RNA–Protein interactions for RNA: YKL112W

ABF1, Transcript of DNA binding protein with possible chromatin-reorganizing activity, yeastyeast

Gene ABF1, Length 2,196 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ABF1YKL112W YCG1Q06680 1035 aa4.8□□□□□ -1.64
ABF1YKL112W TRE2Q08693 809 aa4.8□□□□□ -1.64
ABF1YKL112W YDL109CQ12103 647 aa4.8□□□□□ -1.64
ABF1YKL112W SFI1Q12369 946 aa4.8□□□□□ -1.64
ABF1YKL112W CPA2P03965 1118 aaKnown RBP4.79□□□□□ -1.64
ABF1YKL112W AAC3P18238 307 aa4.79□□□□□ -1.64
ABF1YKL112W CDC42P19073 191 aa4.79□□□□□ -1.64
ABF1YKL112W KAR9P32526 644 aa4.79□□□□□ -1.64
ABF1YKL112W SPF1P39986 1215 aaKnown RBP4.79□□□□□ -1.64
ABF1YKL112W TEL2P53038 688 aa4.79□□□□□ -1.64
ABF1YKL112W KAP114P53067 1004 aa4.79□□□□□ -1.64
ABF1YKL112W MON1P53129 644 aa4.79□□□□□ -1.64
ABF1YKL112W YGR125WP53273 1036 aa4.79□□□□□ -1.64
ABF1YKL112W VPS9P54787 451 aa4.79□□□□□ -1.64
ABF1YKL112W GTR1Q00582 310 aa4.79□□□□□ -1.64
ABF1YKL112W INA17Q02888 182 aa4.79□□□□□ -1.64
ABF1YKL112W ABZ2Q03266 374 aa4.79□□□□□ -1.64
ABF1YKL112W UGO1Q03327 502 aa4.79□□□□□ -1.64
ABF1YKL112W MLC2Q06580 163 aa4.79□□□□□ -1.64
ABF1YKL112W GRS2Q06817 618 aa4.79□□□□□ -1.64
ABF1YKL112W FAP7Q12055 197 aaPredicted RBP4.79□□□□□ -1.64
ABF1YKL112W VPS54Q12071 889 aa4.79□□□□□ -1.64
ABF1YKL112W CHS5Q12114 671 aaKnown RBP4.79□□□□□ -1.64
ABF1YKL112W GYP5Q12344 894 aa4.79□□□□□ -1.64
ABF1YKL112W PGA3Q12746 312 aaKnown RBP4.79□□□□□ -1.64
ABF1YKL112W CMC2Q3E7A4 109 aa4.79□□□□□ -1.64
ABF1YKL112W BI4P03879 638 aa4.78□□□□□ -1.64
ABF1YKL112W PHR1P05066 565 aaKnown RBP RIP-Chip data4.78□□□□□ -1.64not detected
ABF1YKL112W DAL81P21657 970 aa4.78□□□□□ -1.64
ABF1YKL112W SUR1P33300 382 aa4.78□□□□□ -1.64
ABF1YKL112W GDH2P33327 1092 aaKnown RBP4.78□□□□□ -1.64
ABF1YKL112W PTK1P36002 662 aaPredicted RBP4.78□□□□□ -1.64
ABF1YKL112W CST26P38226 397 aa4.78□□□□□ -1.64
ABF1YKL112W RGD1P38339 666 aa4.78□□□□□ -1.64
ABF1YKL112W YHR054CP38780 354 aa4.78□□□□□ -1.64
ABF1YKL112W RAD55P38953 406 aa4.78□□□□□ -1.64
ABF1YKL112W YJL068CP40363 299 aa4.78□□□□□ -1.64
ABF1YKL112W HIS6P40545 261 aa4.78□□□□□ -1.64
ABF1YKL112W CIR1P42940 261 aa4.78□□□□□ -1.64
ABF1YKL112W LIA1P47120 325 aaKnown RBP4.78□□□□□ -1.64
ABF1YKL112W CCH1P50077 2039 aa4.78□□□□□ -1.64
ABF1YKL112W GOR1P53839 350 aa4.78□□□□□ -1.64
ABF1YKL112W NSG2P53898 299 aa4.78□□□□□ -1.64
ABF1YKL112W ESBP6P53918 673 aa4.78□□□□□ -1.64
ABF1YKL112W TIM10P87108 93 aa4.78□□□□□ -1.64
ABF1YKL112W YPL107WQ02873 248 aa4.78□□□□□ -1.64
ABF1YKL112W YML037CQ03703 340 aa4.78□□□□□ -1.64
ABF1YKL112W RVB1Q03940 463 aaKnown RBP4.78□□□□□ -1.64
ABF1YKL112W UTP5Q04177 643 aaKnown RBP4.78□□□□□ -1.64
