RNA–Protein interactions for RNA: ENSMUST00000042717.12

Trim39-201, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,085 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-201ENSMUST00000042717 Gm28038F7BCN9 126 aa6.38□□□□□ -1.39
Trim39-201ENSMUST00000042717 Gm94Q3V2D2 93 aa6.38□□□□□ -1.39
Trim39-201ENSMUST00000042717 Wfdc17Q5SSJ1 76 aa6.38□□□□□ -1.39
Trim39-201ENSMUST00000042717 Igsf10Q3V1M1 2594 aa6.37□□□□□ -1.39
Trim39-201ENSMUST00000042717 Gm13030A2APQ6 143 aa6.37□□□□□ -1.39
Trim39-201ENSMUST00000042717 1810011H11RikE9PVZ2 95 aa6.37□□□□□ -1.39
Trim39-201ENSMUST00000042717 Gm7137J3QMW1 236 aa6.37□□□□□ -1.39
Trim39-201ENSMUST00000042717 Mrps12O35680 139 aa6.37□□□□□ -1.39
Trim39-201ENSMUST00000042717 P01756 117 aa6.37□□□□□ -1.39
Trim39-201ENSMUST00000042717 P01757 117 aa6.37□□□□□ -1.39
Trim39-201ENSMUST00000042717 Lypd5Q9D7Z7 256 aa6.37□□□□□ -1.39
Trim39-201ENSMUST00000042717 Sertad4A7DTG3 377 aa6.37□□□□□ -1.39
Trim39-201ENSMUST00000042717 Cdx4Q07424 282 aa6.37□□□□□ -1.39
Trim39-201ENSMUST00000042717 AI854703Q8BIN3 203 aa6.37□□□□□ -1.39
Trim39-201ENSMUST00000042717 GalmQ8K157 342 aa6.37□□□□□ -1.39
Trim39-201ENSMUST00000042717 CrygfQ9CXV3 174 aa6.37□□□□□ -1.39
Trim39-201ENSMUST00000042717 Timm10bQ9WV96 100 aa6.37□□□□□ -1.39
Trim39-201ENSMUST00000042717 Gm20379A0A087WR34 119 aa6.36□□□□□ -1.39
Trim39-201ENSMUST00000042717 Trav9n-2A0A0G2JDP3 113 aa6.36□□□□□ -1.39
Trim39-201ENSMUST00000042717 Gm815Q3UWS2 115 aa6.36□□□□□ -1.39
Trim39-201ENSMUST00000042717 Ociad2Q9D8W7 154 aa6.36□□□□□ -1.39
Trim39-201ENSMUST00000042717 Cacng7P62956 275 aa6.36□□□□□ -1.39
Trim39-201ENSMUST00000042717 Tmem241Q3UME2 297 aa6.36□□□□□ -1.39
Trim39-201ENSMUST00000042717 Lyrm9Q3UN90 78 aa6.36□□□□□ -1.39
Trim39-201ENSMUST00000042717 PdpnQ62011 172 aa6.36□□□□□ -1.39
Trim39-201ENSMUST00000042717 Tnfsf18Q7TS55 173 aa6.36□□□□□ -1.39
Trim39-201ENSMUST00000042717 Rnf185Q91YT2 192 aa6.36□□□□□ -1.39
Trim39-201ENSMUST00000042717 Ighv1-63A0A075B5X2 117 aa6.36□□□□□ -1.39
Trim39-201ENSMUST00000042717 Gm7489Q3UT34 171 aa6.36□□□□□ -1.39
Trim39-201ENSMUST00000042717 Leprotl1Q9CQ74 131 aa6.36□□□□□ -1.39
Trim39-201ENSMUST00000042717 Olfr1367Q8VFG2 316 aa6.35□□□□□ -1.39
