RNA–Protein interactions for RNA: YNR023W

SNF12, Transcript of 73 kDa subunit of the SWI/SNF chromatin remodeling complex, yeastyeast

Gene SNF12, Length 1,701 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNF12YNR023W COQ6P53318 479 aa2.97□□□□□ -1.93
SNF12YNR023W ESF2P53743 316 aaKnown RBP2.97□□□□□ -1.93
SNF12YNR023W GTR1Q00582 310 aa2.97□□□□□ -1.93
SNF12YNR023W TPK2P06245 380 aa2.96□□□□□ -1.93
SNF12YNR023W PET122P10355 254 aa2.96□□□□□ -1.93
SNF12YNR023W SWI4P25302 1093 aaKnown RBP2.96□□□□□ -1.93
SNF12YNR023W ARP2P32381 391 aaKnown RBP2.96□□□□□ -1.93
SNF12YNR023W BEM3P32873 1128 aa2.96□□□□□ -1.93
SNF12YNR023W YBR138CP38277 524 aa2.96□□□□□ -1.93
SNF12YNR023W RIX1P38883 763 aaPredicted RBP2.96□□□□□ -1.93
SNF12YNR023W NAB3P38996 802 aaKnown RBP RIP-Chip data2.96□□□□□ -1.93not detected
SNF12YNR023W MIT1P40002 666 aa2.96□□□□□ -1.93
SNF12YNR023W ARB1P40024 610 aaKnown RBP2.96□□□□□ -1.93
SNF12YNR023W MAM1P40065 302 aa2.96□□□□□ -1.93
SNF12YNR023W KAP123P40069 1113 aaKnown RBP2.96□□□□□ -1.93
SNF12YNR023W LAS21P40367 830 aa2.96□□□□□ -1.93
SNF12YNR023W SKP2P42843 763 aa2.96□□□□□ -1.93
SNF12YNR023W SAP4P53036 818 aa2.96□□□□□ -1.93
SNF12YNR023W VPS73P53142 486 aaKnown RBP2.96□□□□□ -1.93
SNF12YNR023W CPR8P53728 308 aa2.96□□□□□ -1.93
SNF12YNR023W CSR1Q06705 408 aaKnown RBP2.96□□□□□ -1.93
SNF12YNR023W ICL2Q12031 575 aa2.96□□□□□ -1.93
SNF12YNR023W NKP1Q12493 238 aa2.96□□□□□ -1.93
SNF12YNR023W CPA2P03965 1118 aaKnown RBP2.96□□□□□ -1.94
SNF12YNR023W YPK1P12688 680 aaKnown RBP2.96□□□□□ -1.94
SNF12YNR023W KGD2P19262 463 aaPredicted RBP2.96□□□□□ -1.94
SNF12YNR023W PDE1P22434 369 aa2.96□□□□□ -1.94
SNF12YNR023W RAD16P31244 790 aa2.96□□□□□ -1.94
SNF12YNR023W GCD7P32502 381 aaPredicted RBP2.96□□□□□ -1.94
SNF12YNR023W RPT3P33298 428 aaKnown RBP2.96□□□□□ -1.94
SNF12YNR023W YPT10P38146 199 aa2.96□□□□□ -1.94
SNF12YNR023W UME6P39001 836 aa2.96□□□□□ -1.94
SNF12YNR023W YGL117WP53133 265 aa2.96□□□□□ -1.94
SNF12YNR023W CRF1Q04930 467 aa2.96□□□□□ -1.94
SNF12YNR023W OPY2Q06810 360 aa2.96□□□□□ -1.94
SNF12YNR023W YDL121CQ07541 149 aa2.96□□□□□ -1.94
SNF12YNR023W MSL5Q12186 476 aaKnown RBP RIP-Chip data2.96□□□□□ -1.94not detected
SNF12YNR023W YBR255C-AQ3E776 120 aa2.96□□□□□ -1.94
SNF12YNR023W YER175W-AQ8TGU4 54 aa2.96□□□□□ -1.94
SNF12YNR023W PFK2P16862 959 aaKnown RBP RIP-Chip data2.95□□□□□ -1.94not detected
SNF12YNR023W RNR3P21672 869 aaKnown RBP2.95□□□□□ -1.94
SNF12YNR023W RER1P25560 188 aa2.95□□□□□ -1.94
SNF12YNR023W ILV6P25605 309 aaKnown RBP2.95□□□□□ -1.94
SNF12YNR023W NUP120P35729 1037 aa2.95□□□□□ -1.94
SNF12YNR023W RRN3P36070 627 aa2.95□□□□□ -1.94
SNF12YNR023W YEL020CP39994 560 aa2.95□□□□□ -1.94
SNF12YNR023W YIL166CP40445 542 aa2.95□□□□□ -1.94
SNF12YNR023W OPT1P40897 799 aa2.95□□□□□ -1.94
