RNA–Protein interactions for RNA: ENSMUST00000201711.3

Pdgfra-205, Transcript of Platelet-derived growth factor receptor alpha, mousemouse

TSL 1 (best) BASIC

Gene Pdgfra, Length 4,088 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdgfra-205ENSMUST00000201711 Gm28038F7BCN9 126 aa10.19□□□□□ -0.78
Pdgfra-205ENSMUST00000201711 Trbv14A0A140T8L9 115 aa10.19□□□□□ -0.78
Pdgfra-205ENSMUST00000201711 Gm5941Q497P9 117 aa10.19□□□□□ -0.78
Pdgfra-205ENSMUST00000201711 Gm45521A0A1B0GRK0 198 aa10.19□□□□□ -0.78
Pdgfra-205ENSMUST00000201711 Gm9925F6T2U3 160 aa10.19□□□□□ -0.78
Pdgfra-205ENSMUST00000201711 Tmem88bQ3TYP4 173 aa10.19□□□□□ -0.78
Pdgfra-205ENSMUST00000201711 MsmbO08540 113 aa10.18□□□□□ -0.78
Pdgfra-205ENSMUST00000201711 P01748 117 aa10.18□□□□□ -0.78
Pdgfra-205ENSMUST00000201711 Ormdl2Q9CQZ0 153 aa10.18□□□□□ -0.78
Pdgfra-205ENSMUST00000201711 Ociad2Q9D8W7 154 aa10.18□□□□□ -0.78
Pdgfra-205ENSMUST00000201711 Mrps12O35680 139 aa10.18□□□□□ -0.78
Pdgfra-205ENSMUST00000201711 P01739 132 aa10.18□□□□□ -0.78
Pdgfra-205ENSMUST00000201711 P0C913 63 aa10.18□□□□□ -0.78
Pdgfra-205ENSMUST00000201711 NrepQ07475 68 aa10.18□□□□□ -0.78
Pdgfra-205ENSMUST00000201711 Samd10Q7TST3 202 aa10.18□□□□□ -0.78
Pdgfra-205ENSMUST00000201711 Ifitm10Q8BR26 201 aa10.18□□□□□ -0.78
Pdgfra-205ENSMUST00000201711 RhohQ9D3G9 191 aa10.18□□□□□ -0.78
Pdgfra-205ENSMUST00000201711 NbeaQ9EPN1 2936 aa10.18□□□□□ -0.78
Pdgfra-205ENSMUST00000201711 Usp9yF8VPU6 2556 aa10.18□□□□□ -0.78
Pdgfra-205ENSMUST00000201711 Iah1Q9DB29 249 aa10.18□□□□□ -0.78
Pdgfra-205ENSMUST00000201711 Esp24A8R0V6 68 aa10.18□□□□□ -0.78
Pdgfra-205ENSMUST00000201711 Ly86O88188 162 aa10.18□□□□□ -0.78
Pdgfra-205ENSMUST00000201711 Sumo2P61957 95 aaKnown RBP10.18□□□□□ -0.78
Pdgfra-205ENSMUST00000201711 Znf575Q3TXZ1 239 aa10.18□□□□□ -0.78
Pdgfra-205ENSMUST00000201711 Sdhaf1Q3U276 118 aa10.18□□□□□ -0.78
Pdgfra-205ENSMUST00000201711 4930544G11RikQ9CR99 193 aa10.18□□□□□ -0.78
Pdgfra-205ENSMUST00000201711 Rpl36-ps4A0A140T8U4 117 aa10.17□□□□□ -0.78
Pdgfra-205ENSMUST00000201711 Wfdc2Q9DAU7 174 aa10.17□□□□□ -0.78
Pdgfra-205ENSMUST00000201711 Trav9-2A0A075B647 113 aa10.17□□□□□ -0.78
Pdgfra-205ENSMUST00000201711 Trav9-4A0A0B4J1K2 113 aa10.17□□□□□ -0.78
Pdgfra-205ENSMUST00000201711 HampQ9EQ21 83 aa10.17□□□□□ -0.78
