RNA–Protein interactions for RNA: YPL008W

CHL1, Transcript of Probable DNA helicase, yeast

Gene CHL1, Length 2,586 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CHL1	YPL008W	TMT1	P32643	299 aa		4.16	□□□□□ -1.74
CHL1	YPL008W	SMY2	P32909	740 aa	Known RBP	4.16	□□□□□ -1.74
CHL1	YPL008W	YBR284W	P38150	797 aa		4.16	□□□□□ -1.74
CHL1	YPL008W	VID24	P38263	362 aa		4.16	□□□□□ -1.74
CHL1	YPL008W	RIX1	P38883	763 aa	Predicted RBP	4.16	□□□□□ -1.74
CHL1	YPL008W	SNZ3	P43545	298 aa		4.16	□□□□□ -1.74
CHL1	YPL008W	NMD5	P46970	1048 aa		4.16	□□□□□ -1.74
CHL1	YPL008W	SNZ2	P53824	298 aa		4.16	□□□□□ -1.74
CHL1	YPL008W	PEX13	P80667	386 aa		4.16	□□□□□ -1.74
CHL1	YPL008W	MET14	Q02196	202 aa		4.16	□□□□□ -1.74
CHL1	YPL008W	MEH1	Q02205	184 aa		4.16	□□□□□ -1.74
CHL1	YPL008W	FAR8	Q05040	523 aa		4.16	□□□□□ -1.74
CHL1	YPL008W	KAP95	Q06142	861 aa	Known RBP	4.16	□□□□□ -1.74
CHL1	YPL008W	ABP140	Q08641	628 aa	Known RBP	4.16	□□□□□ -1.74
CHL1	YPL008W	FAP7	Q12055	197 aa	Predicted RBP	4.16	□□□□□ -1.74
CHL1	YPL008W	GLO4	Q12320	285 aa		4.16	□□□□□ -1.74
CHL1	YPL008W	GAL10	P04397	699 aa		4.16	□□□□□ -1.74
CHL1	YPL008W	WHI2	P12611	486 aa		4.16	□□□□□ -1.74
CHL1	YPL008W	PRP16	P15938	1071 aa	Predicted RBP	4.16	□□□□□ -1.74
CHL1	YPL008W	KAR3	P17119	729 aa		4.16	□□□□□ -1.74
CHL1	YPL008W	RAD5	P32849	1169 aa	Predicted RBP	4.16	□□□□□ -1.74
CHL1	YPL008W	BAP2	P38084	609 aa		4.16	□□□□□ -1.74
CHL1	YPL008W	SWC5	P38326	303 aa		4.16	□□□□□ -1.74
CHL1	YPL008W	YGL176C	P46945	554 aa		4.16	□□□□□ -1.74
CHL1	YPL008W	SAE2	P46946	345 aa		4.16	□□□□□ -1.74
CHL1	YPL008W	YJR054W	P47114	497 aa		4.16	□□□□□ -1.74
CHL1	YPL008W	MND1	P53102	219 aa		4.16	□□□□□ -1.74
CHL1	YPL008W	MNP1	P53163	194 aa	Predicted RBP	4.16	□□□□□ -1.74
CHL1	YPL008W	YNL058C	P53947	316 aa		4.16	□□□□□ -1.74
CHL1	YPL008W	CEF1	Q03654	590 aa	Predicted RBP	4.16	□□□□□ -1.74
CHL1	YPL008W	USA1	Q03714	838 aa		4.16	□□□□□ -1.74
CHL1	YPL008W	SPC24	Q04477	213 aa		4.16	□□□□□ -1.74
CHL1	YPL008W	BI2	P03873	423 aa		4.15	□□□□□ -1.74
CHL1	YPL008W	BI4	P03879	638 aa		4.15	□□□□□ -1.74
CHL1	YPL008W	ILV2	P07342	687 aa	Known RBP	4.15	□□□□□ -1.74
CHL1	YPL008W	CBF2	P32504	956 aa		4.15	□□□□□ -1.74
CHL1	YPL008W	MRX1	P40050	688 aa		4.15	□□□□□ -1.74
CHL1	YPL008W	TMN3	P40071	706 aa		4.15	□□□□□ -1.74
CHL1	YPL008W	UBP6	P43593	499 aa	Known RBP	4.15	□□□□□ -1.74
CHL1	YPL008W	SPC105	P53148	917 aa		4.15	□□□□□ -1.74
CHL1	YPL008W	NOG2	P53742	486 aa	Known RBP	4.15	□□□□□ -1.74
CHL1	YPL008W	YMR321C	Q04898	105 aa		4.15	□□□□□ -1.74
CHL1	YPL008W	DUS4	Q06063	367 aa		4.15	□□□□□ -1.74
CHL1	YPL008W	GIC2	Q06648	383 aa		4.15	□□□□□ -1.74
CHL1	YPL008W	SHS1	Q07657	551 aa		4.15	□□□□□ -1.74
CHL1	YPL008W	CMS1	Q07897	291 aa	Known RBP	4.15	□□□□□ -1.74
CHL1	YPL008W	AIR2	Q12476	344 aa	Known RBP	4.15	□□□□□ -1.74
CHL1	YPL008W	TMA7	Q3E764	64 aa	Known RBP	4.15	□□□□□ -1.74
CHL1	YPL008W	BI3	Q9ZZW7	517 aa		4.15	□□□□□ -1.74
