RNA–Protein interactions for RNA: YLR175W

CBF5, Transcript of Pseudouridine synthase catalytic subunit of box H/ACA snoRNPs, yeastyeast

Gene CBF5, Length 1,452 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CBF5YLR175W TPO1Q07824 586 aa4.72□□□□□ -1.65
CBF5YLR175W LCB4Q12246 624 aa4.72□□□□□ -1.65
CBF5YLR175W AHC1Q12433 566 aa4.72□□□□□ -1.65
CBF5YLR175W AVL9Q12500 764 aa4.72□□□□□ -1.65
CBF5YLR175W IZH4Q99393 312 aa4.72□□□□□ -1.65
CBF5YLR175W MAS1P10507 462 aa4.71□□□□□ -1.66
CBF5YLR175W YCR015CP25616 317 aa4.71□□□□□ -1.66
CBF5YLR175W SYN8P31377 255 aa4.71□□□□□ -1.66
CBF5YLR175W PLC1P32383 869 aa4.71□□□□□ -1.66
CBF5YLR175W PEX2P32800 271 aa4.71□□□□□ -1.66
CBF5YLR175W HSP78P33416 811 aa4.71□□□□□ -1.66
CBF5YLR175W MUD2P36084 527 aaKnown RBP4.71□□□□□ -1.66
CBF5YLR175W ECM2P38241 364 aaKnown RBP4.71□□□□□ -1.66
CBF5YLR175W SIF2P38262 535 aa4.71□□□□□ -1.66
CBF5YLR175W SPP381P38282 291 aaPredicted RBP4.71□□□□□ -1.66
CBF5YLR175W VHC1P38329 1120 aa4.71□□□□□ -1.66
CBF5YLR175W POP4P38336 279 aa4.71□□□□□ -1.66
CBF5YLR175W NMD3P38861 518 aaKnown RBP4.71□□□□□ -1.66
CBF5YLR175W AIM18P38884 321 aa4.71□□□□□ -1.66
CBF5YLR175W FLC2P39719 783 aa4.71□□□□□ -1.66
CBF5YLR175W BTT1P40314 149 aaPredicted RBP4.71□□□□□ -1.66
CBF5YLR175W NTA1P40354 457 aa4.71□□□□□ -1.66
CBF5YLR175W MND2P40577 368 aa4.71□□□□□ -1.66
CBF5YLR175W RGD2P43556 714 aa4.71□□□□□ -1.66
CBF5YLR175W YJR115WP47152 169 aa4.71□□□□□ -1.66
CBF5YLR175W RFX1P48743 811 aa4.71□□□□□ -1.66
CBF5YLR175W MTD1Q02046 320 aaKnown RBP4.71□□□□□ -1.66
CBF5YLR175W BSC2Q05611 235 aa4.71□□□□□ -1.66
CBF5YLR175W AAD4Q07747 329 aa4.71□□□□□ -1.66
CBF5YLR175W FAP7Q12055 197 aaPredicted RBP4.71□□□□□ -1.66
CBF5YLR175W GCR1P07261 785 aa4.7□□□□□ -1.66
CBF5YLR175W MTF1P14908 341 aaKnown RBP4.7□□□□□ -1.66
CBF5YLR175W SPO16P17122 198 aa4.7□□□□□ -1.66
CBF5YLR175W YIH1P25637 258 aa4.7□□□□□ -1.66
CBF5YLR175W URK1P27515 501 aa4.7□□□□□ -1.66
CBF5YLR175W YME1P32795 747 aa4.7□□□□□ -1.66
CBF5YLR175W IRS4P36115 615 aaKnown RBP4.7□□□□□ -1.66
CBF5YLR175W YBR056WP38081 501 aa4.7□□□□□ -1.66
CBF5YLR175W ECM13P38195 257 aa4.7□□□□□ -1.66
CBF5YLR175W FUI1P38196 639 aa4.7□□□□□ -1.66
CBF5YLR175W YBR225WP38321 900 aa4.7□□□□□ -1.66
CBF5YLR175W DIA4P38705 446 aaPredicted RBP4.7□□□□□ -1.66
CBF5YLR175W FSH1P38777 243 aaKnown RBP4.7□□□□□ -1.66
CBF5YLR175W LAM1P38851 1228 aa4.7□□□□□ -1.66
CBF5YLR175W FAF1P40546 346 aaPredicted RBP4.7□□□□□ -1.66
CBF5YLR175W YIR016WP40572 265 aa4.7□□□□□ -1.66
CBF5YLR175W INA22P40576 216 aa4.7□□□□□ -1.66
CBF5YLR175W NUP85P46673 744 aa4.7□□□□□ -1.66
CBF5YLR175W MNN11P46985 422 aaKnown RBP4.7□□□□□ -1.66
