RNA–Protein interactions for RNA: ENSMUST00000040783.10

Usp40-201, Transcript of Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Usp40, Length 5,049 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40-201ENSMUST00000040783 GfyJ3KML8 504 aa5.89□□□□□ -1.47
Usp40-201ENSMUST00000040783 Trip12G5E870 2025 aaKnown RBP5.89□□□□□ -1.47
Usp40-201ENSMUST00000040783 Ighv8-4A0A0A6YW26 117 aa5.89□□□□□ -1.47
Usp40-201ENSMUST00000040783 Igkv4-70A0A0B4J1I5 116 aa5.89□□□□□ -1.47
Usp40-201ENSMUST00000040783 Gata1P17679 413 aa5.89□□□□□ -1.47
Usp40-201ENSMUST00000040783 VsirQ9D659 308 aa5.89□□□□□ -1.47
Usp40-201ENSMUST00000040783 Zfyve26Q5DU37 2529 aa5.88□□□□□ -1.47
Usp40-201ENSMUST00000040783 Ighv1-64A0A075B5X3 117 aa5.88□□□□□ -1.47
Usp40-201ENSMUST00000040783 P04942 107 aa5.88□□□□□ -1.47
Usp40-201ENSMUST00000040783 Ang5Q5GAN1 145 aa5.88□□□□□ -1.47
Usp40-201ENSMUST00000040783 Zc2hc1bQ9D534 172 aa5.88□□□□□ -1.47
Usp40-201ENSMUST00000040783 Gm7102J3QQ10 178 aa5.88□□□□□ -1.47
Usp40-201ENSMUST00000040783 P03980 138 aa5.88□□□□□ -1.47
Usp40-201ENSMUST00000040783 BlcapP62951 87 aa5.88□□□□□ -1.47
Usp40-201ENSMUST00000040783 Ighv1-19A0A0A6YWX0 117 aa5.88□□□□□ -1.47
Usp40-201ENSMUST00000040783 PdpnQ62011 172 aa5.88□□□□□ -1.47
Usp40-201ENSMUST00000040783 Il22ra2Q80XF5 230 aa5.88□□□□□ -1.47
Usp40-201ENSMUST00000040783 Chchd5Q9CQP3 110 aa5.88□□□□□ -1.47
Usp40-201ENSMUST00000040783 OtorQ9JIE3 128 aa5.88□□□□□ -1.47
Usp40-201ENSMUST00000040783 Gm26938S4R185 226 aa5.88□□□□□ -1.47
Usp40-201ENSMUST00000040783 Obox8V9GWY9 217 aa5.88□□□□□ -1.47
Usp40-201ENSMUST00000040783 PigyP0C1P0 71 aa5.88□□□□□ -1.47
Usp40-201ENSMUST00000040783 SpinklQ8CEK3 90 aa5.88□□□□□ -1.47
Usp40-201ENSMUST00000040783 Usf3B2RUQ2 2221 aa5.87□□□□□ -1.47
Usp40-201ENSMUST00000040783 P01792 123 aa5.87□□□□□ -1.47
Usp40-201ENSMUST00000040783 Hoxb4P10284 250 aa5.87□□□□□ -1.47
Usp40-201ENSMUST00000040783 Gm10188Q3V432 135 aa5.87□□□□□ -1.47
Usp40-201ENSMUST00000040783 Taf15Q8BQ46 557 aaKnown RBP5.87□□□□□ -1.47
Usp40-201ENSMUST00000040783 Trav14n-3A0A075B645 120 aa5.87□□□□□ -1.47
Usp40-201ENSMUST00000040783 Gm9925F6T2U3 160 aa5.87□□□□□ -1.47
Usp40-201ENSMUST00000040783 Znf740Q6NZQ6 180 aa5.87□□□□□ -1.47
Usp40-201ENSMUST00000040783 Smim26Q3V460 107 aa5.87□□□□□ -1.47
Usp40-201ENSMUST00000040783 Igkv3-9A0A140T8P4 119 aa5.87□□□□□ -1.47
Usp40-201ENSMUST00000040783 Msrb3Q8BU85 253 aa5.87□□□□□ -1.47
Usp40-201ENSMUST00000040783 Bub3Q9WVA3 326 aa5.87□□□□□ -1.47
Usp40-201ENSMUST00000040783 Gm27027S4R1M6 97 aa5.87□□□□□ -1.47
Usp40-201ENSMUST00000040783 Greb1Q3UHK3 1954 aa5.87□□□□□ -1.47
Usp40-201ENSMUST00000040783 Nckap5E9QAE1 1909 aa5.87□□□□□ -1.47
Usp40-201ENSMUST00000040783 NbasE9Q411 2356 aa5.86□□□□□ -1.47
Usp40-201ENSMUST00000040783 Ighv6-7A0A0A6YWU3 119 aa5.86□□□□□ -1.47
Usp40-201ENSMUST00000040783 Gm15557A6PWY0 234 aa5.86□□□□□ -1.47
Usp40-201ENSMUST00000040783 Foxi1Q922I5 372 aa5.86□□□□□ -1.47
Usp40-201ENSMUST00000040783 Heatr5aQ5PRF0 2038 aa5.86□□□□□ -1.47
Usp40-201ENSMUST00000040783 Ighv5-6A0A075B5Q0 117 aa5.86□□□□□ -1.47
Usp40-201ENSMUST00000040783 Igkv4-71A0A0G2JEH0 117 aa5.86□□□□□ -1.47
Usp40-201ENSMUST00000040783 CrygdP04342 174 aa5.86□□□□□ -1.47
Usp40-201ENSMUST00000040783 MifP34884 115 aaKnown RBP5.86□□□□□ -1.47
Usp40-201ENSMUST00000040783 Gm20379A0A087WR34 119 aa5.86□□□□□ -1.47
Usp40-201ENSMUST00000040783 Id3P41133 119 aa5.86□□□□□ -1.47
Usp40-201ENSMUST00000040783 Crybg1A0A0G2JG52 2065 aa5.86□□□□□ -1.47
Usp40-201ENSMUST00000040783 Cfap54Q8C6S9 3106 aa5.86□□□□□ -1.47
Usp40-201ENSMUST00000040783 Gm10553J3QPF1 123 aa5.86□□□□□ -1.47
Usp40-201ENSMUST00000040783 4933414I15RikQ9D4D5 133 aa5.86□□□□□ -1.47
Usp40-201ENSMUST00000040783 HampQ9EQ21 83 aa5.86□□□□□ -1.47
Usp40-201ENSMUST00000040783 Gm10604Q3V0X7 143 aa5.85□□□□□ -1.47
Usp40-201ENSMUST00000040783 Igkv8-24A0A140T8P5 121 aa5.85□□□□□ -1.47
Usp40-201ENSMUST00000040783 Gm20708H3BKF4 155 aa5.85□□□□□ -1.47
Usp40-201ENSMUST00000040783 Socs3O35718 225 aa5.85□□□□□ -1.47
Usp40-201ENSMUST00000040783 Ighv1-50A0A075B5W1 117 aa5.85□□□□□ -1.47
Usp40-201ENSMUST00000040783 Trav4d-3A0A075B625 110 aa5.85□□□□□ -1.47
Usp40-201ENSMUST00000040783 P04943 107 aa5.85□□□□□ -1.47
Usp40-201ENSMUST00000040783 Mbd6Q3TY92 1003 aa5.85□□□□□ -1.47
Usp40-201ENSMUST00000040783 Tet2Q4JK59 1912 aaKnown RBP5.85□□□□□ -1.47
Usp40-201ENSMUST00000040783 KprpB2RUR4 657 aa5.85□□□□□ -1.47
Usp40-201ENSMUST00000040783 9130213A22RikQ3V3T2 120 aa5.85□□□□□ -1.47
Usp40-201ENSMUST00000040783 Shisa9Q9CZN4 424 aa5.85□□□□□ -1.47