SNF12YNR023W CTF18P49956 741 aa2.95□□□□□ -1.94
SNF12YNR023W VPS72Q03388 795 aa2.95□□□□□ -1.94
SNF12YNR023W BUD21Q08492 214 aaPredicted RBP2.95□□□□□ -1.94
SNF12YNR023W SSP2Q08646 371 aa2.95□□□□□ -1.94
SNF12YNR023W SUL2Q12325 893 aa2.95□□□□□ -1.94
SNF12YNR023W YMR084WA2P2R3 262 aa2.94□□□□□ -1.94
SNF12YNR023W LEU2P04173 364 aaPredicted RBP2.94□□□□□ -1.94
SNF12YNR023W MRPL9P31334 269 aa2.94□□□□□ -1.94
SNF12YNR023W UGP1P32861 499 aaKnown RBP2.94□□□□□ -1.94
SNF12YNR023W SWE1P32944 819 aa2.94□□□□□ -1.94
SNF12YNR023W TDP1P38319 544 aa2.94□□□□□ -1.94
SNF12YNR023W ASN1P49089 572 aaKnown RBP2.94□□□□□ -1.94
SNF12YNR023W MRK1P50873 501 aa2.94□□□□□ -1.94
SNF12YNR023W APM1Q00776 475 aaPredicted RBP2.94□□□□□ -1.94
SNF12YNR023W MTG1Q03151 367 aaPredicted RBP2.94□□□□□ -1.94
SNF12YNR023W TFC6Q06339 672 aa2.94□□□□□ -1.94
SNF12YNR023W CHO2P05374 869 aaKnown RBP2.93□□□□□ -1.94
SNF12YNR023W STE12P13574 688 aa2.93□□□□□ -1.94
SNF12YNR023W PMA2P19657 947 aa2.93□□□□□ -1.94
SNF12YNR023W SPO11P23179 398 aa2.93□□□□□ -1.94
SNF12YNR023W SAT4P25333 603 aaKnown RBP2.93□□□□□ -1.94
SNF12YNR023W EMP70P32802 667 aa2.93□□□□□ -1.94
SNF12YNR023W SLC1P33333 303 aa2.93□□□□□ -1.94
SNF12YNR023W TEF4P36008 412 aaKnown RBP2.93□□□□□ -1.94
SNF12YNR023W IFA38P38286 347 aa2.93□□□□□ -1.94
SNF12YNR023W ZAP1P47043 880 aa2.93□□□□□ -1.94
SNF12YNR023W YMR018WQ04364 514 aa2.93□□□□□ -1.94
SNF12YNR023W GTB1Q04924 702 aa2.93□□□□□ -1.94
SNF12YNR023W VID22Q05934 901 aa2.93□□□□□ -1.94
SNF12YNR023W THI7Q05998 598 aa2.93□□□□□ -1.94
SNF12YNR023W ATG23Q06671 453 aa2.93□□□□□ -1.94
SNF12YNR023W VAM6Q07468 1049 aa2.93□□□□□ -1.94
SNF12YNR023W NEW1Q08972 1196 aaKnown RBP2.93□□□□□ -1.94
SNF12YNR023W RPL7AP05737 244 aaKnown RBP2.93□□□□□ -1.94
SNF12YNR023W TPK1P06244 397 aa2.93□□□□□ -1.94
SNF12YNR023W SNF1P06782 633 aaKnown RBP2.93□□□□□ -1.94
SNF12YNR023W SPO16P17122 198 aa2.93□□□□□ -1.94
SNF12YNR023W RPA135P22138 1203 aaKnown RBP2.93□□□□□ -1.94
SNF12YNR023W RPF2P36160 344 aaKnown RBP2.93□□□□□ -1.94
SNF12YNR023W ARO9P38840 513 aaPredicted RBP2.93□□□□□ -1.94
SNF12YNR023W MTG2P38860 518 aa2.93□□□□□ -1.94
SNF12YNR023W PAC2P39937 518 aa2.93□□□□□ -1.94
SNF12YNR023W VID27P40157 782 aa2.93□□□□□ -1.94
SNF12YNR023W COG2P53271 262 aa2.93□□□□□ -1.94
SNF12YNR023W CSL4P53859 292 aaPredicted RBP2.93□□□□□ -1.94
SNF12YNR023W YNL092WP53934 400 aa2.93□□□□□ -1.94
SNF12YNR023W YNL058CP53947 316 aa2.93□□□□□ -1.94
SNF12YNR023W SVL3Q03088 825 aaKnown RBP2.93□□□□□ -1.94
SNF12YNR023W WAR1Q03631 944 aa2.93□□□□□ -1.94
SNF12YNR023W YDL242WQ07746 117 aa2.93□□□□□ -1.94
SNF12YNR023W MRN1Q08925 612 aaKnown RBP RIP-Chip data2.93□□□□□ -1.94not detected
SNF12YNR023W RPL7BQ12213 244 aaKnown RBP2.93□□□□□ -1.94
Retrieved 100 of 5,963 RNA–protein pairs in 19.4 ms