RNA–Protein interactions for RNA: YPR135W

CTF4, Transcript of Chromatin-associated protein, yeastyeast

Gene CTF4, Length 2,784 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTF4YPR135W LEE1Q02799 301 aaKnown RBP1.88□□□□□ -2.11
CTF4YPR135W MTQ2Q03920 221 aaPredicted RBP1.88□□□□□ -2.11
CTF4YPR135W FAP7Q12055 197 aaPredicted RBP1.88□□□□□ -2.11
CTF4YPR135W HMG2P12684 1045 aa1.87□□□□□ -2.11
CTF4YPR135W PRP4P20053 465 aaKnown RBP1.87□□□□□ -2.11
CTF4YPR135W VBA3P25594 458 aa1.87□□□□□ -2.11
CTF4YPR135W ILV6P25605 309 aaKnown RBP1.87□□□□□ -2.11
CTF4YPR135W PCL2P25693 308 aa1.87□□□□□ -2.11
CTF4YPR135W YBR053CP38235 358 aa1.87□□□□□ -2.11
CTF4YPR135W CTF8P38877 133 aa1.87□□□□□ -2.11
CTF4YPR135W PCF11P39081 626 aaPredicted RBP1.87□□□□□ -2.11
CTF4YPR135W CCM1P48237 864 aaPredicted RBP1.87□□□□□ -2.11
CTF4YPR135W SDA1P53313 767 aaKnown RBP1.87□□□□□ -2.11
CTF4YPR135W CSL4P53859 292 aaPredicted RBP1.87□□□□□ -2.11
CTF4YPR135W MRN1Q08925 612 aaKnown RBP RIP-Chip data1.87□□□□□ -2.11not detected
CTF4YPR135W HIF1Q12373 385 aa1.87□□□□□ -2.11
CTF4YPR135W RPL43AP0CX25 92 aaKnown RBP1.87□□□□□ -2.11
CTF4YPR135W RPL43BP0CX26 92 aa1.87□□□□□ -2.11
CTF4YPR135W SAM2P19358 384 aaKnown RBP1.87□□□□□ -2.11
CTF4YPR135W MFT1P33441 392 aaKnown RBP1.87□□□□□ -2.11
CTF4YPR135W YKR078WP36158 585 aaKnown RBP1.87□□□□□ -2.11
CTF4YPR135W RKM3P38222 552 aa1.87□□□□□ -2.11
CTF4YPR135W RPS7BP48164 190 aaKnown RBP1.87□□□□□ -2.11
CTF4YPR135W VIP1Q06685 1146 aaKnown RBP1.87□□□□□ -2.11
CTF4YPR135W FOB1O13329 566 aa1.87□□□□□ -2.11
CTF4YPR135W CDC9P04819 755 aa1.87□□□□□ -2.11
CTF4YPR135W SEC18P18759 758 aaKnown RBP1.87□□□□□ -2.11
CTF4YPR135W STE4P18851 423 aa1.87□□□□□ -2.11
CTF4YPR135W RFA1P22336 621 aaKnown RBP1.87□□□□□ -2.11
CTF4YPR135W PTP1P25044 335 aa1.87□□□□□ -2.11
CTF4YPR135W DPB3P27344 201 aa1.87□□□□□ -2.11
CTF4YPR135W MSS51P32335 436 aa1.87□□□□□ -2.11
CTF4YPR135W YBR284WP38150 797 aa1.87□□□□□ -2.11
CTF4YPR135W CBR1P38626 284 aaKnown RBP1.87□□□□□ -2.11
CTF4YPR135W YHL041WP38730 149 aa1.87□□□□□ -2.11
CTF4YPR135W YHR202WP38887 602 aa1.87□□□□□ -2.11
CTF4YPR135W NDE1P40215 560 aa1.87□□□□□ -2.11
CTF4YPR135W GUS1P46655 708 aaKnown RBP RIP-Chip data1.87□□□□□ -2.11not detected
CTF4YPR135W YKE2P52553 114 aa1.87□□□□□ -2.11
CTF4YPR135W PIB2P53191 635 aa1.87□□□□□ -2.11
CTF4YPR135W YML131WQ03102 365 aa1.87□□□□□ -2.11
CTF4YPR135W VMS1Q04311 632 aaKnown RBP1.87□□□□□ -2.11
CTF4YPR135W REH1Q06709 432 aa1.87□□□□□ -2.11
CTF4YPR135W IRC13Q08630 104 aa1.87□□□□□ -2.11
CTF4YPR135W RIP1P08067 215 aa1.86□□□□□ -2.11
CTF4YPR135W SRD1P09007 221 aa1.86□□□□□ -2.11
CTF4YPR135W HSC82P15108 705 aaKnown RBP1.86□□□□□ -2.11
