RNA–Protein interactions for RNA: YLR008C

PAM18, Transcript of Subunit of the import motor (PAM complex), yeast

Gene PAM18, Length 507 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PAM18	YLR008C	YHL012W	P38709	493 aa		4.17	□□□□□ -1.74
PAM18	YLR008C	ARF3	P40994	183 aa	RIP-Chip data	4.17	□□□□□ -1.74	not detected
PAM18	YLR008C	OYE3	P41816	400 aa	Predicted RBP	4.17	□□□□□ -1.74
PAM18	YLR008C	PXA1	P41909	870 aa		4.17	□□□□□ -1.74
PAM18	YLR008C	MET12	P46151	657 aa		4.17	□□□□□ -1.74
PAM18	YLR008C	LYS4	P49367	693 aa	Predicted RBP	4.17	□□□□□ -1.74
PAM18	YLR008C	YBP2	P53169	641 aa		4.17	□□□□□ -1.74
PAM18	YLR008C	RPN14	P53196	417 aa		4.17	□□□□□ -1.74
PAM18	YLR008C	ART5	P53244	586 aa	Known RBP	4.17	□□□□□ -1.74
PAM18	YLR008C	TOF1	P53840	1238 aa		4.17	□□□□□ -1.74
PAM18	YLR008C	MRPL13	Q02204	264 aa		4.17	□□□□□ -1.74
PAM18	YLR008C	TOF2	Q02208	771 aa		4.17	□□□□□ -1.74
PAM18	YLR008C	VBA4	Q04602	768 aa	Known RBP	4.17	□□□□□ -1.74
PAM18	YLR008C	GGA1	Q06336	557 aa		4.17	□□□□□ -1.74
PAM18	YLR008C	YDL144C	Q07589	356 aa		4.17	□□□□□ -1.74
PAM18	YLR008C	TRE1	Q08919	783 aa		4.17	□□□□□ -1.74
PAM18	YLR008C	HMI1	Q12039	706 aa		4.17	□□□□□ -1.74
PAM18	YLR008C	NUR1	Q12066	484 aa		4.17	□□□□□ -1.74
PAM18	YLR008C	ADF1	Q2V2Q1	113 aa		4.17	□□□□□ -1.74
PAM18	YLR008C	LEU2	P04173	364 aa	Predicted RBP	4.16	□□□□□ -1.74
PAM18	YLR008C	FUM1	P08417	488 aa	Known RBP	4.16	□□□□□ -1.74
PAM18	YLR008C	NUC1	P08466	329 aa		4.16	□□□□□ -1.74
PAM18	YLR008C	APE1	P14904	514 aa		4.16	□□□□□ -1.74
PAM18	YLR008C	POL3	P15436	1097 aa		4.16	□□□□□ -1.74
PAM18	YLR008C	HOP1	P20050	605 aa		4.16	□□□□□ -1.74
PAM18	YLR008C	DBP3	P20447	523 aa	Known RBP	4.16	□□□□□ -1.74
PAM18	YLR008C	DBP2	P24783	546 aa	Known RBP	4.16	□□□□□ -1.74
PAM18	YLR008C	ADK2	P26364	225 aa		4.16	□□□□□ -1.74
PAM18	YLR008C	PRO1	P32264	428 aa		4.16	□□□□□ -1.74
PAM18	YLR008C	DPH5	P32469	300 aa	Predicted RBP	4.16	□□□□□ -1.74
PAM18	YLR008C	BUD2	P33314	1104 aa		4.16	□□□□□ -1.74
PAM18	YLR008C	YKL107W	P34251	309 aa		4.16	□□□□□ -1.74
PAM18	YLR008C	YUH1	P35127	236 aa		4.16	□□□□□ -1.74
PAM18	YLR008C	GCS1	P35197	352 aa		4.16	□□□□□ -1.74
PAM18	YLR008C	SWH1	P35845	1188 aa		4.16	□□□□□ -1.74
PAM18	YLR008C	RMA1	P36001	430 aa	Known RBP	4.16	□□□□□ -1.74
PAM18	YLR008C	IFA38	P38286	347 aa		4.16	□□□□□ -1.74
PAM18	YLR008C	PPE1	P38796	400 aa		4.16	□□□□□ -1.74
PAM18	YLR008C	HXT6	P39003	570 aa	Known RBP	4.16	□□□□□ -1.74
PAM18	YLR008C	HXT7	P39004	570 aa		4.16	□□□□□ -1.74
PAM18	YLR008C	YER010C	P40011	234 aa		4.16	□□□□□ -1.74
PAM18	YLR008C	ATF1	P40353	525 aa		4.16	□□□□□ -1.74
PAM18	YLR008C	FET5	P43561	622 aa		4.16	□□□□□ -1.74
PAM18	YLR008C	CAF16	P43569	289 aa		4.16	□□□□□ -1.74
PAM18	YLR008C	TCB2	P48231	1178 aa		4.16	□□□□□ -1.74
PAM18	YLR008C	MDR1	P53258	950 aa		4.16	□□□□□ -1.74
PAM18	YLR008C	LSC1	P53598	329 aa	Known RBP	4.16	□□□□□ -1.74
PAM18	YLR008C	SNF12	P53628	566 aa		4.16	□□□□□ -1.74
PAM18	YLR008C	GIM3	P53900	129 aa		4.16	□□□□□ -1.74