CBF5YLR175W KTR6P54070 446 aa4.7□□□□□ -1.66
CBF5YLR175W HER2Q03557 464 aa4.7□□□□□ -1.66
CBF5YLR175W RKM2Q03942 479 aa4.7□□□□□ -1.66
CBF5YLR175W SPG3Q04398 127 aaPredicted RBP4.7□□□□□ -1.66
CBF5YLR175W GPM3Q12326 303 aa4.7□□□□□ -1.66
CBF5YLR175W ARP7Q12406 477 aa4.7□□□□□ -1.66
CBF5YLR175W SPE1P08432 466 aa4.69□□□□□ -1.66
CBF5YLR175W ADH4P10127 382 aa4.69□□□□□ -1.66
CBF5YLR175W CDC24P11433 854 aaPredicted RBP4.69□□□□□ -1.66
CBF5YLR175W HMG2P12684 1045 aa4.69□□□□□ -1.66
CBF5YLR175W RAD16P31244 790 aa4.69□□□□□ -1.66
CBF5YLR175W RAD5P32849 1169 aaPredicted RBP4.69□□□□□ -1.66
CBF5YLR175W RPC37P36121 282 aa4.69□□□□□ -1.66
CBF5YLR175W PBP2P38151 413 aaKnown RBP RIP-Chip data4.69□□□□□ -1.66not detected
CBF5YLR175W GIP1P38229 639 aa4.69□□□□□ -1.66
CBF5YLR175W SAW1P39735 261 aa4.69□□□□□ -1.66
CBF5YLR175W MAF1P41910 395 aa4.69□□□□□ -1.66
CBF5YLR175W RTT101P47050 842 aa4.69□□□□□ -1.66
CBF5YLR175W YJR098CP47139 656 aa4.69□□□□□ -1.66
CBF5YLR175W TCB2P48231 1178 aa4.69□□□□□ -1.66
CBF5YLR175W PSP1P50896 841 aaKnown RBP4.69□□□□□ -1.66
CBF5YLR175W MTO1P53070 669 aa4.69□□□□□ -1.66
CBF5YLR175W YPR003CP53394 754 aa4.69□□□□□ -1.66
CBF5YLR175W COP1P53622 1201 aaKnown RBP4.69□□□□□ -1.66
CBF5YLR175W VPS9P54787 451 aa4.69□□□□□ -1.66
CBF5YLR175W MSH6Q03834 1242 aa4.69□□□□□ -1.66
CBF5YLR175W YLL056CQ12177 298 aa4.69□□□□□ -1.66
CBF5YLR175W SVS1Q12254 260 aa4.69□□□□□ -1.66
CBF5YLR175W TY1A-DR3Q12441 440 aa4.69□□□□□ -1.66
CBF5YLR175W YPR117WQ06116 2489 aa4.69□□□□□ -1.66
CBF5YLR175W QCR6P00127 147 aa4.69□□□□□ -1.66
CBF5YLR175W PAB1P04147 577 aaKnown RBP RIP-Chip data4.69□□□□□ -1.66not detected
CBF5YLR175W IMA3P0CW40 589 aa4.69□□□□□ -1.66
CBF5YLR175W IMA4P0CW41 589 aa4.69□□□□□ -1.66
CBF5YLR175W HEM15P16622 393 aa4.69□□□□□ -1.66
CBF5YLR175W DUG2P38149 878 aa4.69□□□□□ -1.66
CBF5YLR175W MSR1P38714 643 aa4.69□□□□□ -1.66
CBF5YLR175W RIM4P38741 713 aa4.69□□□□□ -1.66
CBF5YLR175W SFB3P38810 929 aa4.69□□□□□ -1.66
CBF5YLR175W NUP60P39705 539 aa4.69□□□□□ -1.66
CBF5YLR175W LSB6P42951 607 aa4.69□□□□□ -1.66
CBF5YLR175W RRT5P43607 289 aa4.69□□□□□ -1.66
CBF5YLR175W SAE2P46946 345 aa4.69□□□□□ -1.66
CBF5YLR175W YJL132WP47014 750 aa4.69□□□□□ -1.66
CBF5YLR175W RNT1Q02555 471 aa4.69□□□□□ -1.66
CBF5YLR175W SHR3Q02774 210 aa4.69□□□□□ -1.66
CBF5YLR175W GCN5Q03330 439 aa4.69□□□□□ -1.66
CBF5YLR175W ARA2Q04212 335 aa4.69□□□□□ -1.66
CBF5YLR175W STE23Q06010 1027 aa4.69□□□□□ -1.66
CBF5YLR175W YLR257WQ06146 321 aaKnown RBP4.69□□□□□ -1.66
CBF5YLR175W PIG1Q06216 648 aa4.69□□□□□ -1.66
Retrieved 100 of 5,963 RNA–protein pairs in 50.3 ms