CTF4YPR135W DBF20P32328 564 aa1.86□□□□□ -2.11
CTF4YPR135W RME1P32338 300 aaKnown RBP1.86□□□□□ -2.11
CTF4YPR135W AFR1P33304 620 aa1.86□□□□□ -2.11
CTF4YPR135W DSS1P39112 969 aa1.86□□□□□ -2.11
CTF4YPR135W GPP2P40106 250 aaKnown RBP1.86□□□□□ -2.11
CTF4YPR135W ERR3P42222 437 aa1.86□□□□□ -2.11
CTF4YPR135W YJR096WP47137 282 aa1.86□□□□□ -2.11
CTF4YPR135W NPY1P53164 384 aa1.86□□□□□ -2.11
CTF4YPR135W DAM1P53267 343 aa1.86□□□□□ -2.11
CTF4YPR135W YHM2Q04013 314 aa1.86□□□□□ -2.11
CTF4YPR135W MRI1Q06489 411 aaKnown RBP1.86□□□□□ -2.11
CTF4YPR135W TY1B-AO13527 1196 aaKnown RBP1.86□□□□□ -2.11
CTF4YPR135W MSS18P08593 268 aa1.86□□□□□ -2.11
CTF4YPR135W CHS3P29465 1165 aa1.86□□□□□ -2.11
CTF4YPR135W TRZ1P36159 838 aaPredicted RBP1.86□□□□□ -2.11
CTF4YPR135W UME6P39001 836 aa1.86□□□□□ -2.11
CTF4YPR135W CEP3P40969 608 aa1.86□□□□□ -2.11
CTF4YPR135W IES1P43579 692 aa1.86□□□□□ -2.11
CTF4YPR135W UBP6P43593 499 aaKnown RBP1.86□□□□□ -2.11
CTF4YPR135W NIT2P47016 307 aa1.86□□□□□ -2.11
CTF4YPR135W CIA1Q05583 330 aa1.86□□□□□ -2.11
CTF4YPR135W TRE2Q08693 809 aa1.86□□□□□ -2.11
CTF4YPR135W YOR389WQ08912 624 aa1.86□□□□□ -2.11
CTF4YPR135W YPL278CQ08990 100 aa1.86□□□□□ -2.11
CTF4YPR135W PDH1Q12428 516 aaKnown RBP1.86□□□□□ -2.11
CTF4YPR135W HRP1Q99383 534 aaKnown RBP1.86□□□□□ -2.11
CTF4YPR135W SPO11P23179 398 aa1.85□□□□□ -2.11
CTF4YPR135W MCM10P32354 571 aa1.85□□□□□ -2.11
CTF4YPR135W GCS1P35197 352 aa1.85□□□□□ -2.11
CTF4YPR135W YBR238CP38330 731 aaKnown RBP1.85□□□□□ -2.11
CTF4YPR135W YHR078WP38799 552 aa1.85□□□□□ -2.11
CTF4YPR135W ESL1P40456 1118 aa1.85□□□□□ -2.11
CTF4YPR135W VHR1P40522 640 aa1.85□□□□□ -2.11
CTF4YPR135W BFA1P47113 574 aa1.85□□□□□ -2.11
CTF4YPR135W PUS2P53167 370 aa1.85□□□□□ -2.11
CTF4YPR135W CWC22P53333 577 aaKnown RBP1.85□□□□□ -2.11
CTF4YPR135W PTA1Q01329 785 aaPredicted RBP1.85□□□□□ -2.11
CTF4YPR135W YDR514CQ04408 483 aa1.85□□□□□ -2.11
CTF4YPR135W YDR056CQ12025 205 aa1.85□□□□□ -2.11
CTF4YPR135W RRP6Q12149 733 aaKnown RBP1.85□□□□□ -2.11
CTF4YPR135W GPR1Q12361 961 aa1.85□□□□□ -2.11
CTF4YPR135W VPS5Q92331 675 aa1.85□□□□□ -2.11
CTF4YPR135W CET1O13297 549 aaPredicted RBP1.85□□□□□ -2.11
CTF4YPR135W SFL1P20134 766 aa1.85□□□□□ -2.11
CTF4YPR135W PTP2P29461 750 aa1.85□□□□□ -2.11
CTF4YPR135W SSH4P32343 579 aa1.85□□□□□ -2.11
CTF4YPR135W TYE7P33122 291 aaPredicted RBP1.85□□□□□ -2.11
CTF4YPR135W BUD2P33314 1104 aa1.85□□□□□ -2.11
CTF4YPR135W REC104P33323 182 aa1.85□□□□□ -2.11
CTF4YPR135W HIS7P33734 552 aaKnown RBP1.85□□□□□ -2.11
CTF4YPR135W NIC96P34077 839 aa1.85□□□□□ -2.11
CTF4YPR135W SAP190P36123 1033 aa1.85□□□□□ -2.11
CTF4YPR135W PET10P36139 283 aa1.85□□□□□ -2.11
Retrieved 100 of 5,963 RNA–protein pairs in 32.1 ms