CHL1	YPL008W	AEP2	P22136	580 aa		4.15	□□□□□ -1.75
CHL1	YPL008W	PAT1	P25644	796 aa	Known RBP	4.15	□□□□□ -1.75
CHL1	YPL008W	SEC1	P30619	724 aa	Known RBP	4.15	□□□□□ -1.75
CHL1	YPL008W	HEK2	P38199	381 aa	Known RBP RIP-Chip data	4.15	□□□□□ -1.75	not detected
CHL1	YPL008W	MSR1	P38714	643 aa		4.15	□□□□□ -1.75
CHL1	YPL008W	NEM1	P38757	446 aa		4.15	□□□□□ -1.75
CHL1	YPL008W	SPC97	P38863	823 aa		4.15	□□□□□ -1.75
CHL1	YPL008W	FIR1	P40020	876 aa		4.15	□□□□□ -1.75
CHL1	YPL008W	GPP2	P40106	250 aa	Known RBP	4.15	□□□□□ -1.75
CHL1	YPL008W	PMT3	P47190	753 aa		4.15	□□□□□ -1.75
CHL1	YPL008W	RPS7B	P48164	190 aa	Known RBP	4.15	□□□□□ -1.75
CHL1	YPL008W	YGL036W	P53185	909 aa	Predicted RBP	4.15	□□□□□ -1.75
CHL1	YPL008W	UBX4	P54730	416 aa		4.15	□□□□□ -1.75
CHL1	YPL008W	AIM39	Q08223	395 aa		4.15	□□□□□ -1.75
CHL1	YPL008W	SDH5	Q08230	162 aa		4.15	□□□□□ -1.75
CHL1	YPL008W	YPL225W	Q08971	146 aa	Known RBP	4.15	□□□□□ -1.75
CHL1	YPL008W	YDR018C	Q12185	396 aa		4.15	□□□□□ -1.75
CHL1	YPL008W	MSS18	P08593	268 aa		4.14	□□□□□ -1.75
CHL1	YPL008W	PMR1	P13586	950 aa		4.14	□□□□□ -1.75
CHL1	YPL008W	POX1	P13711	748 aa		4.14	□□□□□ -1.75
CHL1	YPL008W	IDI1	P15496	288 aa		4.14	□□□□□ -1.75
CHL1	YPL008W	HEM15	P16622	393 aa		4.14	□□□□□ -1.75
CHL1	YPL008W	SLY1	P22213	666 aa		4.14	□□□□□ -1.75
CHL1	YPL008W	TRX1	P22217	103 aa	Known RBP	4.14	□□□□□ -1.75
CHL1	YPL008W	RRT12	P25381	491 aa		4.14	□□□□□ -1.75
CHL1	YPL008W	MSS51	P32335	436 aa		4.14	□□□□□ -1.75
CHL1	YPL008W	EFB1	P32471	206 aa	Known RBP	4.14	□□□□□ -1.75
CHL1	YPL008W	MRP4	P32902	394 aa		4.14	□□□□□ -1.75
CHL1	YPL008W	YAP1801	P38856	637 aa		4.14	□□□□□ -1.75
CHL1	YPL008W	TDA10	P42938	290 aa		4.14	□□□□□ -1.75
CHL1	YPL008W	GYP8	P43570	497 aa		4.14	□□□□□ -1.75
CHL1	YPL008W	NIT2	P47016	307 aa		4.14	□□□□□ -1.75
CHL1	YPL008W	ILM1	P47155	203 aa		4.14	□□□□□ -1.75
CHL1	YPL008W	ALT1	P52893	592 aa		4.14	□□□□□ -1.75
CHL1	YPL008W	TAF6	P53040	516 aa		4.14	□□□□□ -1.75
CHL1	YPL008W	YNR065C	P53751	1116 aa		4.14	□□□□□ -1.75
CHL1	YPL008W	GPD1	Q00055	391 aa	Known RBP	4.14	□□□□□ -1.75
CHL1	YPL008W	SLT2	Q00772	484 aa		4.14	□□□□□ -1.75
CHL1	YPL008W	NBA1	Q08229	501 aa	Known RBP	4.14	□□□□□ -1.75
CHL1	YPL008W	VPS5	Q92331	675 aa		4.14	□□□□□ -1.75
CHL1	YPL008W	IME1	P21190	360 aa		4.14	□□□□□ -1.75
CHL1	YPL008W	YKL151C	P36059	337 aa		4.14	□□□□□ -1.75
CHL1	YPL008W	APE3	P37302	537 aa	Known RBP	4.14	□□□□□ -1.75
CHL1	YPL008W	KTR4	P38131	464 aa		4.14	□□□□□ -1.75
CHL1	YPL008W	MSC7	P38694	644 aa		4.14	□□□□□ -1.75
CHL1	YPL008W	PNT1	P38969	423 aa		4.14	□□□□□ -1.75
CHL1	YPL008W	LYS9	P38999	446 aa		4.14	□□□□□ -1.75
CHL1	YPL008W	MND2	P40577	368 aa		4.14	□□□□□ -1.75
CHL1	YPL008W	RSM26	P47141	266 aa		4.14	□□□□□ -1.75
CHL1	YPL008W	MZM1	Q03429	123 aa	Predicted RBP	4.14	□□□□□ -1.75
CHL1	YPL008W	YLR455W	Q06188	304 aa		4.14	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 18.9 ms