ABF1YKL112W URC2Q04411 772 aa4.78□□□□□ -1.64
ABF1YKL112W ECM18Q04623 453 aa4.78□□□□□ -1.64
ABF1YKL112W DYN3Q04949 312 aa4.78□□□□□ -1.64
ABF1YKL112W VAC14Q06708 880 aa4.78□□□□□ -1.64
ABF1YKL112W YKL068W-AQ3E826 78 aa4.78□□□□□ -1.64
ABF1YKL112W PRI2P20457 528 aa4.78□□□□□ -1.64
ABF1YKL112W SYN8P31377 255 aa4.78□□□□□ -1.64
ABF1YKL112W NTC20P38302 140 aaPredicted RBP4.78□□□□□ -1.64
ABF1YKL112W YBR242WP38331 238 aa4.78□□□□□ -1.64
ABF1YKL112W YBR287WP38355 427 aa4.78□□□□□ -1.64
ABF1YKL112W RFC3P38629 340 aa4.78□□□□□ -1.64
ABF1YKL112W SEC31P38968 1273 aaKnown RBP4.78□□□□□ -1.64
ABF1YKL112W MPT5P39016 859 aaKnown RBP RIP-Chip data4.78□□□□□ -1.64 RIP-Chip
ABF1YKL112W THO1P40040 218 aaKnown RBP4.78□□□□□ -1.64
ABF1YKL112W LTP1P40347 161 aa4.78□□□□□ -1.64
ABF1YKL112W PCI8P40512 444 aa4.78□□□□□ -1.64
ABF1YKL112W IMA5P40884 581 aa4.78□□□□□ -1.64
ABF1YKL112W YGR012WP53206 393 aa4.78□□□□□ -1.64
ABF1YKL112W KTR6P54070 446 aa4.78□□□□□ -1.64
ABF1YKL112W EGD1Q02642 157 aaKnown RBP4.78□□□□□ -1.64
ABF1YKL112W DML1Q03652 475 aa4.78□□□□□ -1.64
ABF1YKL112W PLP1Q04004 230 aa4.78□□□□□ -1.64
ABF1YKL112W BSC2Q05611 235 aa4.78□□□□□ -1.64
ABF1YKL112W YLR345WQ06137 509 aa4.78□□□□□ -1.64
ABF1YKL112W RBD2Q12270 262 aa4.78□□□□□ -1.64
ABF1YKL112W GIS3Q12418 502 aa4.78□□□□□ -1.64
ABF1YKL112W ADH4P10127 382 aa4.77□□□□□ -1.65
ABF1YKL112W MSS116P15424 664 aaKnown RBP4.77□□□□□ -1.65
ABF1YKL112W KGD2P19262 463 aaPredicted RBP4.77□□□□□ -1.65
ABF1YKL112W PRS1P32895 427 aaKnown RBP4.77□□□□□ -1.65
ABF1YKL112W YIL092WP40497 633 aa4.77□□□□□ -1.65
ABF1YKL112W YDL183CP48569 320 aa4.77□□□□□ -1.65
ABF1YKL112W STB4P50104 949 aa4.77□□□□□ -1.65
ABF1YKL112W YGL117WP53133 265 aa4.77□□□□□ -1.65
ABF1YKL112W PBP1P53297 722 aaKnown RBP4.77□□□□□ -1.65
ABF1YKL112W MNT4P53745 580 aa4.77□□□□□ -1.65
ABF1YKL112W RLI1Q03195 608 aaKnown RBP4.77□□□□□ -1.65
ABF1YKL112W HMO1Q03973 246 aaKnown RBP4.77□□□□□ -1.65
ABF1YKL112W VBA4Q04602 768 aaKnown RBP4.77□□□□□ -1.65
ABF1YKL112W RPS9AO13516 197 aaKnown RBP4.77□□□□□ -1.65
ABF1YKL112W RPP2BP02400 110 aaKnown RBP4.77□□□□□ -1.65
ABF1YKL112W CDC36P06100 191 aaPredicted RBP4.77□□□□□ -1.65
ABF1YKL112W PDC1P06169 563 aaKnown RBP4.77□□□□□ -1.65
ABF1YKL112W CYC8P14922 966 aa4.77□□□□□ -1.65
ABF1YKL112W RDS2P19541 446 aaKnown RBP4.77□□□□□ -1.65
ABF1YKL112W BAS1P22035 811 aa4.77□□□□□ -1.65
ABF1YKL112W RER1P25560 188 aa4.77□□□□□ -1.65
ABF1YKL112W FUN30P31380 1131 aa4.77□□□□□ -1.65
ABF1YKL112W GYP6P32806 458 aa4.77□□□□□ -1.65
ABF1YKL112W CPR5P35176 225 aa4.77□□□□□ -1.65
ABF1YKL112W SIF2P38262 535 aa4.77□□□□□ -1.65
Retrieved 100 of 5,963 RNA–protein pairs in 11.2 ms