RNA–Protein interactions for RNA: ENSMUST00000100942.8

Vamp1-203, Transcript of Vesicle-associated membrane protein 1, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Vamp1, Length 3,011 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vamp1-203ENSMUST00000100942 Srsf9Q9D0B0 222 aaKnown RBP9.26□□□□□ -0.93
Vamp1-203ENSMUST00000100942 FlncQ8VHX6 2726 aaKnown RBP9.26□□□□□ -0.93
Vamp1-203ENSMUST00000100942 Igkv4-81A0A0G2JEY5 119 aa9.26□□□□□ -0.93
Vamp1-203ENSMUST00000100942 P01837 106 aa9.26□□□□□ -0.93
Vamp1-203ENSMUST00000100942 Rpl32P62911 135 aaKnown RBP9.26□□□□□ -0.93
Vamp1-203ENSMUST00000100942 Gm10735Q3US96 136 aa9.26□□□□□ -0.93
Vamp1-203ENSMUST00000100942 Gm16223Q8CBM3 117 aa9.26□□□□□ -0.93
Vamp1-203ENSMUST00000100942 Cysltr1Q99JA4 352 aa9.26□□□□□ -0.93
Vamp1-203ENSMUST00000100942 Nat8b-psE0CYC6 232 aa9.25□□□□□ -0.93
Vamp1-203ENSMUST00000100942 Gm28038F7BCN9 126 aa9.25□□□□□ -0.93
Vamp1-203ENSMUST00000100942 Gm10226O88253 85 aa9.25□□□□□ -0.93
Vamp1-203ENSMUST00000100942 Tac4Q99N14 128 aa9.25□□□□□ -0.93
Vamp1-203ENSMUST00000100942 Gemin7Q9CWY4 129 aa9.25□□□□□ -0.93
Vamp1-203ENSMUST00000100942 Plac1Q9JI83 173 aa9.25□□□□□ -0.93
Vamp1-203ENSMUST00000100942 Abca12E9Q876 2595 aa9.25□□□□□ -0.93
Vamp1-203ENSMUST00000100942 Abca2P41234 2434 aa9.25□□□□□ -0.93
Vamp1-203ENSMUST00000100942 Ighv14-1A0A075B5R4 117 aa9.24□□□□□ -0.93
Vamp1-203ENSMUST00000100942 1520401A03RikA0A0J9YVH6 598 aa9.24□□□□□ -0.93
Vamp1-203ENSMUST00000100942 Gm12845A0A0N4SUM5 588 aa9.24□□□□□ -0.93
Vamp1-203ENSMUST00000100942 Gm10521E9PZK0 135 aa9.24□□□□□ -0.93
Vamp1-203ENSMUST00000100942 Foxi1Q922I5 372 aa9.24□□□□□ -0.93
Vamp1-203ENSMUST00000100942 Zc2hc1bQ9D534 172 aa9.24□□□□□ -0.93
Vamp1-203ENSMUST00000100942 Snai3Q9QY31 287 aa9.24□□□□□ -0.93
Vamp1-203ENSMUST00000100942 Ndufa4l2Q4FZG9 87 aa9.24□□□□□ -0.93
Vamp1-203ENSMUST00000100942 Ifi27l2aQ8R412 90 aa9.24□□□□□ -0.93
Vamp1-203ENSMUST00000100942 Znf580Q9DB38 172 aa9.24□□□□□ -0.93
Vamp1-203ENSMUST00000100942 Igkv2-137A0A0B4J1H6 120 aa9.23□□□□□ -0.93
Vamp1-203ENSMUST00000100942 Gm9913Q8BQQ2 135 aa9.23□□□□□ -0.93
Vamp1-203ENSMUST00000100942 Notch3Q61982 2318 aa9.23□□□□□ -0.93
Vamp1-203ENSMUST00000100942 Fam240aJ3QNP9 97 aa9.23□□□□□ -0.93
Vamp1-203ENSMUST00000100942 Usmg5Q78IK2 58 aa9.23□□□□□ -0.93
