RNA–Protein interactions for RNA: YKL139W

CTK1, Transcript of Catalytic (alpha) subunit of C-terminal domain kinase I (CTDK-I), yeastyeast

Gene CTK1, Length 1,587 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTK1YKL139W CLU1Q03690 1277 aaKnown RBP4.44□□□□□ -1.7
CTK1YKL139W YKU80Q04437 629 aa4.44□□□□□ -1.7
CTK1YKL139W TDA9Q04545 1251 aa4.44□□□□□ -1.7
CTK1YKL139W YSH1Q06224 779 aaPredicted RBP4.44□□□□□ -1.7
CTK1YKL139W PNO1Q99216 274 aaKnown RBP4.44□□□□□ -1.7
CTK1YKL139W ALG7P07286 448 aa4.44□□□□□ -1.7
CTK1YKL139W CAP1P28495 268 aaKnown RBP4.44□□□□□ -1.7
CTK1YKL139W MRP20P32387 263 aa4.44□□□□□ -1.7
CTK1YKL139W PSD1P39006 500 aa4.44□□□□□ -1.7
CTK1YKL139W MPT5P39016 859 aaKnown RBP RIP-Chip data4.44□□□□□ -1.7not detected
CTK1YKL139W FMP10P40098 244 aa4.44□□□□□ -1.7
CTK1YKL139W SKP2P42843 763 aa4.44□□□□□ -1.7
CTK1YKL139W SIP4P46954 829 aa4.44□□□□□ -1.7
CTK1YKL139W YGR151CP53287 111 aa4.44□□□□□ -1.7
CTK1YKL139W SPC19Q03954 165 aa4.44□□□□□ -1.7
CTK1YKL139W NBP2Q12163 236 aa4.44□□□□□ -1.7
CTK1YKL139W RVB2Q12464 471 aaKnown RBP4.44□□□□□ -1.7
CTK1YKL139W ABF1P14164 731 aa4.43□□□□□ -1.7
CTK1YKL139W THI80P35202 319 aa4.43□□□□□ -1.7
CTK1YKL139W IRC24P40580 263 aa4.43□□□□□ -1.7
CTK1YKL139W VTC2P43585 828 aa4.43□□□□□ -1.7
CTK1YKL139W DIP5P53388 608 aa4.43□□□□□ -1.7
CTK1YKL139W RNT1Q02555 471 aa4.43□□□□□ -1.7
CTK1YKL139W MFM1Q02783 413 aa4.43□□□□□ -1.7
CTK1YKL139W VIP1Q06685 1146 aaKnown RBP4.43□□□□□ -1.7
CTK1YKL139W TMA16Q08687 178 aa4.43□□□□□ -1.7
CTK1YKL139W TAH18Q12181 623 aa4.43□□□□□ -1.7
CTK1YKL139W RNQ1P25367 405 aa4.42□□□□□ -1.7
CTK1YKL139W HRR25P29295 494 aaKnown RBP4.42□□□□□ -1.7
CTK1YKL139W SGM1P47166 707 aa4.42□□□□□ -1.7
CTK1YKL139W DUO1P53168 247 aaKnown RBP4.42□□□□□ -1.7
CTK1YKL139W NMA2P53204 395 aa4.42□□□□□ -1.7
CTK1YKL139W SNF12P53628 566 aa4.42□□□□□ -1.7
CTK1YKL139W MRPL19P53875 158 aa4.42□□□□□ -1.7
CTK1YKL139W YLR040CQ07988 224 aa4.42□□□□□ -1.7
CTK1YKL139W AIM39Q08223 395 aa4.42□□□□□ -1.7
CTK1YKL139W TUB2P02557 457 aaKnown RBP4.41□□□□□ -1.7
CTK1YKL139W RPB2P08518 1224 aaKnown RBP4.41□□□□□ -1.7
CTK1YKL139W CDC24P11433 854 aaPredicted RBP4.41□□□□□ -1.7
CTK1YKL139W ERG8P24521 451 aa4.41□□□□□ -1.7
CTK1YKL139W SGF29P25554 259 aa4.41□□□□□ -1.7
CTK1YKL139W URK1P27515 501 aa4.41□□□□□ -1.7
CTK1YKL139W YBR225WP38321 900 aa4.41□□□□□ -1.7
CTK1YKL139W SDH8P38345 138 aa4.41□□□□□ -1.7
CTK1YKL139W ARC1P46672 376 aaKnown RBP4.41□□□□□ -1.7
CTK1YKL139W YSA1Q01976 231 aa4.41□□□□□ -1.7
CTK1YKL139W MTG1Q03151 367 aaPredicted RBP4.41□□□□□ -1.7
CTK1YKL139W USA1Q03714 838 aa4.41□□□□□ -1.7
