RNA–Protein interactions for RNA: ENSMUST00000040182.12

Ccdc88a-201, Transcript of Girdin, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Ccdc88a, Length 9,376 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-201ENSMUST00000040182 Vpreb2P13373 142 aa13.06□□□□□ -0.32
Ccdc88a-201ENSMUST00000040182 Pla2g5P97391 137 aa13.06□□□□□ -0.32
Ccdc88a-201ENSMUST00000040182 Brk1Q91VR8 75 aa13.06□□□□□ -0.32
Ccdc88a-201ENSMUST00000040182 P04940 107 aa13.05□□□□□ -0.32
Ccdc88a-201ENSMUST00000040182 P04941 107 aa13.05□□□□□ -0.32
Ccdc88a-201ENSMUST00000040182 Gm5941Q497P9 117 aa13.05□□□□□ -0.32
Ccdc88a-201ENSMUST00000040182 Gm12253Q5NC48 229 aa13.05□□□□□ -0.32
Ccdc88a-201ENSMUST00000040182 Fam222aQ6PGH4 453 aa13.05□□□□□ -0.32
Ccdc88a-201ENSMUST00000040182 Gm11733Q8BQP1 125 aa13.05□□□□□ -0.32
Ccdc88a-201ENSMUST00000040182 P01789 122 aa13.05□□□□□ -0.32
Ccdc88a-201ENSMUST00000040182 Fstl3Q9EQC7 256 aa13.05□□□□□ -0.32
Ccdc88a-201ENSMUST00000040182 4930415O20RikQ8CDT5 131 aa13.04□□□□□ -0.32
Ccdc88a-201ENSMUST00000040182 Ighv8-8A0A0A6YXQ0 119 aa13.04□□□□□ -0.32
Ccdc88a-201ENSMUST00000040182 Igkv8-18A0A0B4J1J3 123 aa13.04□□□□□ -0.32
Ccdc88a-201ENSMUST00000040182 Eif4ebp1Q60876 117 aa13.04□□□□□ -0.32
Ccdc88a-201ENSMUST00000040182 Defb29Q8BGW9 78 aa13.04□□□□□ -0.32
Ccdc88a-201ENSMUST00000040182 Igkv2-137A0A0B4J1H6 120 aa13.04□□□□□ -0.32
Ccdc88a-201ENSMUST00000040182 Trav11A0A0B4J1J9 114 aa13.03□□□□□ -0.32
Ccdc88a-201ENSMUST00000040182 Clec4b2Q67DU8 208 aa13.03□□□□□ -0.32
Ccdc88a-201ENSMUST00000040182 Gm15093A2BI72 449 aa13.03□□□□□ -0.32
Ccdc88a-201ENSMUST00000040182 Gm15097E9QA14 449 aa13.03□□□□□ -0.32
Ccdc88a-201ENSMUST00000040182 P04945 108 aa13.03□□□□□ -0.32
Ccdc88a-201ENSMUST00000040182 Nop10Q9CQS2 64 aa13.02□□□□□ -0.32
Ccdc88a-201ENSMUST00000040182 Ndufc1Q9CQY9 76 aa13.02□□□□□ -0.32
Ccdc88a-201ENSMUST00000040182 Tm2d2Q8R0I4 213 aa13.02□□□□□ -0.32
Ccdc88a-201ENSMUST00000040182 Gm19684G3UZ45 117 aa13.02□□□□□ -0.33
Ccdc88a-201ENSMUST00000040182 Rspo1Q9Z132 265 aa13.02□□□□□ -0.33
Ccdc88a-201ENSMUST00000040182 Wisp3D3Z5L9 354 aa13.02□□□□□ -0.33
Ccdc88a-201ENSMUST00000040182 Vsig4F6TUL9 280 aa13.02□□□□□ -0.33
Ccdc88a-201ENSMUST00000040182 3110082J24RikF6Z6Z2 108 aa13.02□□□□□ -0.33
Ccdc88a-201ENSMUST00000040182 Ighv1-77A0A0G2JGS9 117 aa13.01□□□□□ -0.33
Ccdc88a-201ENSMUST00000040182 1500011B03RikQ3TTH7 73 aa13.01□□□□□ -0.33
Ccdc88a-201ENSMUST00000040182 Bub3Q9WVA3 326 aa13.01□□□□□ -0.33
Ccdc88a-201ENSMUST00000040182 9930022D16RikQ8BG27 128 aa13.01□□□□□ -0.33
Ccdc88a-201ENSMUST00000040182 P01793 123 aa13.01□□□□□ -0.33
Ccdc88a-201ENSMUST00000040182 Gm15085Q62012 449 aa13.01□□□□□ -0.33
Ccdc88a-201ENSMUST00000040182 Dazap2Q9DCP9 168 aa13.01□□□□□ -0.33
Ccdc88a-201ENSMUST00000040182 Gm6040Q4QY32 63 aa13□□□□□ -0.33
Ccdc88a-201ENSMUST00000040182 Hivep2Q3UHF7 2430 aa13□□□□□ -0.33
Ccdc88a-201ENSMUST00000040182 Igkv1-122A0A140T8M9 119 aa13□□□□□ -0.33
Ccdc88a-201ENSMUST00000040182 Gm5129F6YHA9 99 aa13□□□□□ -0.33
Ccdc88a-201ENSMUST00000040182 Gm9961Q8BNV2 113 aa13□□□□□ -0.33
Ccdc88a-201ENSMUST00000040182 Ighv1-52A0A0A6YXC3 117 aa13□□□□□ -0.33
Ccdc88a-201ENSMUST00000040182 Ccl24Q9JKC0 119 aa13□□□□□ -0.33
Ccdc88a-201ENSMUST00000040182 Tmem254aP0DN89 123 aa12.99□□□□□ -0.33
Ccdc88a-201ENSMUST00000040182 Tmem254bP0DN90 123 aa12.99□□□□□ -0.33
Ccdc88a-201ENSMUST00000040182 Tmem254cP0DN91 123 aa12.99□□□□□ -0.33
Ccdc88a-201ENSMUST00000040182 Ighv6-7A0A0A6YWU3 119 aa12.99□□□□□ -0.33
Ccdc88a-201ENSMUST00000040182 B9d2Q3UK10 175 aa12.99□□□□□ -0.33
Ccdc88a-201ENSMUST00000040182 Trbv16A0A0B4J1H3 115 aa12.99□□□□□ -0.33
Ccdc88a-201ENSMUST00000040182 P01794 123 aa12.99□□□□□ -0.33
Ccdc88a-201ENSMUST00000040182 Trav12d-3A0A075B6A4 115 aa12.99□□□□□ -0.33
Ccdc88a-201ENSMUST00000040182 Sec61gP60060 68 aa12.99□□□□□ -0.33
Ccdc88a-201ENSMUST00000040182 Fgf6P21658 208 aa12.99□□□□□ -0.33
Ccdc88a-201ENSMUST00000040182 Zc2hc1aQ8BJH1 324 aa12.99□□□□□ -0.33
Ccdc88a-201ENSMUST00000040182 Spink10Q8CAC8 162 aa12.99□□□□□ -0.33
Ccdc88a-201ENSMUST00000040182 Trbv14A0A140T8L9 115 aa12.98□□□□□ -0.33
Ccdc88a-201ENSMUST00000040182 Tnfrsf13bQ9ET35 249 aa12.98□□□□□ -0.33
Ccdc88a-201ENSMUST00000040182 Q08AU9 97 aa12.98□□□□□ -0.33
Ccdc88a-201ENSMUST00000040182 Zmat4Q8BZ94 229 aa12.98□□□□□ -0.33
Ccdc88a-201ENSMUST00000040182 P04942 107 aa12.97□□□□□ -0.33
Ccdc88a-201ENSMUST00000040182 Defb47Q30KN1 79 aa12.97□□□□□ -0.33
Ccdc88a-201ENSMUST00000040182 1700010B08RikQ9DAI7 102 aa12.97□□□□□ -0.33
Ccdc88a-201ENSMUST00000040182 Gp9O88186 177 aa12.97□□□□□ -0.33
Ccdc88a-201ENSMUST00000040182 Odf1Q61999 247 aa12.97□□□□□ -0.33
Ccdc88a-201ENSMUST00000040182 Tmem223Q9CQE2 199 aaKnown RBP12.97□□□□□ -0.33
Ccdc88a-201ENSMUST00000040182 Foxc1Q61572 553 aa12.97□□□□□ -0.33
Ccdc88a-201ENSMUST00000040182 Ormdl1Q921I0 153 aa12.97□□□□□ -0.33
Ccdc88a-201ENSMUST00000040182 Gm20730A0A075B5J6 119 aa12.97□□□□□ -0.33
Ccdc88a-201ENSMUST00000040182 SvipQ3UZP4 77 aa12.97□□□□□ -0.33
Ccdc88a-201ENSMUST00000040182 Gm9513B3GLJ6 99 aa12.97□□□□□ -0.33
Ccdc88a-201ENSMUST00000040182 Mrps12O35680 139 aa12.96□□□□□ -0.33
Ccdc88a-201ENSMUST00000040182 Tax1bp3Q9DBG9 124 aa12.96□□□□□ -0.33
Ccdc88a-201ENSMUST00000040182 PrcdQ00LT2 53 aa12.96□□□□□ -0.33
Ccdc88a-201ENSMUST00000040182 Gm37389A0A0A6YW05 95 aa12.96□□□□□ -0.33
Ccdc88a-201ENSMUST00000040182 P01791 123 aa12.96□□□□□ -0.33
Ccdc88a-201ENSMUST00000040182 Ramp1Q9WTJ5 148 aa12.96□□□□□ -0.34
Ccdc88a-201ENSMUST00000040182 UrahQ9CRB3 118 aa12.95□□□□□ -0.34
Ccdc88a-201ENSMUST00000040182 AngP21570 145 aa12.95□□□□□ -0.34
Ccdc88a-201ENSMUST00000040182 Ucn2Q99ML8 113 aa12.95□□□□□ -0.34
Ccdc88a-201ENSMUST00000040182 Setd2E9Q5F9 2537 aa12.94□□□□□ -0.34
Ccdc88a-201ENSMUST00000040182 P01745 121 aa12.94□□□□□ -0.34
Ccdc88a-201ENSMUST00000040182 Luzp4B1AV09 449 aa12.93□□□□□ -0.34
Ccdc88a-201ENSMUST00000040182 Gm15127B1AVZ5 449 aa12.93□□□□□ -0.34
Ccdc88a-201ENSMUST00000040182 Gm15107B1B0X0 449 aa12.93□□□□□ -0.34
Ccdc88a-201ENSMUST00000040182 Foxi2Q3I5G5 311 aa12.92□□□□□ -0.34
Ccdc88a-201ENSMUST00000040182 Rnf144bQ8BKD6 301 aa12.92□□□□□ -0.34
Ccdc88a-201ENSMUST00000040182 Prok1Q14A28 105 aa12.92□□□□□ -0.34
Ccdc88a-201ENSMUST00000040182 Igkv3-5A0A140T8M6 119 aa12.92□□□□□ -0.34
Ccdc88a-201ENSMUST00000040182 Ccdc179J3QM76 67 aa12.92□□□□□ -0.34
Ccdc88a-201ENSMUST00000040182 Wfdc9Q3UW41 83 aa12.92□□□□□ -0.34
Ccdc88a-201ENSMUST00000040182 Fam110dQ80X91 271 aa12.92□□□□□ -0.34
Ccdc88a-201ENSMUST00000040182 Ighv1-12A0A0A6YXJ9 117 aa12.92□□□□□ -0.34
Ccdc88a-201ENSMUST00000040182 Gm10518F6UQQ9 182 aa12.92□□□□□ -0.34
Ccdc88a-201ENSMUST00000040182 3110021N24RikJ3QMN2 152 aa12.91□□□□□ -0.34
Ccdc88a-201ENSMUST00000040182 7420426K07RikQ3UX66 186 aa12.91□□□□□ -0.34
Ccdc88a-201ENSMUST00000040182 Fxyd5P97808 178 aa12.91□□□□□ -0.34
Ccdc88a-201ENSMUST00000040182 Gm10735Q3US96 136 aa12.91□□□□□ -0.34
Ccdc88a-201ENSMUST00000040182 Naa38Q9D2U5 125 aa12.91□□□□□ -0.34
Ccdc88a-201ENSMUST00000040182 Cryba4Q9JJV0 196 aa12.91□□□□□ -0.34
Retrieved 100 of 22,080 RNA–protein pairs in 40.9 ms