RNA–Protein interactions for RNA: YNL197C

WHI3, Transcript of RNA binding protein that sequesters CLN3 mRNA in cytoplasmic foci, yeastyeast

Gene WHI3, Length 1,986 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
WHI3YNL197C DAK1P54838 584 aaKnown RBP3.84□□□□□ -1.79
WHI3YNL197C TY2A-DR2Q03483 438 aa3.84□□□□□ -1.79
WHI3YNL197C UFO1Q04511 668 aa3.84□□□□□ -1.79
WHI3YNL197C MRN1Q08925 612 aaKnown RBP RIP-Chip data3.84□□□□□ -1.79 RIP-Chip
WHI3YNL197C TY2A-BQ12260 438 aa3.84□□□□□ -1.79
WHI3YNL197C TY2A-OR2Q12293 438 aa3.84□□□□□ -1.79
WHI3YNL197C TY2A-DR1Q12392 438 aa3.84□□□□□ -1.79
WHI3YNL197C TY2A-OR1Q12439 438 aa3.84□□□□□ -1.79
WHI3YNL197C TY2A-DR3Q99303 438 aa3.84□□□□□ -1.79
WHI3YNL197C ABF1P14164 731 aa3.83□□□□□ -1.8
WHI3YNL197C MET8P15807 274 aa3.83□□□□□ -1.8
WHI3YNL197C URK1P27515 501 aa3.83□□□□□ -1.8
WHI3YNL197C CDC5P32562 705 aa3.83□□□□□ -1.8
WHI3YNL197C TEF4P36008 412 aaKnown RBP3.83□□□□□ -1.8
WHI3YNL197C FAF1P40546 346 aaPredicted RBP3.83□□□□□ -1.8
WHI3YNL197C YIP4P53093 235 aa3.83□□□□□ -1.8
WHI3YNL197C PRS5Q12265 496 aaKnown RBP3.83□□□□□ -1.8
WHI3YNL197C SEM1O94742 89 aa3.83□□□□□ -1.8
WHI3YNL197C TPK1P06244 397 aa3.83□□□□□ -1.8
WHI3YNL197C CNE1P27825 502 aa3.83□□□□□ -1.8
WHI3YNL197C UME6P39001 836 aa3.83□□□□□ -1.8
WHI3YNL197C UBP5P39944 805 aa3.83□□□□□ -1.8
WHI3YNL197C ZAP1P47043 880 aa3.83□□□□□ -1.8
WHI3YNL197C YNR061CP53747 219 aa3.83□□□□□ -1.8
WHI3YNL197C MUK1Q02866 612 aa3.83□□□□□ -1.8
WHI3YNL197C YPL108WQ02872 168 aaPredicted RBP3.83□□□□□ -1.8
WHI3YNL197C BMS1Q08965 1183 aaKnown RBP3.83□□□□□ -1.8
WHI3YNL197C RVB2Q12464 471 aaKnown RBP3.83□□□□□ -1.8
WHI3YNL197C PNO1Q99216 274 aaKnown RBP3.83□□□□□ -1.8
WHI3YNL197C Q0010Q9ZZX9 128 aa3.83□□□□□ -1.8
WHI3YNL197C LAM4P38800 1345 aa3.83□□□□□ -1.8
WHI3YNL197C RPL19AP0CX82 189 aaKnown RBP3.82□□□□□ -1.8
WHI3YNL197C RPL19BP0CX83 189 aaPredicted RBP3.82□□□□□ -1.8
WHI3YNL197C RAD16P31244 790 aa3.82□□□□□ -1.8
WHI3YNL197C MRP20P32387 263 aa3.82□□□□□ -1.8
WHI3YNL197C APL3P38065 1025 aa3.82□□□□□ -1.8
WHI3YNL197C CCT7P42943 550 aaKnown RBP3.82□□□□□ -1.8
WHI3YNL197C IMO32P53219 342 aa3.82□□□□□ -1.8
WHI3YNL197C SSL2Q00578 843 aa3.82□□□□□ -1.8
WHI3YNL197C ESC8Q08119 714 aa3.82□□□□□ -1.8
WHI3YNL197C VCX1Q99385 411 aa3.82□□□□□ -1.8
WHI3YNL197C CDC31P06704 161 aaKnown RBP3.82□□□□□ -1.8
WHI3YNL197C AMD2P22580 549 aa3.82□□□□□ -1.8
WHI3YNL197C CNS1P33313 385 aa3.82□□□□□ -1.8
WHI3YNL197C ESL2P36168 1195 aa3.82□□□□□ -1.8
WHI3YNL197C CCL1P37366 393 aa3.82□□□□□ -1.8
WHI3YNL197C YHL017WP38745 532 aa3.82□□□□□ -1.8
WHI3YNL197C PCL5P38794 229 aa3.82□□□□□ -1.8
WHI3YNL197C MIT1P40002 666 aa3.82□□□□□ -1.8
WHI3YNL197C NDC80P40460 691 aa3.82□□□□□ -1.8
WHI3YNL197C MFM1Q02783 413 aa3.82□□□□□ -1.8
WHI3YNL197C ATP2P00830 511 aaKnown RBP3.81□□□□□ -1.8
WHI3YNL197C TRM2P33753 639 aa3.81□□□□□ -1.8
WHI3YNL197C CHS7P38843 316 aa3.81□□□□□ -1.8
WHI3YNL197C IST3P40565 148 aaPredicted RBP3.81□□□□□ -1.8
WHI3YNL197C PMT6P42934 759 aa3.81□□□□□ -1.8
WHI3YNL197C SUN4P53616 420 aa3.81□□□□□ -1.8
WHI3YNL197C YML119WQ03208 357 aa3.81□□□□□ -1.8
WHI3YNL197C YMR206WQ03695 313 aa3.81□□□□□ -1.8
WHI3YNL197C YDR179W-AQ03983 463 aa3.81□□□□□ -1.8
WHI3YNL197C ENT1Q12518 454 aa3.81□□□□□ -1.8
WHI3YNL197C YBR255C-AQ3E776 120 aa3.81□□□□□ -1.8
WHI3YNL197C YML003WP0CF16 290 aa3.8□□□□□ -1.8
WHI3YNL197C PFK2P16862 959 aaKnown RBP RIP-Chip data3.8□□□□□ -1.8not detected
WHI3YNL197C KGD2P19262 463 aaPredicted RBP3.8□□□□□ -1.8
WHI3YNL197C YJL206CP39529 758 aa3.8□□□□□ -1.8
WHI3YNL197C ARG2P40360 574 aa3.8□□□□□ -1.8
WHI3YNL197C LYS14P40971 790 aa3.8□□□□□ -1.8
WHI3YNL197C SPC98P53540 846 aa3.8□□□□□ -1.8
WHI3YNL197C TIM10P87108 93 aa3.8□□□□□ -1.8
WHI3YNL197C REG1Q00816 1014 aa3.8□□□□□ -1.8
WHI3YNL197C TRS23Q03784 219 aa3.8□□□□□ -1.8
WHI3YNL197C RCO1Q04779 684 aa3.8□□□□□ -1.8
WHI3YNL197C TMA16Q08687 178 aa3.8□□□□□ -1.8
WHI3YNL197C TUB2P02557 457 aaKnown RBP3.8□□□□□ -1.8
WHI3YNL197C ERG8P24521 451 aa3.8□□□□□ -1.8
WHI3YNL197C GMH1P36125 273 aa3.8□□□□□ -1.8
WHI3YNL197C YJR061WP40355 935 aa3.8□□□□□ -1.8
WHI3YNL197C ARE2P53629 642 aaKnown RBP3.8□□□□□ -1.8
WHI3YNL197C BSC5P53755 489 aa3.8□□□□□ -1.8
WHI3YNL197C YSA1Q01976 231 aa3.8□□□□□ -1.8
WHI3YNL197C MTG1Q03151 367 aaPredicted RBP3.8□□□□□ -1.8
WHI3YNL197C GTB1Q04924 702 aa3.8□□□□□ -1.8
WHI3YNL197C PSK2Q08217 1101 aa3.8□□□□□ -1.8
WHI3YNL197C YPL216WQ08964 1102 aa3.8□□□□□ -1.8
WHI3YNL197C TAF3Q12297 353 aa3.8□□□□□ -1.8
WHI3YNL197C YPK1P12688 680 aaKnown RBP3.79□□□□□ -1.8
WHI3YNL197C LRE1P25579 583 aaKnown RBP3.79□□□□□ -1.8
WHI3YNL197C NFU1P32860 256 aa3.79□□□□□ -1.8
WHI3YNL197C AIM21P40563 679 aa3.79□□□□□ -1.8
WHI3YNL197C VPS4P52917 437 aa3.79□□□□□ -1.8
WHI3YNL197C SLI1P53304 468 aa3.79□□□□□ -1.8
WHI3YNL197C GIR2Q03768 265 aaPredicted RBP3.79□□□□□ -1.8
WHI3YNL197C GSF2Q04697 403 aaKnown RBP3.79□□□□□ -1.8
WHI3YNL197C VIP1Q06685 1146 aaKnown RBP3.79□□□□□ -1.8
WHI3YNL197C YDL242WQ07746 117 aa3.79□□□□□ -1.8
WHI3YNL197C YER175W-AQ8TGU4 54 aa3.79□□□□□ -1.8
WHI3YNL197C INH1P01097 85 aa3.78□□□□□ -1.8
WHI3YNL197C AAC1P04710 309 aa3.78□□□□□ -1.8
WHI3YNL197C OLE1P21147 510 aaKnown RBP3.78□□□□□ -1.8
Retrieved 100 of 5,963 RNA–protein pairs in 543 ms