RNA–Protein interactions for RNA: YPL085W

SEC16, Transcript of COPII vesicle coat protein required for ER transport vesicle budding, yeastyeast

Gene SEC16, Length 6,588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC16YPL085W LGE1Q02796 332 aaKnown RBP2.27□□□□□ -2.05
SEC16YPL085W SLD5Q03406 294 aa2.27□□□□□ -2.05
SEC16YPL085W YMR027WQ04371 470 aa2.27□□□□□ -2.05
SEC16YPL085W YPR084WQ06821 456 aa2.27□□□□□ -2.05
SEC16YPL085W ESC8Q08119 714 aa2.27□□□□□ -2.05
SEC16YPL085W MSC6Q08818 692 aaKnown RBP2.27□□□□□ -2.05
SEC16YPL085W RUP1Q12242 671 aa2.27□□□□□ -2.05
SEC16YPL085W MET6P05694 767 aaKnown RBP2.26□□□□□ -2.05
SEC16YPL085W FRE2P36033 711 aa2.26□□□□□ -2.05
SEC16YPL085W ACA1P39970 489 aa2.26□□□□□ -2.05
SEC16YPL085W TGL3P40308 642 aa2.26□□□□□ -2.05
SEC16YPL085W ALA1P40825 983 aaKnown RBP2.26□□□□□ -2.05
SEC16YPL085W STB1P42845 420 aa2.26□□□□□ -2.05
SEC16YPL085W INP52P50942 1183 aa2.26□□□□□ -2.05
SEC16YPL085W VAC7P53950 1165 aa2.26□□□□□ -2.05
SEC16YPL085W ADE12P80210 433 aaKnown RBP2.26□□□□□ -2.05
SEC16YPL085W SKI8Q02793 397 aaPredicted RBP2.26□□□□□ -2.05
SEC16YPL085W USA1Q03714 838 aa2.26□□□□□ -2.05
SEC16YPL085W BSP1Q06604 576 aa2.26□□□□□ -2.05
SEC16YPL085W YPL216WQ08964 1102 aa2.26□□□□□ -2.05
SEC16YPL085W SNF2P22082 1703 aa2.26□□□□□ -2.05
SEC16YPL085W MPH2P0CD99 609 aa2.26□□□□□ -2.05
SEC16YPL085W GUK1P15454 187 aaKnown RBP2.26□□□□□ -2.05
SEC16YPL085W AFG1P32317 509 aa2.26□□□□□ -2.05
SEC16YPL085W ZUO1P32527 433 aaKnown RBP2.26□□□□□ -2.05
SEC16YPL085W SIC1P38634 284 aa2.26□□□□□ -2.05
SEC16YPL085W MGS1P40151 587 aa2.26□□□□□ -2.05
SEC16YPL085W YJL070CP40361 888 aa2.26□□□□□ -2.05
SEC16YPL085W YIR042CP40586 236 aa2.26□□□□□ -2.05
SEC16YPL085W SHE4P51534 789 aa2.26□□□□□ -2.05
SEC16YPL085W YGR067CP53243 804 aa2.26□□□□□ -2.05
SEC16YPL085W COG2P53271 262 aa2.26□□□□□ -2.05
SEC16YPL085W COG6P53959 839 aa2.26□□□□□ -2.05
SEC16YPL085W YPL107WQ02873 248 aa2.26□□□□□ -2.05
SEC16YPL085W GYL1Q04322 720 aa2.26□□□□□ -2.05
SEC16YPL085W HDA3Q06623 655 aa2.26□□□□□ -2.05
SEC16YPL085W PUS9Q12069 462 aa2.26□□□□□ -2.05
SEC16YPL085W NCA2Q12374 616 aa2.26□□□□□ -2.05
SEC16YPL085W AVL9Q12500 764 aa2.26□□□□□ -2.05
SEC16YPL085W HEM2P05373 342 aa2.26□□□□□ -2.05
SEC16YPL085W ILS1P09436 1072 aaKnown RBP2.26□□□□□ -2.05
SEC16YPL085W SIN4P32259 974 aa2.26□□□□□ -2.05
SEC16YPL085W MDJ1P35191 511 aa2.26□□□□□ -2.05
SEC16YPL085W CCL1P37366 393 aa2.26□□□□□ -2.05
SEC16YPL085W ARB1P40024 610 aaKnown RBP2.26□□□□□ -2.05
SEC16YPL085W LAM5P43560 674 aa2.26□□□□□ -2.05
SEC16YPL085W TAF6P53040 516 aa2.26□□□□□ -2.05
SEC16YPL085W FLC3P53121 802 aa2.26□□□□□ -2.05
SEC16YPL085W RCR2Q03446 210 aaKnown RBP2.26□□□□□ -2.05
