RNA–Protein interactions for RNA: ENSMUST00000160721.7

Pcdh1-203, Transcript of Protocadherin 1 (Fragment), mousemouse

TSL 5 BASIC

Gene Pcdh1, Length 5,416 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1-203ENSMUST00000160721 P01786 117 aa12.59□□□□□ -0.39
Pcdh1-203ENSMUST00000160721 Ighv1-23A0A0A6YVW3 117 aa12.59□□□□□ -0.39
Pcdh1-203ENSMUST00000160721 Trav4n-4A0A075B615 110 aa12.59□□□□□ -0.39
Pcdh1-203ENSMUST00000160721 GhrhP16043 103 aa12.59□□□□□ -0.39
Pcdh1-203ENSMUST00000160721 Pygo2Q80V76 405 aa12.59□□□□□ -0.39
Pcdh1-203ENSMUST00000160721 BB014433Q8C5R5 389 aa12.59□□□□□ -0.39
Pcdh1-203ENSMUST00000160721 Gm17455G3UW87 128 aa12.59□□□□□ -0.39
Pcdh1-203ENSMUST00000160721 Defb29Q8BGW9 78 aa12.59□□□□□ -0.39
Pcdh1-203ENSMUST00000160721 Hoxd3P09027 433 aa12.58□□□□□ -0.4
Pcdh1-203ENSMUST00000160721 CstadQ9D245 104 aa12.58□□□□□ -0.4
Pcdh1-203ENSMUST00000160721 4933414I15RikQ9D4D5 133 aa12.58□□□□□ -0.4
Pcdh1-203ENSMUST00000160721 Tmem14cQ9CQN6 114 aa12.58□□□□□ -0.4
Pcdh1-203ENSMUST00000160721 Cdpf1Q8R3A2 119 aa12.58□□□□□ -0.4
Pcdh1-203ENSMUST00000160721 4930442H23RikQ9D5G7 103 aa12.58□□□□□ -0.4
Pcdh1-203ENSMUST00000160721 Morn5Q9DAI9 170 aa12.58□□□□□ -0.4
Pcdh1-203ENSMUST00000160721 Map6d1Q14BB9 191 aa12.58□□□□□ -0.4
Pcdh1-203ENSMUST00000160721 P04945 108 aa12.57□□□□□ -0.4
Pcdh1-203ENSMUST00000160721 Cyyr1Q8VIH7 165 aa12.57□□□□□ -0.4
Pcdh1-203ENSMUST00000160721 Trav12d-3A0A075B6A4 115 aa12.57□□□□□ -0.4
Pcdh1-203ENSMUST00000160721 Gm10638F6QEG2 257 aa12.57□□□□□ -0.4
Pcdh1-203ENSMUST00000160721 Gm9961Q8BNV2 113 aa12.57□□□□□ -0.4
Pcdh1-203ENSMUST00000160721 Smim10l1A0A087WNQ7 89 aa12.57□□□□□ -0.4
Pcdh1-203ENSMUST00000160721 Zc2hc1aQ8BJH1 324 aa12.57□□□□□ -0.4
Pcdh1-203ENSMUST00000160721 Mrps12O35680 139 aa12.57□□□□□ -0.4
Pcdh1-203ENSMUST00000160721 NpsP0C0P8 89 aa12.57□□□□□ -0.4
Pcdh1-203ENSMUST00000160721 Zfp36l1P23950 338 aa12.57□□□□□ -0.4
Pcdh1-203ENSMUST00000160721 Col8a2P25318 699 aa12.57□□□□□ -0.4
Pcdh1-203ENSMUST00000160721 Slc25a29Q8BL03 306 aa12.56□□□□□ -0.4
Pcdh1-203ENSMUST00000160721 Fam24aQ8CF27 98 aa12.56□□□□□ -0.4
Pcdh1-203ENSMUST00000160721 Mpv17l2Q8VIK2 200 aa12.56□□□□□ -0.4
Pcdh1-203ENSMUST00000160721 Dmrtc1c1Q9D410 238 aa12.56□□□□□ -0.4
Pcdh1-203ENSMUST00000160721 Wdr90Q6ZPG2 1874 aa12.56□□□□□ -0.4