Usp40-201ENSMUST00000040783 Lyg1Q9D7Q0 197 aa5.85□□□□□ -1.47
Usp40-201ENSMUST00000040783 Supt4h1bQ9Z199 117 aa5.85□□□□□ -1.47
Usp40-201ENSMUST00000040783 H2al1aQ5M8Q2 105 aa5.84□□□□□ -1.47
Usp40-201ENSMUST00000040783 Lhfpl1Q80SV1 220 aa5.84□□□□□ -1.47
Usp40-201ENSMUST00000040783 H2al1eQ810S6 105 aa5.84□□□□□ -1.47
Usp40-201ENSMUST00000040783 AtrxQ61687 2476 aaKnown RBP5.84□□□□□ -1.47
Usp40-201ENSMUST00000040783 Trav14-3A0A075B607 120 aa5.84□□□□□ -1.47
Usp40-201ENSMUST00000040783 Trav4n-4A0A075B615 110 aa5.84□□□□□ -1.47
Usp40-201ENSMUST00000040783 MsmbO08540 113 aa5.84□□□□□ -1.47
Usp40-201ENSMUST00000040783 Igkv4-81A0A0G2JEY5 119 aa5.84□□□□□ -1.48
Usp40-201ENSMUST00000040783 Igkv4-53A0A0G2JFC6 119 aa5.84□□□□□ -1.48
Usp40-201ENSMUST00000040783 P01658 132 aa5.84□□□□□ -1.48
Usp40-201ENSMUST00000040783 P01789 122 aa5.84□□□□□ -1.48
Usp40-201ENSMUST00000040783 Hoxd3P09027 433 aa5.84□□□□□ -1.48
Usp40-201ENSMUST00000040783 Pom121l2Q5SW25 972 aa5.84□□□□□ -1.48
Usp40-201ENSMUST00000040783 Sfta2E9PXB6 77 aa5.83□□□□□ -1.48
Usp40-201ENSMUST00000040783 Fam19a5Q91WE9 132 aa5.83□□□□□ -1.48
Usp40-201ENSMUST00000040783 PpdpfQ9CR37 115 aa5.83□□□□□ -1.48
Usp40-201ENSMUST00000040783 Tmem263Q9DAM7 115 aa5.83□□□□□ -1.48
Usp40-201ENSMUST00000040783 4930447F04RikA2AFR2 126 aa5.83□□□□□ -1.48
Usp40-201ENSMUST00000040783 Gm7257D3YX25 99 aa5.83□□□□□ -1.48
Usp40-201ENSMUST00000040783 9230109A22RikQ8BHE6 111 aa5.83□□□□□ -1.48
Usp40-201ENSMUST00000040783 Ubl5Q9EPV8 73 aa5.83□□□□□ -1.48
Usp40-201ENSMUST00000040783 Gm15294V9GXA7 121 aa5.83□□□□□ -1.48
Usp40-201ENSMUST00000040783 Lmo4P61969 165 aa5.83□□□□□ -1.48
Usp40-201ENSMUST00000040783 Tomm6Q9CQN3 74 aa5.83□□□□□ -1.48
Usp40-201ENSMUST00000040783 Ighv8-8A0A0A6YXQ0 119 aa5.83□□□□□ -1.48
Usp40-201ENSMUST00000040783 Gm20499D3Z4G5 72 aa5.83□□□□□ -1.48
Usp40-201ENSMUST00000040783 Ighv12-3A0A075B5T1 117 aa5.82□□□□□ -1.48
Usp40-201ENSMUST00000040783 Trav9-2A0A075B647 113 aa5.82□□□□□ -1.48
Usp40-201ENSMUST00000040783 Trav14d-1A0A075B6B1 121 aa5.82□□□□□ -1.48
Usp40-201ENSMUST00000040783 Ighv1-23A0A0A6YVW3 117 aa5.82□□□□□ -1.48
Usp40-201ENSMUST00000040783 Ighv1-12A0A0A6YXJ9 117 aa5.82□□□□□ -1.48
Usp40-201ENSMUST00000040783 Trav9-4A0A0B4J1K2 113 aa5.82□□□□□ -1.48
Retrieved 100 of 22,080 RNA–protein pairs in 100.2 ms