RNA–Protein interactions for RNA: ENSMUST00000028769.12

Ptpra-201, Transcript of Receptor-type tyrosine-protein phosphatase alpha, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ptpra, Length 3,227 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ptpra-201ENSMUST00000028769 Plac1Q9JI83 173 aa13.37□□□□□ -0.27
Ptpra-201ENSMUST00000028769 Cxcl14Q9WUQ5 99 aa13.37□□□□□ -0.27
Ptpra-201ENSMUST00000028769 Tcte2E9PY37 120 aa13.37□□□□□ -0.27
Ptpra-201ENSMUST00000028769 Spink13Q3UTS8 97 aa13.37□□□□□ -0.27
Ptpra-201ENSMUST00000028769 Setd2E9Q5F9 2537 aa13.36□□□□□ -0.27
Ptpra-201ENSMUST00000028769 Tcrg-C3L7N479 172 aa13.36□□□□□ -0.27
Ptpra-201ENSMUST00000028769 P03985 172 aa13.36□□□□□ -0.27
Ptpra-201ENSMUST00000028769 CnfnQ6PCW6 111 aa13.36□□□□□ -0.27
Ptpra-201ENSMUST00000028769 Spink12Q9D256 87 aa13.36□□□□□ -0.27
Ptpra-201ENSMUST00000028769 Tnfrsf23Q9ER63 176 aa13.36□□□□□ -0.27
Ptpra-201ENSMUST00000028769 Q5BN45 167 aa13.35□□□□□ -0.27
Ptpra-201ENSMUST00000028769 Esp24A8R0V6 68 aa13.35□□□□□ -0.27
Ptpra-201ENSMUST00000028769 Gm5629P06327 117 aa13.35□□□□□ -0.27
Ptpra-201ENSMUST00000028769 Crip3Q6Q6R3 243 aa13.35□□□□□ -0.27
Ptpra-201ENSMUST00000028769 Gm14137Q8CE97 175 aa13.35□□□□□ -0.27
Ptpra-201ENSMUST00000028769 Ormdl2Q9CQZ0 153 aa13.35□□□□□ -0.27
Ptpra-201ENSMUST00000028769 OdaphJ3QNT8 126 aa13.34□□□□□ -0.27
Ptpra-201ENSMUST00000028769 Pgpep1Q9ESW8 209 aa13.34□□□□□ -0.27
Ptpra-201ENSMUST00000028769 Ighv1-50A0A075B5W1 117 aa13.34□□□□□ -0.27
Ptpra-201ENSMUST00000028769 Trav9-2A0A075B647 113 aa13.34□□□□□ -0.27
Ptpra-201ENSMUST00000028769 Trav9-4A0A0B4J1K2 113 aa13.34□□□□□ -0.27
Ptpra-201ENSMUST00000028769 Srsf2Q62093 221 aaKnown RBP13.34□□□□□ -0.27
Ptpra-201ENSMUST00000028769 Srsf9Q9D0B0 222 aaKnown RBP13.34□□□□□ -0.27
Ptpra-201ENSMUST00000028769 Zfp462B1AWL2 2495 aaKnown RBP13.34□□□□□ -0.27
Ptpra-201ENSMUST00000028769 Ighv1-64A0A075B5X3 117 aa13.34□□□□□ -0.27
Ptpra-201ENSMUST00000028769 Znhit3Q9CQK1 151 aa13.33□□□□□ -0.28
Ptpra-201ENSMUST00000028769 Hbb-bsA8DUK4 147 aa13.33□□□□□ -0.28
Ptpra-201ENSMUST00000028769 Hbb-b1P02088 147 aa13.33□□□□□ -0.28
Ptpra-201ENSMUST00000028769 Ighv1-58A0A075B5W9 117 aa13.32□□□□□ -0.28
Ptpra-201ENSMUST00000028769 Ighv1-12A0A0A6YXJ9 117 aa13.32□□□□□ -0.28
Ptpra-201ENSMUST00000028769 Gm35549A0A0N4SUS7 141 aa13.32□□□□□ -0.28