Pcdh1-203ENSMUST00000160721 Pkd1l2Q7TN88 2461 aa12.56□□□□□ -0.4
Pcdh1-203ENSMUST00000160721 Wfdc2Q9DAU7 174 aa12.56□□□□□ -0.4
Pcdh1-203ENSMUST00000160721 Trav6-6A0A075B603 114 aa12.56□□□□□ -0.4
Pcdh1-203ENSMUST00000160721 Fam216bQ8CC14 138 aa12.56□□□□□ -0.4
Pcdh1-203ENSMUST00000160721 Ss18l2Q9D174 77 aa12.56□□□□□ -0.4
Pcdh1-203ENSMUST00000160721 Gm20730A0A075B5J6 119 aa12.55□□□□□ -0.4
Pcdh1-203ENSMUST00000160721 Rspo3Q2TJ95 277 aa12.55□□□□□ -0.4
Pcdh1-203ENSMUST00000160721 Igkv4-57A0A0A6YYE7 117 aa12.55□□□□□ -0.4
Pcdh1-203ENSMUST00000160721 Lgals4Q8K419 326 aa12.55□□□□□ -0.4
Pcdh1-203ENSMUST00000160721 BC048502Q80Y74 154 aa12.55□□□□□ -0.4
Pcdh1-203ENSMUST00000160721 Col4a4Q9QZR9 1682 aa12.55□□□□□ -0.4
Pcdh1-203ENSMUST00000160721 Rbmy1bQ60990 380 aa12.55□□□□□ -0.4
Pcdh1-203ENSMUST00000160721 March3Q8BRX9 218 aa12.55□□□□□ -0.4
Pcdh1-203ENSMUST00000160721 Prr12E9PYL2 2035 aaKnown RBP12.54□□□□□ -0.4
Pcdh1-203ENSMUST00000160721 Defb47Q30KN1 79 aa12.54□□□□□ -0.4
Pcdh1-203ENSMUST00000160721 Lage3Q9CR70 148 aa12.54□□□□□ -0.4
Pcdh1-203ENSMUST00000160721 Reg3gO09049 174 aa12.54□□□□□ -0.4
Pcdh1-203ENSMUST00000160721 P06330 118 aa12.54□□□□□ -0.4
Pcdh1-203ENSMUST00000160721 Dad1P61804 113 aa12.54□□□□□ -0.4
Pcdh1-203ENSMUST00000160721 Q08AU9 97 aa12.54□□□□□ -0.4
Pcdh1-203ENSMUST00000160721 Nckap5E9QAE1 1909 aa12.53□□□□□ -0.4
Pcdh1-203ENSMUST00000160721 Rp1l1Q8CGM2 1859 aa12.53□□□□□ -0.4
Pcdh1-203ENSMUST00000160721 Ndufa12Q7TMF3 145 aaKnown RBP12.53□□□□□ -0.4
Pcdh1-203ENSMUST00000160721 Tmem210Q9D2F0 147 aa12.53□□□□□ -0.4
Pcdh1-203ENSMUST00000160721 Ccl24Q9JKC0 119 aa12.53□□□□□ -0.4
Pcdh1-203ENSMUST00000160721 Igkv4-58A0A0G2JGI6 119 aa12.52□□□□□ -0.4
Pcdh1-203ENSMUST00000160721 Edn1P22387 202 aa12.52□□□□□ -0.4
Pcdh1-203ENSMUST00000160721 Ighv1-64A0A075B5X3 117 aa12.52□□□□□ -0.4
Pcdh1-203ENSMUST00000160721 Ighv5-9-1A0A0A6YVS4 126 aa12.52□□□□□ -0.4
Pcdh1-203ENSMUST00000160721 FancmQ8BGE5 2021 aa12.52□□□□□ -0.41
Pcdh1-203ENSMUST00000160721 Zmat4Q8BZ94 229 aa12.52□□□□□ -0.41
Pcdh1-203ENSMUST00000160721 Golgb1E9PVZ8 3238 aa12.52□□□□□ -0.41
Pcdh1-203ENSMUST00000160721 Gm17324Q8C6J8 137 aa12.52□□□□□ -0.41
Pcdh1-203ENSMUST00000160721 Ighv1-74A0A0G2JGK2 117 aa12.52□□□□□ -0.41