PAM18	YLR008C	EOS1	P53938	366 aa		4.16	□□□□□ -1.74
PAM18	YLR008C	YNL050C	P53952	270 aa		4.16	□□□□□ -1.74
PAM18	YLR008C	TIF35	Q04067	274 aa	Known RBP	4.16	□□□□□ -1.74
PAM18	YLR008C	RBA50	Q04418	439 aa		4.16	□□□□□ -1.74
PAM18	YLR008C	SNO4	Q04902	237 aa		4.16	□□□□□ -1.74
PAM18	YLR008C	MRD1	Q06106	887 aa	Known RBP	4.16	□□□□□ -1.74
PAM18	YLR008C	TFC6	Q06339	672 aa		4.16	□□□□□ -1.74
PAM18	YLR008C	YDR306C	Q06640	478 aa		4.16	□□□□□ -1.74
PAM18	YLR008C	OMS1	Q06668	471 aa		4.16	□□□□□ -1.74
PAM18	YLR008C	RRT8	Q08219	342 aa		4.16	□□□□□ -1.74
PAM18	YLR008C	ETT1	Q08421	412 aa	Known RBP	4.16	□□□□□ -1.74
PAM18	YLR008C	HSP33	Q08914	237 aa	Known RBP	4.16	□□□□□ -1.74
PAM18	YLR008C	HSP32	Q08992	237 aa		4.16	□□□□□ -1.74
PAM18	YLR008C	PSY3	Q12318	242 aa		4.16	□□□□□ -1.74
PAM18	YLR008C	BCK1	Q01389	1478 aa		4.16	□□□□□ -1.74
PAM18	YLR008C	TPK1	P06244	397 aa		4.15	□□□□□ -1.75
PAM18	YLR008C	DBP5	P20449	482 aa	Known RBP	4.15	□□□□□ -1.75
PAM18	YLR008C	UBC1	P21734	215 aa	Known RBP	4.15	□□□□□ -1.75
PAM18	YLR008C	ATP12	P22135	325 aa		4.15	□□□□□ -1.75
PAM18	YLR008C	ADP1	P25371	1049 aa		4.15	□□□□□ -1.75
PAM18	YLR008C	SPS22	P25380	463 aa		4.15	□□□□□ -1.75
PAM18	YLR008C	EFB1	P32471	206 aa	Known RBP	4.15	□□□□□ -1.75
PAM18	YLR008C	NGG1	P32494	702 aa		4.15	□□□□□ -1.75
PAM18	YLR008C	RGD1	P38339	666 aa		4.15	□□□□□ -1.75
PAM18	YLR008C	TDA3	P38758	523 aa		4.15	□□□□□ -1.75
PAM18	YLR008C	PTC7	P38797	343 aa		4.15	□□□□□ -1.75
PAM18	YLR008C	EFM4	P40516	257 aa		4.15	□□□□□ -1.75
PAM18	YLR008C	GTS1	P40956	396 aa		4.15	□□□□□ -1.75
PAM18	YLR008C	BNA2	P47125	453 aa		4.15	□□□□□ -1.75
PAM18	YLR008C	HFM1	P51979	1187 aa		4.15	□□□□□ -1.75
PAM18	YLR008C	NNF2	P53253	936 aa		4.15	□□□□□ -1.75
PAM18	YLR008C	DSL1	P53847	754 aa		4.15	□□□□□ -1.75
PAM18	YLR008C	RPT6	Q01939	405 aa	Known RBP	4.15	□□□□□ -1.75
PAM18	YLR008C	HOS3	Q02959	697 aa	Known RBP	4.15	□□□□□ -1.75
PAM18	YLR008C	SSY1	Q03770	852 aa		4.15	□□□□□ -1.75
PAM18	YLR008C	YHM2	Q04013	314 aa		4.15	□□□□□ -1.75
PAM18	YLR008C	RRB1	Q04225	511 aa	Known RBP	4.15	□□□□□ -1.75
PAM18	YLR008C	COG8	Q04632	607 aa		4.15	□□□□□ -1.75
PAM18	YLR008C	ERB1	Q04660	807 aa	Known RBP	4.15	□□□□□ -1.75
PAM18	YLR008C	DON1	Q05610	365 aa		4.15	□□□□□ -1.75
PAM18	YLR008C	YLR456W	Q06199	204 aa		4.15	□□□□□ -1.75
PAM18	YLR008C	PML1	Q07930	204 aa	Predicted RBP	4.15	□□□□□ -1.75
PAM18	YLR008C	GUP2	Q08929	609 aa		4.15	□□□□□ -1.75
PAM18	YLR008C	YPL260W	Q08977	551 aa		4.15	□□□□□ -1.75
PAM18	YLR008C	NOP56	Q12460	504 aa	Known RBP RIP-Chip data	4.15	□□□□□ -1.75	not detected
PAM18	YLR008C	KCS1	Q12494	1050 aa		4.15	□□□□□ -1.75
PAM18	YLR008C	AVL9	Q12500	764 aa		4.15	□□□□□ -1.75
PAM18	YLR008C	SKS1	Q12505	502 aa		4.15	□□□□□ -1.75
PAM18	YLR008C	RPS21B	Q3E754	87 aa	Known RBP	4.15	□□□□□ -1.75
PAM18	YLR008C	NUP192	P47054	1683 aa		4.15	□□□□□ -1.75
PAM18	YLR008C	AAR2	P32357	355 aa	Predicted RBP	4.14	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 75.4 ms