RNA–Protein interactions for RNA: YLR403W

SFP1, Transcript of Regulates transcription of ribosomal protein and biogenesis genes, yeastyeast

Gene SFP1, Length 2,052 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SFP1YLR403W DAM1P53267 343 aa9.2□□□□□ -0.94
SFP1YLR403W YDR131CQ03899 556 aa9.2□□□□□ -0.94
SFP1YLR403W UFO1Q04511 668 aa9.2□□□□□ -0.94
SFP1YLR403W ESC8Q08119 714 aa9.2□□□□□ -0.94
SFP1YLR403W YAP7Q08182 245 aa9.2□□□□□ -0.94
SFP1YLR403W GFA1P14742 717 aaKnown RBP9.19□□□□□ -0.94
SFP1YLR403W RGP1P16664 663 aa9.19□□□□□ -0.94
SFP1YLR403W IRE1P32361 1115 aa9.19□□□□□ -0.94
SFP1YLR403W STB6P36085 766 aa9.19□□□□□ -0.94
SFP1YLR403W LAS1P36146 502 aaPredicted RBP9.19□□□□□ -0.94
SFP1YLR403W SEC31P38968 1273 aaKnown RBP9.19□□□□□ -0.94
SFP1YLR403W CCT2P39076 527 aaKnown RBP9.19□□□□□ -0.94
SFP1YLR403W UTP25P40498 721 aaKnown RBP9.19□□□□□ -0.94
SFP1YLR403W BUB1P41695 1021 aaKnown RBP RIP-Chip data9.19□□□□□ -0.94not detected
SFP1YLR403W YFR018CP43599 363 aa9.19□□□□□ -0.94
SFP1YLR403W RSM26P47141 266 aa9.19□□□□□ -0.94
SFP1YLR403W CTF18P49956 741 aa9.19□□□□□ -0.94
SFP1YLR403W SEH1P53011 349 aaKnown RBP9.19□□□□□ -0.94
SFP1YLR403W MNP1P53163 194 aaPredicted RBP9.19□□□□□ -0.94
SFP1YLR403W NAF1P53919 492 aaKnown RBP9.19□□□□□ -0.94
SFP1YLR403W SDH1Q00711 640 aa9.19□□□□□ -0.94
SFP1YLR403W CRR1Q05790 422 aa9.19□□□□□ -0.94
SFP1YLR403W DSE3Q08729 430 aa9.19□□□□□ -0.94
SFP1YLR403W RAX1Q08760 435 aa9.19□□□□□ -0.94
SFP1YLR403W MDM20Q12387 796 aaKnown RBP9.19□□□□□ -0.94
SFP1YLR403W YOR131CQ12486 218 aa9.19□□□□□ -0.94
SFP1YLR403W CBP2P03874 630 aaPredicted RBP9.19□□□□□ -0.94
SFP1YLR403W ARG3P05150 338 aa9.19□□□□□ -0.94
SFP1YLR403W GAL3P13045 520 aa9.19□□□□□ -0.94
SFP1YLR403W MCM4P30665 933 aaKnown RBP9.19□□□□□ -0.94
SFP1YLR403W KTR4P38131 464 aa9.19□□□□□ -0.94
SFP1YLR403W MCX1P38323 520 aaPredicted RBP9.19□□□□□ -0.94
SFP1YLR403W SSP120P39931 234 aaKnown RBP9.19□□□□□ -0.94
SFP1YLR403W YER184CP39961 794 aa9.19□□□□□ -0.94
SFP1YLR403W PIG2P40187 538 aa9.19□□□□□ -0.94
SFP1YLR403W SIP5P40210 489 aaKnown RBP9.19□□□□□ -0.94
SFP1YLR403W LOC1P43586 204 aaPredicted RBP9.19□□□□□ -0.94
SFP1YLR403W ENT3P47160 408 aa9.19□□□□□ -0.94
SFP1YLR403W YGR111WP53265 400 aa9.19□□□□□ -0.94
SFP1YLR403W CAF40P53829 373 aa9.19□□□□□ -0.94
SFP1YLR403W SKI7Q08491 747 aaPredicted RBP9.19□□□□□ -0.94
SFP1YLR403W SPE3Q12074 293 aaKnown RBP9.19□□□□□ -0.94
SFP1YLR403W DCS2Q12123 353 aa9.19□□□□□ -0.94
SFP1YLR403W YBT1P32386 1661 aa9.19□□□□□ -0.94
SFP1YLR403W MLP1Q02455 1875 aaKnown RBP9.18□□□□□ -0.94
SFP1YLR403W GCD1P09032 578 aaPredicted RBP9.18□□□□□ -0.94
SFP1YLR403W RIT1P23796 513 aa9.18□□□□□ -0.94
SFP1YLR403W PMT2P31382 759 aa9.18□□□□□ -0.94
