RNA–Protein interactions for RNA: ENSMUST00000071588.7

Nkx6-3-201, Transcript of Homeobox protein Nkx-6.3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nkx6-3, Length 2,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-3-201ENSMUST00000071588 Ighv1-81A0A075B5Y4 117 aa10.23□□□□□ -0.77
Nkx6-3-201ENSMUST00000071588 Ighv3-4A0A0A6YXF1 117 aa10.23□□□□□ -0.77
Nkx6-3-201ENSMUST00000071588 Gm933J3QPC1 141 aa10.23□□□□□ -0.77
Nkx6-3-201ENSMUST00000071588 BokO35425 213 aa10.23□□□□□ -0.77
Nkx6-3-201ENSMUST00000071588 Tmem95P0DJF3 176 aa10.23□□□□□ -0.77
Nkx6-3-201ENSMUST00000071588 Sdhaf1Q3U276 118 aa10.23□□□□□ -0.77
Nkx6-3-201ENSMUST00000071588 Fam216bQ8CC14 138 aa10.23□□□□□ -0.77
Nkx6-3-201ENSMUST00000071588 Mrpl16Q99N93 251 aa10.23□□□□□ -0.77
Nkx6-3-201ENSMUST00000071588 LystP97412 3788 aa10.22□□□□□ -0.77
Nkx6-3-201ENSMUST00000071588 Trav19A0A0B4J1K4 119 aa10.22□□□□□ -0.77
Nkx6-3-201ENSMUST00000071588 C920008G01RikA0A0B4J1N1 112 aa10.22□□□□□ -0.77
Nkx6-3-201ENSMUST00000071588 Onecut1O08755 465 aa10.22□□□□□ -0.77
Nkx6-3-201ENSMUST00000071588 Defa16P50714 93 aa10.22□□□□□ -0.77
Nkx6-3-201ENSMUST00000071588 P84751 237 aa10.22□□□□□ -0.77
Nkx6-3-201ENSMUST00000071588 Defa26Q3L180 93 aa10.22□□□□□ -0.77
Nkx6-3-201ENSMUST00000071588 Olfr313Q5NC55 308 aa10.22□□□□□ -0.77
Nkx6-3-201ENSMUST00000071588 Prss58Q8BW11 241 aa10.22□□□□□ -0.77
Nkx6-3-201ENSMUST00000071588 Gm26566Q8CAC1 153 aa10.22□□□□□ -0.77
Nkx6-3-201ENSMUST00000071588 Tmem101Q91VP7 257 aa10.22□□□□□ -0.77
Nkx6-3-201ENSMUST00000071588 Parm1Q923D3 296 aa10.22□□□□□ -0.77
Nkx6-3-201ENSMUST00000071588 PmvkQ9D1G2 192 aa10.22□□□□□ -0.77
Nkx6-3-201ENSMUST00000071588 Col6a4A2AX52 2309 aa10.22□□□□□ -0.77
Nkx6-3-201ENSMUST00000071588 Rnf182Q8C432 247 aa10.22□□□□□ -0.77
Nkx6-3-201ENSMUST00000071588 Sumo2P61957 95 aaKnown RBP10.21□□□□□ -0.77
Nkx6-3-201ENSMUST00000071588 Cdx4Q07424 282 aa10.21□□□□□ -0.77
Nkx6-3-201ENSMUST00000071588 Svs5P30933 122 aa10.21□□□□□ -0.78
Nkx6-3-201ENSMUST00000071588 Gm5105Q8C6Y9 112 aa10.21□□□□□ -0.78
Nkx6-3-201ENSMUST00000071588 Arid1bE9Q4N7 2244 aa10.2□□□□□ -0.78
Nkx6-3-201ENSMUST00000071588 P04219 140 aa10.2□□□□□ -0.78
Nkx6-3-201ENSMUST00000071588 Gm5629P06327 117 aa10.2□□□□□ -0.78
Nkx6-3-201ENSMUST00000071588 Khdc1cQ4KL78 166 aa10.2□□□□□ -0.78
Nkx6-3-201ENSMUST00000071588 Gm6040Q4QY32 63 aa10.2□□□□□ -0.78
Nkx6-3-201ENSMUST00000071588 Zfp248Q640N4 576 aa10.2□□□□□ -0.78
Nkx6-3-201ENSMUST00000071588 Gm10118Q8C8J5 116 aa10.2□□□□□ -0.78
Nkx6-3-201ENSMUST00000071588 Obox8V9GWY9 217 aa10.19□□□□□ -0.78
Nkx6-3-201ENSMUST00000071588 Svep1A2AVA0 3567 aa10.19□□□□□ -0.78
Nkx6-3-201ENSMUST00000071588 Utp20Q5XG71 2788 aaKnown RBP10.19□□□□□ -0.78
Nkx6-3-201ENSMUST00000071588 Ighv7-3A0A075B5R2 120 aa10.19□□□□□ -0.78
Nkx6-3-201ENSMUST00000071588 Igkv2-137A0A0B4J1H6 120 aa10.19□□□□□ -0.78
Nkx6-3-201ENSMUST00000071588 TtrP07309 147 aa10.19□□□□□ -0.78
Nkx6-3-201ENSMUST00000071588 4930432M17RikQ3V0W9 174 aa10.19□□□□□ -0.78
Nkx6-3-201ENSMUST00000071588 Trav7-6A0A075B640 112 aa10.18□□□□□ -0.78
Nkx6-3-201ENSMUST00000071588 Ccl21aP84444 133 aa10.18□□□□□ -0.78
Nkx6-3-201ENSMUST00000071588 Ccl21bP86792 133 aa10.18□□□□□ -0.78
Nkx6-3-201ENSMUST00000071588 Ccl21cP86793 133 aa10.18□□□□□ -0.78
Nkx6-3-201ENSMUST00000071588 Gm10767Q3TQP0 103 aa10.18□□□□□ -0.78
Nkx6-3-201ENSMUST00000071588 Defa25Q5G864 92 aa10.18□□□□□ -0.78
Nkx6-3-201ENSMUST00000071588 E130116L18RikQ8BMV6 101 aa10.18□□□□□ -0.78
Nkx6-3-201ENSMUST00000071588 Spink6Q8BT20 105 aa10.18□□□□□ -0.78
Nkx6-3-201ENSMUST00000071588 Ighv1-52A0A0A6YXC3 117 aa10.18□□□□□ -0.78
Nkx6-3-201ENSMUST00000071588 P01748 117 aa10.18□□□□□ -0.78
Nkx6-3-201ENSMUST00000071588 Rps28P62858 69 aaKnown RBP10.18□□□□□ -0.78
Nkx6-3-201ENSMUST00000071588 Gm17334Q8C6U3 126 aa10.18□□□□□ -0.78
Nkx6-3-201ENSMUST00000071588 Mast4Q811L6 2618 aa10.18□□□□□ -0.78
Nkx6-3-201ENSMUST00000071588 Col7a1Q63870 2944 aa10.17□□□□□ -0.78
Nkx6-3-201ENSMUST00000071588 FlncQ8VHX6 2726 aaKnown RBP10.17□□□□□ -0.78
Nkx6-3-201ENSMUST00000071588 Ighv1-31A0A0A6YWK5 117 aa10.17□□□□□ -0.78
Nkx6-3-201ENSMUST00000071588 Igkv4-71A0A0G2JEH0 117 aa10.17□□□□□ -0.78
Nkx6-3-201ENSMUST00000071588 Ighv1-77A0A0G2JGS9 117 aa10.17□□□□□ -0.78
Nkx6-3-201ENSMUST00000071588 Ifitm10Q8BR26 201 aa10.17□□□□□ -0.78
Nkx6-3-201ENSMUST00000071588 Mrpl33Q9CQP0 65 aa10.17□□□□□ -0.78
Nkx6-3-201ENSMUST00000071588 Pygo1Q9D0P5 417 aa10.17□□□□□ -0.78
Nkx6-3-201ENSMUST00000071588 Ighv5-6A0A075B5Q0 117 aa10.17□□□□□ -0.78
Nkx6-3-201ENSMUST00000071588 Ighv4-1A0A075B5R5 116 aa10.17□□□□□ -0.78
Nkx6-3-201ENSMUST00000071588 Gm3618D3Z4P5 127 aa10.17□□□□□ -0.78
Nkx6-3-201ENSMUST00000071588 Tmem14cQ9CQN6 114 aa10.17□□□□□ -0.78
