B4J1H7 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms