RNA–Protein interactions for RNA: ENSMUST00000033158.5

Ubfd1-201, Transcript of Ubiquitin domain-containing protein UBFD1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubfd1, Length 4,849 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1-201ENSMUST00000033158 Sorl1O88307 2215 aaKnown RBP12.8□□□□□ -0.36
Ubfd1-201ENSMUST00000033158 Dennd4cA6H8H2 1906 aa12.8□□□□□ -0.36
Ubfd1-201ENSMUST00000033158 Zfand3Q497H0 227 aa12.8□□□□□ -0.36
Ubfd1-201ENSMUST00000033158 Obox8V9GWY9 217 aa12.8□□□□□ -0.36
Ubfd1-201ENSMUST00000033158 Igkv4-69A0A0B4J1I6 116 aa12.8□□□□□ -0.36
Ubfd1-201ENSMUST00000033158 Col5a3Q9JLI2 1739 aa12.8□□□□□ -0.36
Ubfd1-201ENSMUST00000033158 Iglv1A0A075B663 117 aa12.79□□□□□ -0.36
Ubfd1-201ENSMUST00000033158 Igkv6-13A0A0G2JGY3 119 aa12.79□□□□□ -0.36
Ubfd1-201ENSMUST00000033158 MplkipQ9D011 178 aa12.79□□□□□ -0.36
Ubfd1-201ENSMUST00000033158 Ighv2-7A0A075B5Q8 116 aa12.79□□□□□ -0.36
Ubfd1-201ENSMUST00000033158 Ighv13-2A0A0A6YWN3 119 aa12.79□□□□□ -0.36
Ubfd1-201ENSMUST00000033158 Fhl1P97447 280 aaKnown RBP12.79□□□□□ -0.36
Ubfd1-201ENSMUST00000033158 Ang4Q3TMQ6 144 aa12.79□□□□□ -0.36
Ubfd1-201ENSMUST00000033158 PtprsB0V2N1 1907 aa12.79□□□□□ -0.36
Ubfd1-201ENSMUST00000033158 P01748 117 aa12.78□□□□□ -0.36
Ubfd1-201ENSMUST00000033158 Gm9913Q8BQQ2 135 aa12.78□□□□□ -0.36
Ubfd1-201ENSMUST00000033158 Klk11Q9QYN3 276 aa12.78□□□□□ -0.36
Ubfd1-201ENSMUST00000033158 Gm21060J3KMU4 56 aa12.78□□□□□ -0.36
Ubfd1-201ENSMUST00000033158 Ndufa1O35683 70 aa12.78□□□□□ -0.36
Ubfd1-201ENSMUST00000033158 Foxi2Q3I5G5 311 aa12.78□□□□□ -0.36
Ubfd1-201ENSMUST00000033158 Gm9958Q8C9U4 106 aa12.78□□□□□ -0.36
Ubfd1-201ENSMUST00000033158 P01837 106 aa12.77□□□□□ -0.36
Ubfd1-201ENSMUST00000033158 SelenowP63300 88 aa12.77□□□□□ -0.36
Ubfd1-201ENSMUST00000033158 Egr2P08152 470 aa12.77□□□□□ -0.37
Ubfd1-201ENSMUST00000033158 Gata3P23772 443 aa12.77□□□□□ -0.37
Ubfd1-201ENSMUST00000033158 Ndufs7Q9DC70 224 aa12.77□□□□□ -0.37
Ubfd1-201ENSMUST00000033158 Vsig4F6TUL9 280 aa12.77□□□□□ -0.37
Ubfd1-201ENSMUST00000033158 OdaphJ3QNT8 126 aa12.77□□□□□ -0.37
Ubfd1-201ENSMUST00000033158 Timm17aQ9Z0V8 171 aa12.76□□□□□ -0.37
Ubfd1-201ENSMUST00000033158 Igkv4-78A0A0A6YYE5 119 aa12.76□□□□□ -0.37
Ubfd1-201ENSMUST00000033158 Rpl32P62911 135 aaKnown RBP12.76□□□□□ -0.37
Ubfd1-201ENSMUST00000033158 Cox7cP17665 63 aa12.76□□□□□ -0.37
Ubfd1-201ENSMUST00000033158 Ighv1-53A0A075B5W3 117 aa12.76□□□□□ -0.37
Ubfd1-201ENSMUST00000033158 Pglyrp1O88593 182 aa12.76□□□□□ -0.37
Ubfd1-201ENSMUST00000033158 NrgnP60761 78 aa12.76□□□□□ -0.37
Ubfd1-201ENSMUST00000033158 Pip4p1Q3TWL2 284 aa12.76□□□□□ -0.37
Ubfd1-201ENSMUST00000033158 Fam19a4Q7TPG5 135 aa12.76□□□□□ -0.37
Ubfd1-201ENSMUST00000033158 Ly6g5bQ8K1T4 194 aa12.76□□□□□ -0.37
Ubfd1-201ENSMUST00000033158 HelzQ6DFV5 1964 aaKnown RBP12.76□□□□□ -0.37
Ubfd1-201ENSMUST00000033158 Trbv16A0A0B4J1H3 115 aa12.75□□□□□ -0.37
Ubfd1-201ENSMUST00000033158 Zmat4Q8BZ94 229 aa12.75□□□□□ -0.37
Ubfd1-201ENSMUST00000033158 Ighv1-62-2A0A0A6YXZ4 119 aa12.75□□□□□ -0.37
Ubfd1-201ENSMUST00000033158 Gm20481G3UXK4 153 aa12.74□□□□□ -0.37
Ubfd1-201ENSMUST00000033158 Rpl39P62892 51 aa12.74□□□□□ -0.37
Ubfd1-201ENSMUST00000033158 Cox7a1P56392 80 aa12.74□□□□□ -0.37
Ubfd1-201ENSMUST00000033158 Gm9936Q8C864 160 aa12.74□□□□□ -0.37
Ubfd1-201ENSMUST00000033158 Ighv12-3A0A075B5T1 117 aa12.74□□□□□ -0.37
Ubfd1-201ENSMUST00000033158 Lst1O08843 95 aa12.74□□□□□ -0.37
Ubfd1-201ENSMUST00000033158 Odf3l1Q810P2 275 aa12.74□□□□□ -0.37
Ubfd1-201ENSMUST00000033158 1810032O08RikE9PZV8 113 aa12.74□□□□□ -0.37
Ubfd1-201ENSMUST00000033158 Atp6v0e2Q91XE7 81 aa12.73□□□□□ -0.37
Ubfd1-201ENSMUST00000033158 Igkv4-57A0A0A6YYE7 117 aa12.73□□□□□ -0.37
Ubfd1-201ENSMUST00000033158 Gm17455G3UW87 128 aa12.73□□□□□ -0.37
Ubfd1-201ENSMUST00000033158 Gm4861Q8C5A4 106 aa12.73□□□□□ -0.37
Ubfd1-201ENSMUST00000033158 Chd8Q09XV5 2582 aaKnown RBP12.73□□□□□ -0.37
Ubfd1-201ENSMUST00000033158 Glrp1E9Q9S8 174 aa12.73□□□□□ -0.37
Ubfd1-201ENSMUST00000033158 B230307C23RikQ8BLB2 64 aa12.73□□□□□ -0.37
Ubfd1-201ENSMUST00000033158 SrcapA0A087WQ44 3271 aa12.72□□□□□ -0.37
Ubfd1-201ENSMUST00000033158 P01674 108 aa12.72□□□□□ -0.37
Ubfd1-201ENSMUST00000033158 Zc2hc1bQ9D534 172 aa12.72□□□□□ -0.37
Ubfd1-201ENSMUST00000033158 Gm17359A0A0G2JEB7 487 aa12.72□□□□□ -0.37
Ubfd1-201ENSMUST00000033158 NpyP57774 97 aa12.72□□□□□ -0.37
Ubfd1-201ENSMUST00000033158 Zfp951A0A087WRH0 451 aa12.72□□□□□ -0.37
Ubfd1-201ENSMUST00000033158 Inafm2A0A1L1STD6 152 aa12.71□□□□□ -0.37
Ubfd1-201ENSMUST00000033158 Atp5g3P56384 141 aa12.71□□□□□ -0.37
Ubfd1-201ENSMUST00000033158 Plscr4P58196 326 aa12.71□□□□□ -0.37
Ubfd1-201ENSMUST00000033158 Col24a1Q30D77 1733 aa12.71□□□□□ -0.37
Ubfd1-201ENSMUST00000033158 Defb47Q30KN1 79 aa12.71□□□□□ -0.37
Ubfd1-201ENSMUST00000033158 Atp5g1Q9CR84 136 aa12.71□□□□□ -0.37
Ubfd1-201ENSMUST00000033158 PemtQ61907 199 aa12.71□□□□□ -0.37
Ubfd1-201ENSMUST00000033158 Gm5468Q8C3D3 155 aa12.71□□□□□ -0.37
Ubfd1-201ENSMUST00000033158 Cfap126Q6P8X9 189 aa12.71□□□□□ -0.38
Ubfd1-201ENSMUST00000033158 Rp1l1Q8CGM2 1859 aa12.71□□□□□ -0.38
Ubfd1-201ENSMUST00000033158 C920008G01RikA0A0B4J1N1 112 aa12.71□□□□□ -0.38
Ubfd1-201ENSMUST00000033158 Tln1P26039 2541 aaKnown RBP12.7□□□□□ -0.38
Ubfd1-201ENSMUST00000033158 PkigO70139 76 aa12.7□□□□□ -0.38
Ubfd1-201ENSMUST00000033158 PrcdQ00LT2 53 aa12.7□□□□□ -0.38
Ubfd1-201ENSMUST00000033158 Defa27F2Z403 93 aa12.7□□□□□ -0.38
Ubfd1-201ENSMUST00000033158 Prh1P05142 261 aa12.7□□□□□ -0.38
Ubfd1-201ENSMUST00000033158 Q9CX25 107 aa12.69□□□□□ -0.38
Ubfd1-201ENSMUST00000033158 P01728 117 aa12.69□□□□□ -0.38
Ubfd1-201ENSMUST00000033158 Lmo4P61969 165 aa12.69□□□□□ -0.38
Ubfd1-201ENSMUST00000033158 Hrct1Q9D6B9 109 aa12.69□□□□□ -0.38
Ubfd1-201ENSMUST00000033158 Pcnx2Q5DU28 2122 aa12.69□□□□□ -0.38
Ubfd1-201ENSMUST00000033158 Pet100P0DJE0 76 aa12.69□□□□□ -0.38
Ubfd1-201ENSMUST00000033158 Ppp1r32Q148A4 427 aa12.69□□□□□ -0.38
Ubfd1-201ENSMUST00000033158 Nup210Q9QY81 1886 aaKnown RBP12.69□□□□□ -0.38
Ubfd1-201ENSMUST00000033158 Pkd1l2Q7TN88 2461 aa12.68□□□□□ -0.38
Ubfd1-201ENSMUST00000033158 Trav4d-3A0A075B625 110 aa12.68□□□□□ -0.38
Ubfd1-201ENSMUST00000033158 Ang3P97802 145 aa12.68□□□□□ -0.38
Ubfd1-201ENSMUST00000033158 Defa21Q8C1P2 93 aa12.68□□□□□ -0.38
Ubfd1-201ENSMUST00000033158 BB014433Q8C5R5 389 aa12.68□□□□□ -0.38
Ubfd1-201ENSMUST00000033158 Ndufa4l2Q4FZG9 87 aa12.67□□□□□ -0.38
Ubfd1-201ENSMUST00000033158 CrygcQ61597 174 aa12.67□□□□□ -0.38
Ubfd1-201ENSMUST00000033158 Pcnx3Q8VI59 2028 aa12.67□□□□□ -0.38
Ubfd1-201ENSMUST00000033158 BC067074F6RXI4 2391 aa12.67□□□□□ -0.38
Ubfd1-201ENSMUST00000033158 Ramp1Q9WTJ5 148 aa12.67□□□□□ -0.38
Ubfd1-201ENSMUST00000033158 Gm5878E9PUB3 99 aa12.67□□□□□ -0.38
Ubfd1-201ENSMUST00000033158 Iglc1A0A0G2JE99 106 aa12.66□□□□□ -0.38
Ubfd1-201ENSMUST00000033158 P01843 105 aa12.66□□□□□ -0.38
Retrieved 100 of 22,080 RNA–protein pairs in 65.5 ms