Vamp1-203ENSMUST00000100942 Rpl11Q9CXW4 178 aaKnown RBP9.23□□□□□ -0.93
Vamp1-203ENSMUST00000100942 Csn3P06796 181 aa9.23□□□□□ -0.93
Vamp1-203ENSMUST00000100942 Atp5eP56382 52 aa9.23□□□□□ -0.93
Vamp1-203ENSMUST00000100942 Gm42674D3YUT9 64 aa9.22□□□□□ -0.93
Vamp1-203ENSMUST00000100942 Hspe1Q64433 102 aaKnown RBP9.22□□□□□ -0.93
Vamp1-203ENSMUST00000100942 Rab37Q9JKM7 223 aa9.22□□□□□ -0.93
Vamp1-203ENSMUST00000100942 Gm26938S4R185 226 aa9.22□□□□□ -0.93
Vamp1-203ENSMUST00000100942 Tep1P97499 2629 aa9.22□□□□□ -0.93
Vamp1-203ENSMUST00000100942 Igkv4-57-1A0A075B5M4 119 aa9.22□□□□□ -0.93
Vamp1-203ENSMUST00000100942 Ighv1-23A0A0A6YVW3 117 aa9.22□□□□□ -0.93
Vamp1-203ENSMUST00000100942 Tmem170bP86050 132 aa9.22□□□□□ -0.93
Vamp1-203ENSMUST00000100942 Il1f10Q8R459 152 aa9.22□□□□□ -0.93
Vamp1-203ENSMUST00000100942 Dpm3Q9D1Q4 92 aa9.22□□□□□ -0.93
Vamp1-203ENSMUST00000100942 Pradc1Q9D9N8 188 aa9.22□□□□□ -0.93
Vamp1-203ENSMUST00000100942 Psmb8P28063 276 aa9.21□□□□□ -0.93
Vamp1-203ENSMUST00000100942 Odf1Q61999 247 aa9.21□□□□□ -0.93
Vamp1-203ENSMUST00000100942 Gkn1Q9CR36 201 aa9.21□□□□□ -0.93
Vamp1-203ENSMUST00000100942 Ighv1-80A0A075B5Y3 117 aa9.21□□□□□ -0.94
Vamp1-203ENSMUST00000100942 Umad1E0CX23 159 aa9.21□□□□□ -0.94
Vamp1-203ENSMUST00000100942 Gm21994F6T2D2 329 aa9.21□□□□□ -0.94
Vamp1-203ENSMUST00000100942 SmcpP15265 143 aa9.21□□□□□ -0.94
Vamp1-203ENSMUST00000100942 Gm9961Q8BNV2 113 aa9.21□□□□□ -0.94
Vamp1-203ENSMUST00000100942 Dpm2Q9Z324 84 aa9.21□□□□□ -0.94
Vamp1-203ENSMUST00000100942 Zfp248Q640N4 576 aa9.21□□□□□ -0.94
Vamp1-203ENSMUST00000100942 Gm1553Q66VB7 94 aa9.21□□□□□ -0.94
Vamp1-203ENSMUST00000100942 Muc2Q80Z19 2680 aa9.21□□□□□ -0.94
Vamp1-203ENSMUST00000100942 Ankrd11E9Q4F7 2643 aa9.2□□□□□ -0.94
Vamp1-203ENSMUST00000100942 Trav4n-4A0A075B615 110 aa9.2□□□□□ -0.94
Vamp1-203ENSMUST00000100942 Gm11444F6QMA6 170 aa9.2□□□□□ -0.94
Vamp1-203ENSMUST00000100942 Gm10271F6WY25 52 aa9.2□□□□□ -0.94
Vamp1-203ENSMUST00000100942 Bri3P28662 125 aa9.2□□□□□ -0.94
Vamp1-203ENSMUST00000100942 P01812 117 aa9.2□□□□□ -0.94
Vamp1-203ENSMUST00000100942 Fhl1P97447 280 aaKnown RBP9.2□□□□□ -0.94
Vamp1-203ENSMUST00000100942 Morn3Q8C5T4 241 aa9.2□□□□□ -0.94
Vamp1-203ENSMUST00000100942 Lgals4Q8K419 326 aa9.2□□□□□ -0.94