Pdgfra-205ENSMUST00000201711 Gm15294V9GXA7 121 aa10.17□□□□□ -0.78
Pdgfra-205ENSMUST00000201711 Trav14-2A0A075B694 121 aa10.17□□□□□ -0.78
Pdgfra-205ENSMUST00000201711 Reg3gO09049 174 aa10.17□□□□□ -0.78
Pdgfra-205ENSMUST00000201711 Rpl35aO55142 110 aa10.17□□□□□ -0.78
Pdgfra-205ENSMUST00000201711 Sap30O88574 220 aa10.17□□□□□ -0.78
Pdgfra-205ENSMUST00000201711 P01750 117 aa10.17□□□□□ -0.78
Pdgfra-205ENSMUST00000201711 Q9D131 166 aa10.17□□□□□ -0.78
Pdgfra-205ENSMUST00000201711 Tmem238A9JSM3 176 aa10.16□□□□□ -0.78
Pdgfra-205ENSMUST00000201711 P01756 117 aa10.16□□□□□ -0.78
Pdgfra-205ENSMUST00000201711 P01757 117 aa10.16□□□□□ -0.78
Pdgfra-205ENSMUST00000201711 NpsP0C0P8 89 aa10.16□□□□□ -0.78
Pdgfra-205ENSMUST00000201711 Hint1P70349 126 aaKnown RBP10.16□□□□□ -0.78
Pdgfra-205ENSMUST00000201711 Q9CX25 107 aa10.16□□□□□ -0.78
Pdgfra-205ENSMUST00000201711 Klk1b4P00757 256 aa10.16□□□□□ -0.78
Pdgfra-205ENSMUST00000201711 Ighv3-1A0A075B5S6 116 aa10.16□□□□□ -0.78
Pdgfra-205ENSMUST00000201711 Olfr312Q7TRZ9 308 aa10.16□□□□□ -0.78
Pdgfra-205ENSMUST00000201711 Klf13Q9JJZ6 289 aa10.16□□□□□ -0.78
Pdgfra-205ENSMUST00000201711 Rab37Q9JKM7 223 aa10.16□□□□□ -0.78
Pdgfra-205ENSMUST00000201711 Ighv1-64A0A075B5X3 117 aa10.15□□□□□ -0.78
Pdgfra-205ENSMUST00000201711 Brd3osA0A1B0GRB6 84 aa10.15□□□□□ -0.78
Pdgfra-205ENSMUST00000201711 Gm7257D3YX25 99 aa10.15□□□□□ -0.78
Pdgfra-205ENSMUST00000201711 Gm7075D3Z497 112 aa10.15□□□□□ -0.78
Pdgfra-205ENSMUST00000201711 PolP10400 120 aa10.15□□□□□ -0.78
Pdgfra-205ENSMUST00000201711 Ccl24Q9JKC0 119 aa10.15□□□□□ -0.78
Pdgfra-205ENSMUST00000201711 Phlda3Q9WV95 125 aa10.15□□□□□ -0.78
Pdgfra-205ENSMUST00000201711 PtprqP0C5E4 2300 aa10.15□□□□□ -0.78
Pdgfra-205ENSMUST00000201711 Hbb-bsA8DUK4 147 aa10.15□□□□□ -0.78
Pdgfra-205ENSMUST00000201711 Gm26727M0QWT1 121 aa10.15□□□□□ -0.78
Pdgfra-205ENSMUST00000201711 Vamp8O70404 101 aa10.15□□□□□ -0.78
Pdgfra-205ENSMUST00000201711 Hbb-b1P02088 147 aa10.15□□□□□ -0.78
Pdgfra-205ENSMUST00000201711 Ss18Q62280 418 aa10.15□□□□□ -0.78
Pdgfra-205ENSMUST00000201711 Gm45717A0A1B0GT68 152 aa10.15□□□□□ -0.79
Pdgfra-205ENSMUST00000201711 Higd1aQ9JLR9 95 aa10.15□□□□□ -0.79
Pdgfra-205ENSMUST00000201711 Igkv2-137A0A0B4J1H6 120 aa10.14□□□□□ -0.79
Pdgfra-205ENSMUST00000201711 Cd69P37217 199 aa10.14□□□□□ -0.79
Pdgfra-205ENSMUST00000201711 Ighv1-12A0A0A6YXJ9 117 aa10.14□□□□□ -0.79
Pdgfra-205ENSMUST00000201711 Trav3-1Q5R1I8 114 aa10.14□□□□□ -0.79
Pdgfra-205ENSMUST00000201711 Spata45Q9CVW4 97 aa10.14□□□□□ -0.79
Pdgfra-205ENSMUST00000201711 H1fxQ80ZM5 188 aa10.14□□□□□ -0.79
Pdgfra-205ENSMUST00000201711 Prss29Q99MS4 279 aa10.14□□□□□ -0.79
Pdgfra-205ENSMUST00000201711 Gm2564F6Z9S8 108 aa10.13□□□□□ -0.79
Pdgfra-205ENSMUST00000201711 Erdr1J3QMM0 206 aa10.13□□□□□ -0.79
Pdgfra-205ENSMUST00000201711 Ccl19O70460 108 aa10.13□□□□□ -0.79
Pdgfra-205ENSMUST00000201711 P01811 117 aa10.13□□□□□ -0.79
Pdgfra-205ENSMUST00000201711 P01820 115 aa10.13□□□□□ -0.79
Pdgfra-205ENSMUST00000201711 Gm11020F6ZGD5 61 aa10.13□□□□□ -0.79
Pdgfra-205ENSMUST00000201711 Znf239P24399 201 aa10.13□□□□□ -0.79
Pdgfra-205ENSMUST00000201711 Gm7489Q3UT34 171 aa10.13□□□□□ -0.79
Pdgfra-205ENSMUST00000201711 Il1f10Q8R459 152 aa10.13□□□□□ -0.79
Pdgfra-205ENSMUST00000201711 UrahQ9CRB3 118 aa10.13□□□□□ -0.79
Pdgfra-205ENSMUST00000201711 Ighv1-50A0A075B5W1 117 aa10.12□□□□□ -0.79
Pdgfra-205ENSMUST00000201711 Tdgf1P51865 171 aa10.12□□□□□ -0.79
Pdgfra-205ENSMUST00000201711 Trbv30A0A0B4J1P1 111 aa10.12□□□□□ -0.79
Pdgfra-205ENSMUST00000201711 Scgb1b24B1B0N6 92 aa10.12□□□□□ -0.79
Pdgfra-205ENSMUST00000201711 CrxO54751 299 aa10.12□□□□□ -0.79
Pdgfra-205ENSMUST00000201711 Lgals6O54891 301 aa10.12□□□□□ -0.79
Pdgfra-205ENSMUST00000201711 Gm10604Q3V0X7 143 aa10.12□□□□□ -0.79
Pdgfra-205ENSMUST00000201711 Chac1Q8R3J5 223 aa10.12□□□□□ -0.79
Pdgfra-205ENSMUST00000201711 Atp6v0bQ91V37 205 aa10.12□□□□□ -0.79
Pdgfra-205ENSMUST00000201711 Ighv1-23A0A0A6YVW3 117 aa10.12□□□□□ -0.79
Pdgfra-205ENSMUST00000201711 Gm6812B1AXU1 112 aa10.12□□□□□ -0.79
Pdgfra-205ENSMUST00000201711 Tal2Q62282 108 aa10.12□□□□□ -0.79
Pdgfra-205ENSMUST00000201711 Odf3l1Q810P2 275 aa10.12□□□□□ -0.79
Pdgfra-205ENSMUST00000201711 Nat8b-psE0CYC6 232 aa10.12□□□□□ -0.79
Pdgfra-205ENSMUST00000201711 Foxc2Q61850 494 aa10.12□□□□□ -0.79
Pdgfra-205ENSMUST00000201711 Ndufa4Q62425 82 aaKnown RBP10.11□□□□□ -0.79
Pdgfra-205ENSMUST00000201711 Cyyr1Q8VIH7 165 aa10.11□□□□□ -0.79
Pdgfra-205ENSMUST00000201711 Gm5089A1L3C8 106 aa10.11□□□□□ -0.79
Pdgfra-205ENSMUST00000201711 Gm21370Q3T9V6 190 aa10.11□□□□□ -0.79
Retrieved 100 of 22,080 RNA–protein pairs in 10.7 ms