CTK1YKL139W RCO1Q04779 684 aa4.41□□□□□ -1.7
CTK1YKL139W MFB1Q04922 465 aa4.41□□□□□ -1.7
CTK1YKL139W ENT4Q07872 247 aa4.41□□□□□ -1.7
CTK1YKL139W RKI1Q12189 258 aa4.41□□□□□ -1.7
CTK1YKL139W YOR111WQ99210 232 aa4.41□□□□□ -1.7
CTK1YKL139W PPR1P07272 904 aaPredicted RBP4.4□□□□□ -1.7
CTK1YKL139W RPL19AP0CX82 189 aaKnown RBP4.4□□□□□ -1.7
CTK1YKL139W RPL19BP0CX83 189 aaPredicted RBP4.4□□□□□ -1.7
CTK1YKL139W OLE1P21147 510 aaKnown RBP4.4□□□□□ -1.7
CTK1YKL139W HCM1P25364 564 aa4.4□□□□□ -1.7
CTK1YKL139W PGS1P25578 521 aa4.4□□□□□ -1.7
CTK1YKL139W SAC6P32599 642 aaKnown RBP4.4□□□□□ -1.7
CTK1YKL139W PPS1P38148 807 aa4.4□□□□□ -1.7
CTK1YKL139W SUL1P38359 859 aa4.4□□□□□ -1.7
CTK1YKL139W KSP1P38691 1029 aaKnown RBP4.4□□□□□ -1.7
CTK1YKL139W IRC6P43615 237 aa4.4□□□□□ -1.7
CTK1YKL139W ASE1P50275 885 aa4.4□□□□□ -1.7
CTK1YKL139W VPS4P52917 437 aa4.4□□□□□ -1.7
CTK1YKL139W YIP4P53093 235 aa4.4□□□□□ -1.7
CTK1YKL139W ARE2P53629 642 aaKnown RBP4.4□□□□□ -1.7
CTK1YKL139W DAK1P54838 584 aaKnown RBP4.4□□□□□ -1.7
CTK1YKL139W UFO1Q04511 668 aa4.4□□□□□ -1.7
CTK1YKL139W HUA2Q12134 243 aa4.4□□□□□ -1.7
CTK1YKL139W HSH49Q99181 213 aaPredicted RBP4.4□□□□□ -1.7
CTK1YKL139W SUI3P09064 285 aaKnown RBP4.4□□□□□ -1.71
CTK1YKL139W NOP4P37838 685 aaKnown RBP4.4□□□□□ -1.71
CTK1YKL139W APL3P38065 1025 aa4.4□□□□□ -1.71
CTK1YKL139W ARO9P38840 513 aaPredicted RBP4.4□□□□□ -1.71
CTK1YKL139W LNP1P38878 278 aa4.4□□□□□ -1.71
CTK1YKL139W BUD16P39988 312 aa4.4□□□□□ -1.71
CTK1YKL139W YIL161WP40449 235 aaKnown RBP4.4□□□□□ -1.71
CTK1YKL139W BUD17P53727 317 aa4.4□□□□□ -1.71
CTK1YKL139W RPS15Q01855 142 aaKnown RBP4.4□□□□□ -1.71
CTK1YKL139W RAD30Q04049 632 aa4.4□□□□□ -1.71
CTK1YKL139W TAF11Q04226 346 aa4.4□□□□□ -1.71
CTK1YKL139W YLR287CQ05881 355 aa4.4□□□□□ -1.71
CTK1YKL139W YPL216WQ08964 1102 aa4.4□□□□□ -1.71
CTK1YKL139W YBR126W-AQ8TGU7 68 aa4.4□□□□□ -1.71
CTK1YKL139W VCX1Q99385 411 aa4.4□□□□□ -1.71
CTK1YKL139W CDC5P32562 705 aa4.39□□□□□ -1.71
CTK1YKL139W DEF1P35732 738 aaKnown RBP4.39□□□□□ -1.71
CTK1YKL139W GEX2P36173 615 aa4.39□□□□□ -1.71
CTK1YKL139W CCL1P37366 393 aa4.39□□□□□ -1.71
CTK1YKL139W TDP1P38319 544 aa4.39□□□□□ -1.71
CTK1YKL139W NPR2P39923 615 aa4.39□□□□□ -1.71
CTK1YKL139W THI6P41835 540 aa4.39□□□□□ -1.71
CTK1YKL139W ATG4P53867 494 aa4.39□□□□□ -1.71
CTK1YKL139W RIA1P53893 1110 aa4.39□□□□□ -1.71
CTK1YKL139W TRS23Q03784 219 aa4.39□□□□□ -1.71
CTK1YKL139W NUS1Q12063 375 aa4.39□□□□□ -1.71
CTK1YKL139W SWT1Q12104 458 aa4.39□□□□□ -1.71
CTK1YKL139W NTO1Q12311 748 aa4.39□□□□□ -1.71
Retrieved 100 of 5,963 RNA–protein pairs in 20 ms