Nkx6-3-201ENSMUST00000071588 Gm2916Q9D9B9 127 aa10.17□□□□□ -0.78
Nkx6-3-201ENSMUST00000071588 Esm1Q9QYY7 184 aa10.17□□□□□ -0.78
Nkx6-3-201ENSMUST00000071588 Prrc2aQ7TSC1 2158 aaKnown RBP10.16□□□□□ -0.78
Nkx6-3-201ENSMUST00000071588 P01724 129 aa10.16□□□□□ -0.78
Nkx6-3-201ENSMUST00000071588 Higd1cQ76I25 96 aa10.16□□□□□ -0.78
Nkx6-3-201ENSMUST00000071588 Lelp1Q9DAE3 120 aa10.16□□□□□ -0.78
Nkx6-3-201ENSMUST00000071588 TshbP12656 138 aa10.15□□□□□ -0.78
Nkx6-3-201ENSMUST00000071588 Lmo4P61969 165 aa10.15□□□□□ -0.78
Nkx6-3-201ENSMUST00000071588 C1qcQ02105 246 aa10.15□□□□□ -0.78
Nkx6-3-201ENSMUST00000071588 Gm5941Q497P9 117 aa10.15□□□□□ -0.78
Nkx6-3-201ENSMUST00000071588 9230109A22RikQ8BHE6 111 aa10.15□□□□□ -0.78
Nkx6-3-201ENSMUST00000071588 Gm6793B2RXM2 351 aa10.15□□□□□ -0.78
Nkx6-3-201ENSMUST00000071588 CenpwQ3URR0 86 aa10.15□□□□□ -0.78
Nkx6-3-201ENSMUST00000071588 Ighv12-3A0A075B5T1 117 aa10.14□□□□□ -0.79
Nkx6-3-201ENSMUST00000071588 CntfrO88507 372 aa10.14□□□□□ -0.79
Nkx6-3-201ENSMUST00000071588 Defa4P28311 92 aa10.14□□□□□ -0.79
Nkx6-3-201ENSMUST00000071588 Pglyrp4Q0VB07 374 aa10.14□□□□□ -0.79
Nkx6-3-201ENSMUST00000071588 Psmb11Q8BG41 302 aa10.14□□□□□ -0.79
Nkx6-3-201ENSMUST00000071588 Ndufb3Q9CQZ6 104 aa10.14□□□□□ -0.79
Nkx6-3-201ENSMUST00000071588 Zc2hc1bQ9D534 172 aa10.14□□□□□ -0.79
Nkx6-3-201ENSMUST00000071588 Ighv1-69A0A0G2JFS5 117 aa10.14□□□□□ -0.79
Nkx6-3-201ENSMUST00000071588 Gm37988J3QM41 62 aa10.14□□□□□ -0.79
Nkx6-3-201ENSMUST00000071588 AW146154Q3TPQ7 468 aa10.14□□□□□ -0.79
Nkx6-3-201ENSMUST00000071588 FshbQ60687 130 aa10.14□□□□□ -0.79
Nkx6-3-201ENSMUST00000071588 Mrpl36Q99N90 102 aa10.14□□□□□ -0.79
Nkx6-3-201ENSMUST00000071588 RhohQ9D3G9 191 aa10.14□□□□□ -0.79
Nkx6-3-201ENSMUST00000071588 Eif4ebp1Q60876 117 aa10.13□□□□□ -0.79
Nkx6-3-201ENSMUST00000071588 Cd164l2Q9D6W7 172 aa10.13□□□□□ -0.79
Nkx6-3-201ENSMUST00000071588 Rpl36-ps4A0A140T8U4 117 aa10.13□□□□□ -0.79
Nkx6-3-201ENSMUST00000071588 Gm9936Q8C864 160 aa10.13□□□□□ -0.79
Nkx6-3-201ENSMUST00000071588 Znf414Q9DCK4 299 aa10.13□□□□□ -0.79
Nkx6-3-201ENSMUST00000071588 Hivep2Q3UHF7 2430 aa10.12□□□□□ -0.79
Nkx6-3-201ENSMUST00000071588 Amn1B8JKV0 258 aa10.12□□□□□ -0.79
Nkx6-3-201ENSMUST00000071588 Gm2564F6Z9S8 108 aa10.12□□□□□ -0.79
Retrieved 100 of 22,080 RNA–protein pairs in 53 ms