SEC16YPL085W TDA9Q04545 1251 aa2.26□□□□□ -2.05
SEC16YPL085W GLO4Q12320 285 aa2.26□□□□□ -2.05
SEC16YPL085W CDC34P14682 295 aa2.26□□□□□ -2.05
SEC16YPL085W DMC1P25453 334 aa2.26□□□□□ -2.05
SEC16YPL085W BCK2P33306 851 aa2.26□□□□□ -2.05
SEC16YPL085W CSG2P35206 410 aa2.26□□□□□ -2.05
SEC16YPL085W PGM2P37012 569 aaKnown RBP2.26□□□□□ -2.05
SEC16YPL085W STB5P38699 743 aa2.26□□□□□ -2.05
SEC16YPL085W HAT2P39984 401 aa2.26□□□□□ -2.05
SEC16YPL085W GID8P40208 455 aa2.26□□□□□ -2.05
SEC16YPL085W SEC9P40357 651 aa2.26□□□□□ -2.05
SEC16YPL085W OYE3P41816 400 aaPredicted RBP2.26□□□□□ -2.05
SEC16YPL085W BNA6P43619 295 aa2.26□□□□□ -2.05
SEC16YPL085W PUS4P48567 403 aaKnown RBP2.26□□□□□ -2.05
SEC16YPL085W CDC55Q00362 526 aa2.26□□□□□ -2.05
SEC16YPL085W UTP13Q05946 817 aaKnown RBP2.26□□□□□ -2.05
SEC16YPL085W RRP9Q06506 573 aaKnown RBP2.26□□□□□ -2.05
SEC16YPL085W HIS1P00498 297 aaKnown RBP2.26□□□□□ -2.05
SEC16YPL085W GCR1P07261 785 aa2.26□□□□□ -2.05
SEC16YPL085W SEC12P11655 471 aa2.26□□□□□ -2.05
SEC16YPL085W PUF4P25339 888 aaKnown RBP RIP-Chip data2.26□□□□□ -2.05 RIP-Chip
SEC16YPL085W TFC1P32367 649 aa2.26□□□□□ -2.05
SEC16YPL085W YBR241CP38142 488 aa2.26□□□□□ -2.05
SEC16YPL085W SRP68P38687 599 aaKnown RBP2.26□□□□□ -2.05
SEC16YPL085W FET5P43561 622 aa2.26□□□□□ -2.05
SEC16YPL085W YML6P51998 286 aa2.26□□□□□ -2.05
SEC16YPL085W CAF120P53836 1060 aa2.26□□□□□ -2.05
SEC16YPL085W INA17Q02888 182 aa2.26□□□□□ -2.05
SEC16YPL085W COQ9Q05779 260 aa2.26□□□□□ -2.05
SEC16YPL085W SMD2Q06217 110 aaKnown RBP2.26□□□□□ -2.05
SEC16YPL085W MDM20Q12387 796 aaKnown RBP2.26□□□□□ -2.05
SEC16YPL085W GCY1P14065 312 aaKnown RBP RIP-Chip data2.26□□□□□ -2.05not detected
SEC16YPL085W SEC63P14906 663 aa2.26□□□□□ -2.05
SEC16YPL085W PCH2P38126 564 aa2.26□□□□□ -2.05
SEC16YPL085W SLX1P38324 304 aa2.26□□□□□ -2.05
SEC16YPL085W UBA4P38820 440 aa2.26□□□□□ -2.05
SEC16YPL085W VHR2P40041 505 aa2.26□□□□□ -2.05
SEC16YPL085W IME4P41833 600 aa2.26□□□□□ -2.05
SEC16YPL085W OSW7P43611 510 aa2.26□□□□□ -2.05
SEC16YPL085W RPS10BP46784 105 aaKnown RBP2.26□□□□□ -2.05
SEC16YPL085W RRN5Q02983 363 aa2.26□□□□□ -2.05
SEC16YPL085W SSY1Q03770 852 aa2.26□□□□□ -2.05
SEC16YPL085W YOL024WQ08172 172 aa2.26□□□□□ -2.05
SEC16YPL085W RRT8Q08219 342 aa2.26□□□□□ -2.05
SEC16YPL085W RPS10AQ08745 105 aaPredicted RBP2.26□□□□□ -2.05
SEC16YPL085W LAP2Q10740 671 aa2.26□□□□□ -2.05
SEC16YPL085W YLL056CQ12177 298 aa2.26□□□□□ -2.05
SEC16YPL085W RRP42Q12277 265 aaPredicted RBP2.26□□□□□ -2.05
SEC16YPL085W ILV1P00927 576 aaKnown RBP2.25□□□□□ -2.05
SEC16YPL085W EST1P17214 699 aaPredicted RBP2.25□□□□□ -2.05
SEC16YPL085W TPS2P31688 896 aaKnown RBP2.25□□□□□ -2.05
Retrieved 100 of 5,963 RNA–protein pairs in 78.3 ms