Ptpra-201ENSMUST00000028769 Gm45785A0A1B0GT05 94 aa13.32□□□□□ -0.28
Ptpra-201ENSMUST00000028769 Gm21994F6T2D2 329 aa13.32□□□□□ -0.28
Ptpra-201ENSMUST00000028769 Sprr3O09116 238 aa13.32□□□□□ -0.28
Ptpra-201ENSMUST00000028769 Gm5464Q3UY29 175 aa13.32□□□□□ -0.28
Ptpra-201ENSMUST00000028769 Rab37Q9JKM7 223 aa13.32□□□□□ -0.28
Ptpra-201ENSMUST00000028769 Gm9925F6T2U3 160 aa13.32□□□□□ -0.28
Ptpra-201ENSMUST00000028769 Zc2hc1bQ9D534 172 aa13.32□□□□□ -0.28
Ptpra-201ENSMUST00000028769 P01811 117 aa13.32□□□□□ -0.28
Ptpra-201ENSMUST00000028769 Foxi2Q3I5G5 311 aa13.32□□□□□ -0.28
Ptpra-201ENSMUST00000028769 SrarpQ3ULG3 163 aa13.32□□□□□ -0.28
Ptpra-201ENSMUST00000028769 Gm2564F6Z9S8 108 aa13.31□□□□□ -0.28
Ptpra-201ENSMUST00000028769 Pip4p1Q3TWL2 284 aa13.31□□□□□ -0.28
Ptpra-201ENSMUST00000028769 Usmg5Q78IK2 58 aa13.3□□□□□ -0.28
Ptpra-201ENSMUST00000028769 2310009B15RikA0A0A6YWI4 143 aa13.3□□□□□ -0.28
Ptpra-201ENSMUST00000028769 Gm28269A0A087WSG3 125 aa13.3□□□□□ -0.28
Ptpra-201ENSMUST00000028769 BC106179Q8C9L1 186 aa13.3□□□□□ -0.28
Ptpra-201ENSMUST00000028769 Ociad2Q9D8W7 154 aa13.3□□□□□ -0.28
Ptpra-201ENSMUST00000028769 Ndufb4Q9CQC7 129 aa13.29□□□□□ -0.28
Ptpra-201ENSMUST00000028769 FlnaQ8BTM8 2647 aaKnown RBP13.29□□□□□ -0.28
Ptpra-201ENSMUST00000028769 NrepQ07475 68 aa13.29□□□□□ -0.28
Ptpra-201ENSMUST00000028769 Ndufs7Q9DC70 224 aa13.29□□□□□ -0.28
Ptpra-201ENSMUST00000028769 Wfdc15aQ8BH89 80 aa13.28□□□□□ -0.28
Ptpra-201ENSMUST00000028769 Ighv2-7A0A075B5Q8 116 aa13.28□□□□□ -0.28
Ptpra-201ENSMUST00000028769 P01837 106 aa13.28□□□□□ -0.28
Ptpra-201ENSMUST00000028769 Clec5aQ9R007 190 aa13.28□□□□□ -0.28
Ptpra-201ENSMUST00000028769 Usp24B1AY13 2617 aaKnown RBP13.28□□□□□ -0.28
Ptpra-201ENSMUST00000028769 Fam240bJ3QMB3 78 aa13.28□□□□□ -0.28
Ptpra-201ENSMUST00000028769 Tal2Q62282 108 aa13.28□□□□□ -0.28
Ptpra-201ENSMUST00000028769 SNORCQ9CXL7 121 aa13.28□□□□□ -0.28
Ptpra-201ENSMUST00000028769 Smim1P0C8K7 78 aa13.27□□□□□ -0.28
Ptpra-201ENSMUST00000028769 Runx1Q03347 451 aa13.27□□□□□ -0.28
Ptpra-201ENSMUST00000028769 Unc79Q0KK59 2596 aa13.27□□□□□ -0.29
Ptpra-201ENSMUST00000028769 F11rO88792 300 aa13.27□□□□□ -0.29
Ptpra-201ENSMUST00000028769 Pla2g2aP31482 146 aa13.27□□□□□ -0.29
Ptpra-201ENSMUST00000028769 Usp9yF8VPU6 2556 aa13.27□□□□□ -0.29