SFP1YLR403W LYP1P32487 611 aa9.18□□□□□ -0.94
SFP1YLR403W RPT5P33297 434 aaKnown RBP9.18□□□□□ -0.94
SFP1YLR403W SEA4P38164 1038 aa9.18□□□□□ -0.94
SFP1YLR403W MSG5P38590 489 aa9.18□□□□□ -0.94
SFP1YLR403W GND1P38720 489 aaKnown RBP9.18□□□□□ -0.94
SFP1YLR403W YHR131CP38835 850 aa9.18□□□□□ -0.94
SFP1YLR403W ERG10P41338 398 aaKnown RBP9.18□□□□□ -0.94
SFP1YLR403W IMP4P53941 290 aaKnown RBP9.18□□□□□ -0.94
SFP1YLR403W JIP4Q03361 876 aa9.18□□□□□ -0.94
SFP1YLR403W CLU1Q03690 1277 aaKnown RBP9.18□□□□□ -0.94
SFP1YLR403W MUM3Q08750 479 aa9.18□□□□□ -0.94
SFP1YLR403W ATG34Q12292 412 aa9.18□□□□□ -0.94
SFP1YLR403W FMP16Q12497 93 aa9.18□□□□□ -0.94
SFP1YLR403W FBP1P09201 348 aa9.17□□□□□ -0.94
SFP1YLR403W MRP2P10663 115 aaPredicted RBP9.17□□□□□ -0.94
SFP1YLR403W HSF1P10961 833 aa9.17□□□□□ -0.94
SFP1YLR403W TRX1P22217 103 aaKnown RBP9.17□□□□□ -0.94
SFP1YLR403W UTP30P36144 274 aaKnown RBP9.17□□□□□ -0.94
SFP1YLR403W FMP32P43557 207 aa9.17□□□□□ -0.94
SFP1YLR403W VHS1Q03785 461 aa9.17□□□□□ -0.94
SFP1YLR403W DLT1Q04216 342 aa9.17□□□□□ -0.94
SFP1YLR403W GAD1Q04792 585 aa9.17□□□□□ -0.94
SFP1YLR403W THI3Q07471 609 aa9.17□□□□□ -0.94
SFP1YLR403W MSC6Q08818 692 aaKnown RBP9.17□□□□□ -0.94
SFP1YLR403W CCP1P00431 361 aa9.17□□□□□ -0.94
SFP1YLR403W RPP1AP05318 106 aaPredicted RBP9.17□□□□□ -0.94
SFP1YLR403W NSP1P14907 823 aaKnown RBP9.17□□□□□ -0.94
SFP1YLR403W ATG22P25568 528 aa9.17□□□□□ -0.94
SFP1YLR403W SRP101P32916 621 aa9.17□□□□□ -0.94
SFP1YLR403W YBL055CP34220 418 aaPredicted RBP9.17□□□□□ -0.94
SFP1YLR403W ALG5P40350 334 aa9.17□□□□□ -0.94
SFP1YLR403W EFM4P40516 257 aa9.17□□□□□ -0.94
SFP1YLR403W PKP1P40530 394 aa9.17□□□□□ -0.94
SFP1YLR403W NMD5P46970 1048 aa9.17□□□□□ -0.94
SFP1YLR403W SOL4P53315 255 aa9.17□□□□□ -0.94
SFP1YLR403W LGE1Q02796 332 aaKnown RBP9.17□□□□□ -0.94
SFP1YLR403W NHP10Q03435 203 aa9.17□□□□□ -0.94
SFP1YLR403W SPH1Q06160 661 aa9.17□□□□□ -0.94
SFP1YLR403W RTT109Q07794 436 aa9.17□□□□□ -0.94
SFP1YLR403W SCEIP03882 235 aa9.16□□□□□ -0.94
SFP1YLR403W CHS2P14180 963 aa9.16□□□□□ -0.94
SFP1YLR403W MET8P15807 274 aa9.16□□□□□ -0.94
SFP1YLR403W GBP2P25555 427 aaKnown RBP RIP-Chip data9.16□□□□□ -0.94not detected
SFP1YLR403W NAT2P37293 288 aa9.16□□□□□ -0.94
SFP1YLR403W YMR134WP40207 237 aa9.16□□□□□ -0.94
SFP1YLR403W TOK1P40310 691 aa9.16□□□□□ -0.94
SFP1YLR403W PRP24P49960 444 aaKnown RBP9.16□□□□□ -0.94
SFP1YLR403W YNL040WP53960 456 aaPredicted RBP9.16□□□□□ -0.94
SFP1YLR403W YMR279CQ03263 540 aa9.16□□□□□ -0.94
SFP1YLR403W RTT103Q05543 409 aa9.16□□□□□ -0.94
SFP1YLR403W RRI2Q12348 645 aa9.16□□□□□ -0.94
SFP1YLR403W ATP12P22135 325 aa9.16□□□□□ -0.94
Retrieved 100 of 5,963 RNA–protein pairs in 15.3 ms