Trim39-201ENSMUST00000042717 Tnfrsf23Q9ER63 176 aa6.35□□□□□ -1.39
Trim39-201ENSMUST00000042717 Gm26938S4R185 226 aa6.35□□□□□ -1.39
Trim39-201ENSMUST00000042717 Trbv13-1A0A0B4J1P8 112 aa6.34□□□□□ -1.39
Trim39-201ENSMUST00000042717 P01738 130 aa6.34□□□□□ -1.39
Trim39-201ENSMUST00000042717 Gm9922Q8C3P1 144 aa6.34□□□□□ -1.39
Trim39-201ENSMUST00000042717 Ifi27l2aQ8R412 90 aa6.34□□□□□ -1.39
Trim39-201ENSMUST00000042717 Plpp2Q9DAX2 276 aa6.34□□□□□ -1.39
Trim39-201ENSMUST00000042717 Smlr1J3QMJ4 66 aa6.34□□□□□ -1.39
Trim39-201ENSMUST00000042717 Defb42Q8BVB5 75 aa6.34□□□□□ -1.39
Trim39-201ENSMUST00000042717 Q9D8Q6 235 aa6.34□□□□□ -1.39
Trim39-201ENSMUST00000042717 ApcQ61315 2845 aa6.34□□□□□ -1.4
Trim39-201ENSMUST00000042717 Gm10490F6VBM2 120 aa6.34□□□□□ -1.4
Trim39-201ENSMUST00000042717 Gpx7Q99LJ6 186 aa6.34□□□□□ -1.4
Trim39-201ENSMUST00000042717 Olfr313Q5NC55 308 aa6.33□□□□□ -1.4
Trim39-201ENSMUST00000042717 Htr1dQ61224 374 aa6.33□□□□□ -1.4
Trim39-201ENSMUST00000042717 Olfr1262Q8VGN2 304 aa6.33□□□□□ -1.4
Trim39-201ENSMUST00000042717 PtprqP0C5E4 2300 aa6.33□□□□□ -1.4
Trim39-201ENSMUST00000042717 Olfr869E9PX82 323 aa6.33□□□□□ -1.4
Trim39-201ENSMUST00000042717 Gm10271F6WY25 52 aa6.33□□□□□ -1.4
Trim39-201ENSMUST00000042717 9130213A22RikQ3V3T2 120 aa6.33□□□□□ -1.4
Trim39-201ENSMUST00000042717 Pla2g2eQ9QUL3 142 aa6.33□□□□□ -1.4
Trim39-201ENSMUST00000042717 Trdv5A0A075B661 115 aa6.32□□□□□ -1.4
Trim39-201ENSMUST00000042717 Dand5Q76LW6 185 aa6.32□□□□□ -1.4
Trim39-201ENSMUST00000042717 Map1lc3aQ91VR7 121 aa6.32□□□□□ -1.4
Trim39-201ENSMUST00000042717 Tmem14cQ9CQN6 114 aa6.32□□□□□ -1.4
Trim39-201ENSMUST00000042717 Ssbp1Q9CYR0 152 aaKnown RBP6.32□□□□□ -1.4
Trim39-201ENSMUST00000042717 Gm17732E9Q5I2 61 aa6.32□□□□□ -1.4
Trim39-201ENSMUST00000042717 Csn3P06796 181 aa6.32□□□□□ -1.4
Trim39-201ENSMUST00000042717 Egr2P08152 470 aa6.32□□□□□ -1.4
Trim39-201ENSMUST00000042717 Bsph1Q3UW26 133 aa6.32□□□□□ -1.4
Trim39-201ENSMUST00000042717 Cd33Q63994 403 aa6.32□□□□□ -1.4
Trim39-201ENSMUST00000042717 Gm16223Q8CBM3 117 aa6.32□□□□□ -1.4
Trim39-201ENSMUST00000042717 Olfr498Q8VEW2 330 aa6.32□□□□□ -1.4
Trim39-201ENSMUST00000042717 PmvkQ9D1G2 192 aa6.32□□□□□ -1.4
Trim39-201ENSMUST00000042717 Ndufs7Q9DC70 224 aa6.32□□□□□ -1.4