Pcdh1-203ENSMUST00000160721 Gm20499D3Z4G5 72 aa12.52□□□□□ -0.41
Pcdh1-203ENSMUST00000160721 P01643 108 aa12.52□□□□□ -0.41
Pcdh1-203ENSMUST00000160721 Fer1l4A3KGK3 1992 aa12.51□□□□□ -0.41
Pcdh1-203ENSMUST00000160721 Tmem243B2RVB9 118 aa12.51□□□□□ -0.41
Pcdh1-203ENSMUST00000160721 Olfr311Q5NC59 308 aa12.51□□□□□ -0.41
Pcdh1-203ENSMUST00000160721 Oxld1Q9CR10 201 aa12.51□□□□□ -0.41
Pcdh1-203ENSMUST00000160721 SelenowP63300 88 aa12.5□□□□□ -0.41
Pcdh1-203ENSMUST00000160721 Pcsk5Q04592 1877 aa12.5□□□□□ -0.41
Pcdh1-203ENSMUST00000160721 P01739 132 aa12.5□□□□□ -0.41
Pcdh1-203ENSMUST00000160721 BC048562Q80ZQ7 204 aa12.5□□□□□ -0.41
Pcdh1-203ENSMUST00000160721 Alms1Q8K4E0 3251 aa12.5□□□□□ -0.41
Pcdh1-203ENSMUST00000160721 Igkv8-34A0A0G2JDU0 121 aa12.49□□□□□ -0.41
Pcdh1-203ENSMUST00000160721 Trbv14A0A140T8L9 115 aa12.49□□□□□ -0.41
Pcdh1-203ENSMUST00000160721 Ifitm1Q9D103 106 aa12.48□□□□□ -0.41
Pcdh1-203ENSMUST00000160721 Inafm2A0A1L1STD6 152 aa12.48□□□□□ -0.41
Pcdh1-203ENSMUST00000160721 Rbm3O89086 153 aaKnown RBP12.48□□□□□ -0.41
Pcdh1-203ENSMUST00000160721 Ighv1-4A0A075B5T4 117 aa12.48□□□□□ -0.41
Pcdh1-203ENSMUST00000160721 Gata1P17679 413 aa12.48□□□□□ -0.41
Pcdh1-203ENSMUST00000160721 Ighv1-50A0A075B5W1 117 aa12.48□□□□□ -0.41
Pcdh1-203ENSMUST00000160721 Nxph4G3X9N5 304 aa12.48□□□□□ -0.41
Pcdh1-203ENSMUST00000160721 Ociad2Q9D8W7 154 aa12.48□□□□□ -0.41
Pcdh1-203ENSMUST00000160721 Tln1P26039 2541 aaKnown RBP12.48□□□□□ -0.41
Pcdh1-203ENSMUST00000160721 Abca2P41234 2434 aa12.48□□□□□ -0.41
Pcdh1-203ENSMUST00000160721 Tnrc6aQ3UHK8 1896 aaKnown RBP12.48□□□□□ -0.41
Pcdh1-203ENSMUST00000160721 TncQ80YX1 2110 aa12.47□□□□□ -0.41
Pcdh1-203ENSMUST00000160721 Gm20481G3UXK4 153 aa12.47□□□□□ -0.41
Pcdh1-203ENSMUST00000160721 Igkv4-74A0A0B4J1I3 119 aa12.46□□□□□ -0.41
Pcdh1-203ENSMUST00000160721 Trbv13-1A0A0B4J1P8 112 aa12.46□□□□□ -0.42
Pcdh1-203ENSMUST00000160721 Cox7cP17665 63 aa12.46□□□□□ -0.42
Pcdh1-203ENSMUST00000160721 Myo9aQ8C170 2542 aa12.45□□□□□ -0.42
Pcdh1-203ENSMUST00000160721 Col5a3Q9JLI2 1739 aa12.45□□□□□ -0.42
Pcdh1-203ENSMUST00000160721 Gm3285A0A1W2P7U0 201 aa12.45□□□□□ -0.42
Pcdh1-203ENSMUST00000160721 P04940 107 aa12.45□□□□□ -0.42
Pcdh1-203ENSMUST00000160721 P04941 107 aa12.45□□□□□ -0.42
Retrieved 100 of 22,080 RNA–protein pairs in 48 ms