Protein–RNA interactions for Protein: P11672

Lcn2, Neutrophil gelatinase-associated lipocalin, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lcn2P11672 Gm25239-201ENSMUST00000174915 86 ntBASIC25.89■■□□□ 1.74
Lcn2P11672 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
Lcn2P11672 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
Lcn2P11672 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Lcn2P11672 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC24.15■■□□□ 1.46
Lcn2P11672 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
Lcn2P11672 Psd-208ENSMUST00000224556 2034 ntBASIC23.88■■□□□ 1.41
Lcn2P11672 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Lcn2P11672 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Lcn2P11672 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Lcn2P11672 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC22.82■■□□□ 1.24
Lcn2P11672 Gm15042-201ENSMUST00000120212 883 ntBASIC22.76■■□□□ 1.23
Lcn2P11672 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Lcn2P11672 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Lcn2P11672 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC22.63■■□□□ 1.21
Lcn2P11672 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
Lcn2P11672 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Lcn2P11672 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Lcn2P11672 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Lcn2P11672 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Lcn2P11672 Gm24109-201ENSMUST00000175489 103 ntBASIC22.37■■□□□ 1.17
Lcn2P11672 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Lcn2P11672 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Lcn2P11672 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC22.27■■□□□ 1.16
Lcn2P11672 Gm15045-201ENSMUST00000117359 883 ntBASIC22.2■■□□□ 1.14
Lcn2P11672 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC22.11■■□□□ 1.13
Lcn2P11672 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Lcn2P11672 Gm42596-201ENSMUST00000196305 1958 ntBASIC22.05■■□□□ 1.12
Lcn2P11672 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Lcn2P11672 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Lcn2P11672 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC21.84■■□□□ 1.09
Lcn2P11672 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
Lcn2P11672 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Lcn2P11672 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Lcn2P11672 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC21.69■■□□□ 1.06
Lcn2P11672 Gm23366-201ENSMUST00000175022 89 ntBASIC21.68■■□□□ 1.06
Lcn2P11672 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Lcn2P11672 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Lcn2P11672 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Lcn2P11672 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC21.52■■□□□ 1.04
Lcn2P11672 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
Lcn2P11672 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC21.45■■□□□ 1.02
Lcn2P11672 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Lcn2P11672 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
Lcn2P11672 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Lcn2P11672 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC21.28■■□□□ 1
Lcn2P11672 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC21.24■□□□□ 0.99
Lcn2P11672 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Lcn2P11672 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Lcn2P11672 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Lcn2P11672 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
Lcn2P11672 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Lcn2P11672 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Lcn2P11672 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Lcn2P11672 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Lcn2P11672 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Lcn2P11672 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
Lcn2P11672 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
Lcn2P11672 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Lcn2P11672 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Lcn2P11672 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Lcn2P11672 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Lcn2P11672 Gm10524-201ENSMUST00000181931 1893 ntBASIC20.94■□□□□ 0.94
Lcn2P11672 AC153911.1-202ENSMUST00000218534 1034 ntBASIC20.91■□□□□ 0.94
Lcn2P11672 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Lcn2P11672 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
Lcn2P11672 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC20.86■□□□□ 0.93
Lcn2P11672 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC20.86■□□□□ 0.93
Lcn2P11672 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Lcn2P11672 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Lcn2P11672 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Lcn2P11672 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Lcn2P11672 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Lcn2P11672 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC20.77■□□□□ 0.92
Lcn2P11672 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Lcn2P11672 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC20.73■□□□□ 0.91
Lcn2P11672 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC20.71■□□□□ 0.91
Lcn2P11672 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Lcn2P11672 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Lcn2P11672 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Lcn2P11672 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC20.64■□□□□ 0.89
Lcn2P11672 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Lcn2P11672 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Lcn2P11672 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Lcn2P11672 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Lcn2P11672 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Lcn2P11672 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Lcn2P11672 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Lcn2P11672 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Lcn2P11672 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Lcn2P11672 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Lcn2P11672 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC20.43■□□□□ 0.86
Lcn2P11672 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC20.43■□□□□ 0.86
Lcn2P11672 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
Lcn2P11672 Zxda-201ENSMUST00000117281 2621 ntBASIC20.39■□□□□ 0.85
Lcn2P11672 Gm25238-201ENSMUST00000174914 89 ntBASIC20.37■□□□□ 0.85
Lcn2P11672 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC20.3■□□□□ 0.84
Lcn2P11672 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Lcn2P11672 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Lcn2P11672 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms