RNA–Protein interactions for RNA: ENSMUST00000039443.13

Ccdc50-201, Transcript of Coiled-coil domain-containing protein 50, mousemouse

TSL 1 (best) BASIC

Gene Ccdc50, Length 2,192 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc50-201ENSMUST00000039443 Krtap26-1Q9D7N2 215 aa14.29□□□□□ -0.12
Ccdc50-201ENSMUST00000039443 Rs1Q9Z1L4 224 aa14.29□□□□□ -0.12
Ccdc50-201ENSMUST00000039443 Ighv1-50A0A075B5W1 117 aa14.29□□□□□ -0.12
Ccdc50-201ENSMUST00000039443 Trbv16A0A0B4J1H3 115 aa14.29□□□□□ -0.12
Ccdc50-201ENSMUST00000039443 Nat8b-psE0CYC6 232 aa14.29□□□□□ -0.12
Ccdc50-201ENSMUST00000039443 Insl3O09107 122 aa14.29□□□□□ -0.12
Ccdc50-201ENSMUST00000039443 Lyzl4Q9D925 145 aa14.29□□□□□ -0.12
Ccdc50-201ENSMUST00000039443 Mast4Q811L6 2618 aa14.28□□□□□ -0.12
Ccdc50-201ENSMUST00000039443 Trav6-4A0A075B6B4 115 aa14.28□□□□□ -0.12
Ccdc50-201ENSMUST00000039443 Gm20499D3Z4G5 72 aa14.28□□□□□ -0.12
Ccdc50-201ENSMUST00000039443 P01747 120 aa14.28□□□□□ -0.12
Ccdc50-201ENSMUST00000039443 Uqcrfs1Q9CR68 274 aa14.28□□□□□ -0.12
Ccdc50-201ENSMUST00000039443 PmvkQ9D1G2 192 aa14.28□□□□□ -0.12
Ccdc50-201ENSMUST00000039443 Timm17aQ9Z0V8 171 aa14.28□□□□□ -0.12
Ccdc50-201ENSMUST00000039443 Gm42674D3YUT9 64 aa14.27□□□□□ -0.12
Ccdc50-201ENSMUST00000039443 Foxi2Q3I5G5 311 aa14.27□□□□□ -0.12
Ccdc50-201ENSMUST00000039443 Usmg5Q78IK2 58 aa14.27□□□□□ -0.12
Ccdc50-201ENSMUST00000039443 Prrc2cQ3TLH4 2846 aaKnown RBP14.27□□□□□ -0.12
Ccdc50-201ENSMUST00000039443 Nbeal1E9PYP2 2688 aa14.27□□□□□ -0.12
Ccdc50-201ENSMUST00000039443 Myo9aQ8C170 2542 aa14.27□□□□□ -0.12
Ccdc50-201ENSMUST00000039443 Gm21370Q3T9V6 190 aa14.27□□□□□ -0.13
Ccdc50-201ENSMUST00000039443 SrarpQ3ULG3 163 aa14.27□□□□□ -0.13
Ccdc50-201ENSMUST00000039443 Sh3bgrl2Q8BG73 107 aa14.26□□□□□ -0.13
Ccdc50-201ENSMUST00000039443 Sdk1Q3UH53 2193 aa14.26□□□□□ -0.13
Ccdc50-201ENSMUST00000039443 Gm17732E9Q5I2 61 aa14.26□□□□□ -0.13
Ccdc50-201ENSMUST00000039443 4930596D02RikQ3V0H9 216 aa14.26□□□□□ -0.13
Ccdc50-201ENSMUST00000039443 Ndufb4Q9CQC7 129 aa14.26□□□□□ -0.13
Ccdc50-201ENSMUST00000039443 Arhgap32Q811P8 2089 aa14.25□□□□□ -0.13
Ccdc50-201ENSMUST00000039443 Gm28269A0A087WSG3 125 aa14.25□□□□□ -0.13
Ccdc50-201ENSMUST00000039443 Ighv1-5A0A0A6YWG2 117 aa14.25□□□□□ -0.13
Ccdc50-201ENSMUST00000039443 Gphb5Q812B2 130 aa14.25□□□□□ -0.13
Ccdc50-201ENSMUST00000039443 Prss41Q920S2 322 aa14.25□□□□□ -0.13
Ccdc50-201ENSMUST00000039443 Spink12Q9D256 87 aa14.25□□□□□ -0.13
Ccdc50-201ENSMUST00000039443 Gm45785A0A1B0GT05 94 aa14.24□□□□□ -0.13
Ccdc50-201ENSMUST00000039443 Ash1lQ99MY8 2958 aa14.24□□□□□ -0.13
Ccdc50-201ENSMUST00000039443 Igkv2-137A0A0B4J1H6 120 aa14.24□□□□□ -0.13
Ccdc50-201ENSMUST00000039443 LhbO09108 141 aa14.24□□□□□ -0.13
Ccdc50-201ENSMUST00000039443 Cela2aP05208 271 aa14.24□□□□□ -0.13
Ccdc50-201ENSMUST00000039443 Triap1Q9D8Z2 76 aa14.24□□□□□ -0.13
Ccdc50-201ENSMUST00000039443 Sptan1P16546 2472 aaKnown RBP14.24□□□□□ -0.13
Ccdc50-201ENSMUST00000039443 Rpl39P62892 51 aa14.23□□□□□ -0.13
Ccdc50-201ENSMUST00000039443 Cryba4Q9JJV0 196 aa14.23□□□□□ -0.13
Ccdc50-201ENSMUST00000039443 Abca12E9Q876 2595 aa14.23□□□□□ -0.13
Ccdc50-201ENSMUST00000039443 Ighv3-8A0A075B5T0 131 aa14.23□□□□□ -0.13
Ccdc50-201ENSMUST00000039443 Tep1P97499 2629 aa14.23□□□□□ -0.13
Ccdc50-201ENSMUST00000039443 Muc2Q80Z19 2680 aa14.22□□□□□ -0.13
Ccdc50-201ENSMUST00000039443 MrapQ9D159 127 aa14.22□□□□□ -0.13
Ccdc50-201ENSMUST00000039443 HilpdaQ9JLS0 64 aa14.22□□□□□ -0.13
Ccdc50-201ENSMUST00000039443 Clec5aQ9R007 190 aa14.22□□□□□ -0.13
Ccdc50-201ENSMUST00000039443 Ighv1-63A0A075B5X2 117 aa14.22□□□□□ -0.13
Ccdc50-201ENSMUST00000039443 Sprr3O09116 238 aa14.22□□□□□ -0.13
Ccdc50-201ENSMUST00000039443 Adgrg4B7ZCC9 3073 aa14.21□□□□□ -0.13
Ccdc50-201ENSMUST00000039443 Gm2564F6Z9S8 108 aa14.21□□□□□ -0.13
Ccdc50-201ENSMUST00000039443 Ccl19O70460 108 aa14.21□□□□□ -0.13
Ccdc50-201ENSMUST00000039443 Bri3P28662 125 aa14.21□□□□□ -0.13
Ccdc50-201ENSMUST00000039443 Runx1Q03347 451 aa14.21□□□□□ -0.13
Ccdc50-201ENSMUST00000039443 Il1f10Q8R459 152 aa14.21□□□□□ -0.13
Ccdc50-201ENSMUST00000039443 OtoglF7A4A7 2325 aa14.21□□□□□ -0.14
Ccdc50-201ENSMUST00000039443 Ighv1-85A0A075B5Y6 117 aa14.2□□□□□ -0.14
Ccdc50-201ENSMUST00000039443 Trbv13-1A0A0B4J1P8 112 aa14.2□□□□□ -0.14
Ccdc50-201ENSMUST00000039443 Pglyrp1O88593 182 aa14.2□□□□□ -0.14
Ccdc50-201ENSMUST00000039443 F11rO88792 300 aa14.2□□□□□ -0.14
Ccdc50-201ENSMUST00000039443 Cfc1P97766 202 aa14.2□□□□□ -0.14
Ccdc50-201ENSMUST00000039443 Atp5lQ9CPQ8 103 aa14.2□□□□□ -0.14
Ccdc50-201ENSMUST00000039443 Klk5Q9D140 293 aa14.2□□□□□ -0.14
Ccdc50-201ENSMUST00000039443 Tnfrsf23Q9ER63 176 aa14.2□□□□□ -0.14
Ccdc50-201ENSMUST00000039443 Higd1aQ9JLR9 95 aa14.2□□□□□ -0.14
Ccdc50-201ENSMUST00000039443 Igkv4-62A0A0G2JDW9 117 aa14.2□□□□□ -0.14
Ccdc50-201ENSMUST00000039443 Tmem262D3Z338 116 aa14.2□□□□□ -0.14
Ccdc50-201ENSMUST00000039443 Rpl13aP19253 203 aaKnown RBP14.2□□□□□ -0.14
Ccdc50-201ENSMUST00000039443 Cks1bP61025 79 aa14.2□□□□□ -0.14
Ccdc50-201ENSMUST00000039443 Cdip1Q9DB75 208 aa14.2□□□□□ -0.14
Ccdc50-201ENSMUST00000039443 Ighv14-1A0A075B5R4 117 aa14.19□□□□□ -0.14
Ccdc50-201ENSMUST00000039443 Gm933J3QPC1 141 aa14.19□□□□□ -0.14
Ccdc50-201ENSMUST00000039443 Smg1Q8BKX6 3658 aaKnown RBP14.19□□□□□ -0.14
Ccdc50-201ENSMUST00000039443 Gm6793B2RXM2 351 aa14.19□□□□□ -0.14
Ccdc50-201ENSMUST00000039443 Gm28044L7N1X0 119 aa14.19□□□□□ -0.14
Ccdc50-201ENSMUST00000039443 P01726 129 aa14.19□□□□□ -0.14
Ccdc50-201ENSMUST00000039443 LeprotO89013 131 aa14.18□□□□□ -0.14
Ccdc50-201ENSMUST00000039443 Ighv1-12A0A0A6YXJ9 117 aa14.17□□□□□ -0.14
Ccdc50-201ENSMUST00000039443 Ccl21aP84444 133 aa14.17□□□□□ -0.14
Ccdc50-201ENSMUST00000039443 Ccl21bP86792 133 aa14.17□□□□□ -0.14
Ccdc50-201ENSMUST00000039443 Ccl21cP86793 133 aa14.17□□□□□ -0.14
Ccdc50-201ENSMUST00000039443 Hivep2Q3UHF7 2430 aa14.17□□□□□ -0.14
Ccdc50-201ENSMUST00000039443 Gm10521E9PZK0 135 aa14.16□□□□□ -0.14
Ccdc50-201ENSMUST00000039443 Gm10226O88253 85 aa14.16□□□□□ -0.14
Ccdc50-201ENSMUST00000039443 CckP09240 115 aa14.16□□□□□ -0.14
Ccdc50-201ENSMUST00000039443 Ifitm1Q9D103 106 aa14.16□□□□□ -0.14
Ccdc50-201ENSMUST00000039443 Scgb1b24B1B0N6 92 aa14.16□□□□□ -0.14
Ccdc50-201ENSMUST00000039443 C1qcQ02105 246 aa14.16□□□□□ -0.14
Ccdc50-201ENSMUST00000039443 GalmQ8K157 342 aa14.16□□□□□ -0.14
Ccdc50-201ENSMUST00000039443 3110018I06RikQ9CXS0 120 aa14.16□□□□□ -0.14
Ccdc50-201ENSMUST00000039443 1700067P10RikG3X8U2 183 aa14.15□□□□□ -0.14
Ccdc50-201ENSMUST00000039443 Phlda3Q9WV95 125 aa14.15□□□□□ -0.15
Ccdc50-201ENSMUST00000039443 FcorP0DJI6 106 aa14.14□□□□□ -0.15
Ccdc50-201ENSMUST00000039443 Edn2P22389 175 aa14.14□□□□□ -0.15
Ccdc50-201ENSMUST00000039443 Snrpd3P62320 126 aaKnown RBP14.14□□□□□ -0.15
Ccdc50-201ENSMUST00000039443 TtrP07309 147 aa14.13□□□□□ -0.15
Ccdc50-201ENSMUST00000039443 Hoxd3P09027 433 aa14.13□□□□□ -0.15
Ccdc50-201ENSMUST00000039443 BlcapP62951 87 aa14.13□□□□□ -0.15
Retrieved 100 of 22,080 RNA–protein pairs in 1351.1 ms