Ptpra-201ENSMUST00000028769 S100a8P27005 89 aa13.26□□□□□ -0.29
Ptpra-201ENSMUST00000028769 Prss29Q99MS4 279 aa13.26□□□□□ -0.29
Ptpra-201ENSMUST00000028769 Klk5Q9D140 293 aa13.26□□□□□ -0.29
Ptpra-201ENSMUST00000028769 Epg5Q80TA9 2572 aa13.26□□□□□ -0.29
Ptpra-201ENSMUST00000028769 Triap1Q9D8Z2 76 aa13.26□□□□□ -0.29
Ptpra-201ENSMUST00000028769 Nat8b-psE0CYC6 232 aa13.26□□□□□ -0.29
Ptpra-201ENSMUST00000028769 Gm17732E9Q5I2 61 aa13.26□□□□□ -0.29
Ptpra-201ENSMUST00000028769 Cited2O35740 269 aa13.25□□□□□ -0.29
Ptpra-201ENSMUST00000028769 Esp4A8R0T8 117 aa13.25□□□□□ -0.29
Ptpra-201ENSMUST00000028769 1810032O08RikE9PZV8 113 aa13.25□□□□□ -0.29
Ptpra-201ENSMUST00000028769 AamdcQ8R0P4 122 aa13.25□□□□□ -0.29
Ptpra-201ENSMUST00000028769 Cyyr1Q8VIH7 165 aa13.25□□□□□ -0.29
Ptpra-201ENSMUST00000028769 Gm5819E9PZ96 154 aa13.24□□□□□ -0.29
Ptpra-201ENSMUST00000028769 Shisa9Q9CZN4 424 aa13.24□□□□□ -0.29
Ptpra-201ENSMUST00000028769 Vamp8O70404 101 aa13.24□□□□□ -0.29
Ptpra-201ENSMUST00000028769 Cd69P37217 199 aa13.24□□□□□ -0.29
Ptpra-201ENSMUST00000028769 Gm94Q3V2D2 93 aa13.24□□□□□ -0.29
Ptpra-201ENSMUST00000028769 Ss18Q62280 418 aa13.24□□□□□ -0.29
Ptpra-201ENSMUST00000028769 Cox11Q6P8I6 275 aa13.24□□□□□ -0.29
Ptpra-201ENSMUST00000028769 Psmb11Q8BG41 302 aa13.24□□□□□ -0.29
Ptpra-201ENSMUST00000028769 Cox7cP17665 63 aa13.23□□□□□ -0.29
Ptpra-201ENSMUST00000028769 Avpi1Q9D7H4 142 aa13.23□□□□□ -0.29
Ptpra-201ENSMUST00000028769 Q9DAB9 146 aa13.23□□□□□ -0.29
Ptpra-201ENSMUST00000028769 Dynlrb2Q9DAJ5 96 aa13.23□□□□□ -0.29
Ptpra-201ENSMUST00000028769 Iah1Q9DB29 249 aa13.23□□□□□ -0.29
Ptpra-201ENSMUST00000028769 Ighv14-1A0A075B5R4 117 aa13.23□□□□□ -0.29
Ptpra-201ENSMUST00000028769 C920008G01RikA0A0B4J1N1 112 aa13.23□□□□□ -0.29
Ptpra-201ENSMUST00000028769 P01753 117 aa13.23□□□□□ -0.29
Ptpra-201ENSMUST00000028769 Snrpd3P62320 126 aaKnown RBP13.23□□□□□ -0.29
Ptpra-201ENSMUST00000028769 Gm21748Q3UE70 102 aa13.23□□□□□ -0.29
Ptpra-201ENSMUST00000028769 FcorP0DJI6 106 aa13.22□□□□□ -0.29
Ptpra-201ENSMUST00000028769 Tmem238A9JSM3 176 aa13.21□□□□□ -0.29
Ptpra-201ENSMUST00000028769 Lgals6O54891 301 aa13.21□□□□□ -0.29
Ptpra-201ENSMUST00000028769 Fam222aQ6PGH4 453 aa13.21□□□□□ -0.29
Retrieved 100 of 22,080 RNA–protein pairs in 40.6 ms