Trim39-201ENSMUST00000042717 Gm7257D3YX25 99 aa6.31□□□□□ -1.4
Trim39-201ENSMUST00000042717 B230217C12RikE9Q3Z1 139 aa6.31□□□□□ -1.4
Trim39-201ENSMUST00000042717 Gm20604F8WIA3 75 aa6.31□□□□□ -1.4
Trim39-201ENSMUST00000042717 Clec4b2Q67DU8 208 aa6.31□□□□□ -1.4
Trim39-201ENSMUST00000042717 CnfnQ6PCW6 111 aa6.31□□□□□ -1.4
Trim39-201ENSMUST00000042717 Nop10Q9CQS2 64 aa6.31□□□□□ -1.4
Trim39-201ENSMUST00000042717 Tmem263Q9DAM7 115 aa6.31□□□□□ -1.4
Trim39-201ENSMUST00000042717 Trav14n-2A0A0G2JDF5 121 aa6.31□□□□□ -1.4
Trim39-201ENSMUST00000042717 Gm20499D3Z4G5 72 aa6.31□□□□□ -1.4
Trim39-201ENSMUST00000042717 CrygdP04342 174 aa6.31□□□□□ -1.4
Trim39-201ENSMUST00000042717 Gata3P23772 443 aa6.31□□□□□ -1.4
Trim39-201ENSMUST00000042717 CrygeQ03740 174 aa6.31□□□□□ -1.4
Trim39-201ENSMUST00000042717 Pxt1Q8K459 51 aa6.31□□□□□ -1.4
Trim39-201ENSMUST00000042717 Iah1Q9DB29 249 aa6.31□□□□□ -1.4
Trim39-201ENSMUST00000042717 Fam240bJ3QMB3 78 aa6.31□□□□□ -1.4
Trim39-201ENSMUST00000042717 Mllt11P97783 90 aa6.31□□□□□ -1.4
Trim39-201ENSMUST00000042717 Igkv4-68A0A0B4J1I7 117 aa6.3□□□□□ -1.4
Trim39-201ENSMUST00000042717 Lcn2P11672 200 aa6.3□□□□□ -1.4
Trim39-201ENSMUST00000042717 1500011B03RikQ3TTH7 73 aa6.3□□□□□ -1.4
Trim39-201ENSMUST00000042717 Trav16d-dv11A0A075B617 117 aa6.3□□□□□ -1.4
Trim39-201ENSMUST00000042717 Tspan13Q9D8C2 204 aa6.3□□□□□ -1.4
Trim39-201ENSMUST00000042717 Gm15294V9GXA7 121 aa6.3□□□□□ -1.4
Trim39-201ENSMUST00000042717 Nat8f4G5E8L3 226 aa6.29□□□□□ -1.4
Trim39-201ENSMUST00000042717 P06334 169 aa6.29□□□□□ -1.4
Trim39-201ENSMUST00000042717 Gtf2h5Q8K2X8 71 aa6.29□□□□□ -1.4
Trim39-201ENSMUST00000042717 TctaQ8VEA7 122 aa6.29□□□□□ -1.4
Trim39-201ENSMUST00000042717 Psmb2Q9R1P3 201 aa6.29□□□□□ -1.4
Trim39-201ENSMUST00000042717 Igll1P20764 209 aa6.29□□□□□ -1.4
Trim39-201ENSMUST00000042717 TbpP29037 316 aa6.29□□□□□ -1.4
Trim39-201ENSMUST00000042717 Sdhaf1Q3U276 118 aa6.29□□□□□ -1.4
Trim39-201ENSMUST00000042717 Olfr975Q8VG91 310 aa6.29□□□□□ -1.4
Trim39-201ENSMUST00000042717 Leap2Q91V13 76 aa6.29□□□□□ -1.4
Trim39-201ENSMUST00000042717 Q99M08 65 aa6.29□□□□□ -1.4
Trim39-201ENSMUST00000042717 Gm28044L7N1X0 119 aa6.29□□□□□ -1.4
Retrieved 100 of 22,080 RNA–protein pairs in 60.2 ms