Vamp1-203ENSMUST00000100942 S100a4P07091 101 aa9.19□□□□□ -0.94
Vamp1-203ENSMUST00000100942 Mllt11P97783 90 aa9.19□□□□□ -0.94
Vamp1-203ENSMUST00000100942 Chd9Q8BYH8 2885 aa9.19□□□□□ -0.94
Vamp1-203ENSMUST00000100942 Trav6-4A0A075B6B4 115 aa9.19□□□□□ -0.94
Vamp1-203ENSMUST00000100942 Igkv4-70A0A0B4J1I5 116 aa9.19□□□□□ -0.94
Vamp1-203ENSMUST00000100942 Rpl13aP19253 203 aaKnown RBP9.19□□□□□ -0.94
Vamp1-203ENSMUST00000100942 Psmb11Q8BG41 302 aa9.19□□□□□ -0.94
Vamp1-203ENSMUST00000100942 Gpr82Q8BZR0 328 aa9.19□□□□□ -0.94
Vamp1-203ENSMUST00000100942 Ormdl2Q9CQZ0 153 aa9.19□□□□□ -0.94
Vamp1-203ENSMUST00000100942 Q9DAB9 146 aa9.19□□□□□ -0.94
Vamp1-203ENSMUST00000100942 PkigO70139 76 aa9.18□□□□□ -0.94
Vamp1-203ENSMUST00000100942 Cdx4Q07424 282 aa9.18□□□□□ -0.94
Vamp1-203ENSMUST00000100942 Q4KKZ1 196 aa9.18□□□□□ -0.94
Vamp1-203ENSMUST00000100942 Q9D8Q6 235 aa9.18□□□□□ -0.94
Vamp1-203ENSMUST00000100942 Lyrm7Q9DA03 104 aa9.18□□□□□ -0.94
Vamp1-203ENSMUST00000100942 Igkv20-101-2A0A0G2JDU3 113 aa9.18□□□□□ -0.94
Vamp1-203ENSMUST00000100942 Ang5Q5GAN1 145 aa9.18□□□□□ -0.94
Vamp1-203ENSMUST00000100942 Olfr312Q7TRZ9 308 aa9.18□□□□□ -0.94
Vamp1-203ENSMUST00000100942 Ighv1-82A0A0G2JEU7 117 aa9.18□□□□□ -0.94
Vamp1-203ENSMUST00000100942 Gm904Q3V2L5 102 aa9.18□□□□□ -0.94
Vamp1-203ENSMUST00000100942 Trav19A0A0B4J1K4 119 aa9.17□□□□□ -0.94
Vamp1-203ENSMUST00000100942 Igkv4-71A0A0G2JEH0 117 aa9.17□□□□□ -0.94
Vamp1-203ENSMUST00000100942 Ighv1-62-3P01754 117 aa9.17□□□□□ -0.94
Vamp1-203ENSMUST00000100942 Lrcol1Q3URS3 161 aa9.17□□□□□ -0.94
Vamp1-203ENSMUST00000100942 Ss18l2Q9D174 77 aa9.17□□□□□ -0.94
Vamp1-203ENSMUST00000100942 AY761184Q9D848 116 aa9.17□□□□□ -0.94
Vamp1-203ENSMUST00000100942 Ighv3-8A0A075B5T0 131 aa9.17□□□□□ -0.94
Vamp1-203ENSMUST00000100942 P01739 132 aa9.17□□□□□ -0.94
Vamp1-203ENSMUST00000100942 4930596D02RikQ3V0H9 216 aa9.17□□□□□ -0.94
Vamp1-203ENSMUST00000100942 Cyyr1Q8VIH7 165 aa9.17□□□□□ -0.94
Vamp1-203ENSMUST00000100942 MsmbO08540 113 aa9.16□□□□□ -0.94
Vamp1-203ENSMUST00000100942 Ankhd1E9PUR0 2548 aaKnown RBP9.16□□□□□ -0.94
Vamp1-203ENSMUST00000100942 Celsr2Q9R0M0 2920 aa9.16□□□□□ -0.94
Vamp1-203ENSMUST00000100942 Ighv1-9A0A0A6YW37 117 aa9.15□□□□□ -0.94
Retrieved 100 of 22,080 RNA–protein pairs in 55 ms